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CLNS1A
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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:86.0TPM
GTEx:14.7RPKM
FANTOM5:72.3Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA031707

 

Antibody HPA031708

 

Antibody HPA032045

 

Antibody CAB017840

 

Cells in red pulp

Low   Medium   Not detected   Not detected  

Cells in white pulp

Medium   Medium   Not detected   Not detected  
       
       
       

SPLEEN - HPA RNA-seq

Average TPM

86.0

overview Female, age 60
Sample 1
TPM: 74.8
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 70.0
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 94.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 80.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 109.9
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

14.7

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 14.7
Samples: 104

Max RPKM: 22.3
Min RPKM: 9.6
Std RPKM: 2.2
Median RPKM: 14.7
GTEX-13N11-0126-SM-5KM2Z 22.3
GTEX-146FR-1926-SM-5NQA6 20.3
GTEX-Y5LM-0326-SM-4VBRN 20.0
GTEX-ZYWO-0226-SM-5GZX3 18.9
GTEX-11XUK-0426-SM-5EQML 18.6
GTEX-R55G-0226-SM-48FEI 18.6
GTEX-13FH7-1326-SM-5IFG8 18.1
GTEX-O5YT-0926-SM-48TDG 18.0
GTEX-QLQW-0126-SM-447BK 17.3
GTEX-1399S-0226-SM-5IFFG 17.2
GTEX-14DAR-0326-SM-5S2PS 17.2
GTEX-U4B1-0526-SM-4DXTK 17.2
GTEX-YEC4-0126-SM-4W21T 17.0
GTEX-11DXX-0726-SM-5H12X 16.8
GTEX-12WSJ-0526-SM-5GCOZ 16.7
GTEX-Q2AH-0226-SM-48U1I 16.7
GTEX-13CF3-0226-SM-5J1NW 16.5
GTEX-QCQG-0226-SM-48U28 16.5
GTEX-QV31-0126-SM-447BP 16.5
GTEX-XGQ4-0126-SM-4AT4H 16.5
GTEX-11NSD-0426-SM-5N9CR 16.2
GTEX-11P81-1326-SM-5GU5S 16.2
GTEX-139T6-0226-SM-5IFGZ 16.2
GTEX-14E6E-1226-SM-5S2R5 16.1
GTEX-144GN-2126-SM-5O99D 16.0
GTEX-XUJ4-0226-SM-4BOP8 16.0
GTEX-ZP4G-0326-SM-4YCEF 16.0
GTEX-ZDTT-1026-SM-5KM19 15.9
GTEX-ZVP2-0526-SM-51MSC 15.9
GTEX-1211K-0426-SM-5FQTP 15.8
GTEX-131XE-1126-SM-5EGHW 15.8
GTEX-13X6H-0726-SM-5Q5BX 15.8
GTEX-146FQ-0626-SM-5LU9U 15.8
GTEX-147F3-0126-SM-5NQBJ 15.7
GTEX-U3ZH-0126-SM-4DXUK 15.7
GTEX-13U4I-1626-SM-5IFFR 15.6
GTEX-ZYFG-0726-SM-5GIDX 15.5
GTEX-X4LF-0226-SM-4QAS8 15.3
GTEX-QMRM-0226-SM-4R1K7 15.2
GTEX-Y3I4-0126-SM-4TT26 15.1
GTEX-YFCO-0926-SM-5LUA5 15.1
GTEX-ZVZP-0726-SM-59HKA 15.0
GTEX-11VI4-0126-SM-5GU6Z 14.9
GTEX-12BJ1-0726-SM-5EGGF 14.9
GTEX-13PVR-0326-SM-5RQJY 14.9
GTEX-W5WG-0626-SM-4SOID 14.9
GTEX-XMK1-0126-SM-4B65F 14.9
GTEX-ZZPU-0126-SM-5E446 14.9
GTEX-VJYA-0126-SM-4KL1P 14.8
GTEX-ZAB5-0526-SM-5CVMU 14.8
GTEX-12WSK-0126-SM-5GCO7 14.7
GTEX-RUSQ-0126-SM-47JWV 14.7
GTEX-WHWD-0126-SM-4OORS 14.7
GTEX-ZLFU-0526-SM-4WWBN 14.7
GTEX-XV7Q-0126-SM-4BRVK 14.5
GTEX-ZPU1-1026-SM-4YCEQ 14.5
GTEX-XXEK-0126-SM-4BRVU 14.3
GTEX-1122O-0526-SM-5N9DM 14.2
GTEX-12WSN-0126-SM-5DUX5 14.2
GTEX-U3ZN-0126-SM-4DXUM 14.2
GTEX-Y8LW-0126-SM-4VBS1 14.2
GTEX-P4PP-0926-SM-48TBZ 14.1
GTEX-XAJ8-0126-SM-47JYG 14.1
GTEX-13PL7-1126-SM-5MR5O 14.0
GTEX-OOBJ-0926-SM-48TDO 14.0
GTEX-XPVG-0626-SM-4B65B 14.0
GTEX-P4QS-0926-SM-48TBS 13.9
GTEX-11LCK-0126-SM-5A5M5 13.8
GTEX-11P7K-0426-SM-5BC5H 13.8
GTEX-S4Z8-0226-SM-4AD5K 13.8
GTEX-ZLWG-0426-SM-4WWFA 13.8
GTEX-YB5K-1926-SM-4VDT4 13.7
GTEX-X3Y1-0126-SM-4PQZA 13.6
GTEX-1399R-0226-SM-5IJGG 13.5
GTEX-OIZH-0926-SM-48TBR 13.5
GTEX-117YX-2126-SM-5GIEL 13.4
GTEX-13VXT-1326-SM-5LU3Y 13.4
GTEX-POMQ-0126-SM-48TD6 13.4
GTEX-131XG-0426-SM-5IFGD 13.3
GTEX-132QS-0226-SM-5IFFZ 13.3
GTEX-T5JW-0126-SM-4DM6K 13.3
GTEX-XQ8I-1726-SM-4BOQB 13.2
GTEX-Z9EW-0726-SM-5HL9H 13.0
GTEX-ZV6S-0826-SM-5NQ6Z 13.0
GTEX-11EQ9-0426-SM-5A5JY 12.9
GTEX-Y114-0726-SM-4TT6U 12.8
GTEX-145MN-0126-SM-5RQHY 12.7
GTEX-QDVN-0526-SM-48TZ4 12.7
GTEX-S3XE-0626-SM-4AD6B 12.7
GTEX-WFON-0126-SM-4LVM9 12.4
GTEX-13111-0126-SM-5EGHO 12.0
GTEX-PLZ6-0126-SM-48TC6 12.0
GTEX-QV44-0126-SM-4R1KH 12.0
GTEX-UJHI-0126-SM-4IHLP 11.9
GTEX-PX3G-0926-SM-48U12 11.8
GTEX-YB5E-0426-SM-5IFHR 11.8
GTEX-12WSG-0926-SM-5EGIH 11.6
GTEX-PW2O-0126-SM-48TC8 11.5
GTEX-139YR-0426-SM-5IFFV 11.1
GTEX-UPK5-1626-SM-4JBHI 10.8
GTEX-Q734-0226-SM-48U1A 10.2
GTEX-Y3IK-0126-SM-4WWE9 10.2
GTEX-X585-1826-SM-4QAS3 9.7
GTEX-13S86-0126-SM-5S2PI 9.6
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

72.3

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 72.3
FF:10025-101D7 39,50,70 years, male 72.3

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