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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ATP2A3
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:11.5TPM
GTEx:21.6RPKM
FANTOM5:7.4Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA007180

 

Antibody CAB010882

 

Glandular cells

Medium   Low  
   
   
   

PROSTATE - HPA RNA-seq

Average TPM

11.5

overview Male, age 62
Sample 1
TPM: 9.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 12.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 18.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 12.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 6.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 23.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 10.1
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 5.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 5.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

21.6

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 21.6
Samples: 106

Max RPKM: 81.4
Min RPKM: 2.8
Std RPKM: 14
Median RPKM: 16.7
GTEX-WOFM-0326-SM-4OOSL 81.4
GTEX-Y8E4-2126-SM-5RQHO 65.5
GTEX-11TT1-2026-SM-5EQM8 63.6
GTEX-S4Q7-1026-SM-4AD75 58.4
GTEX-SNOS-1026-SM-4DM4Y 58.3
GTEX-ZTX8-1026-SM-5EGHD 51.5
GTEX-S33H-1826-SM-4AD65 43.5
GTEX-RWSA-2026-SM-47JX8 43.0
GTEX-Q2AI-1126-SM-48U19 40.2
GTEX-U4B1-1426-SM-4DXTX 40.0
GTEX-WFG8-1826-SM-4LVM4 39.1
GTEX-XMK1-1026-SM-4B65H 39.0
GTEX-XQ3S-2526-SM-4BOOG 38.7
GTEX-139T6-1526-SM-5P9G6 36.8
GTEX-WFG7-1826-SM-3GIL1 35.8
GTEX-ZZ64-0926-SM-5E44L 34.6
GTEX-PLZ6-1126-SM-3P5ZR 33.6
GTEX-145LV-1226-SM-5S2QH 33.1
GTEX-145LT-0626-SM-5O99E 32.4
GTEX-U3ZM-0926-SM-4DXSW 31.7
GTEX-132NY-2826-SM-5P9G2 31.5
GTEX-14E6E-1126-SM-5S2R4 31.5
GTEX-ZT9W-1626-SM-4YCDQ 31.1
GTEX-XOTO-2826-SM-4B65I 30.6
GTEX-SNMC-0926-SM-4DM5U 29.5
GTEX-11NSD-0826-SM-5986S 29.0
GTEX-13FTW-1226-SM-5LZZ1 28.7
GTEX-11P82-1126-SM-5BC5K 28.6
GTEX-YF7O-1926-SM-4W1YQ 26.9
GTEX-WZTO-0926-SM-4PQZ3 25.9
GTEX-OOBJ-2026-SM-3NB1R 25.3
GTEX-ZY6K-1526-SM-5GZXE 24.6
GTEX-132QS-1126-SM-5P9GC 23.3
GTEX-117YX-1526-SM-5H12T 23.1
GTEX-SJXC-2026-SM-4DM6N 22.1
GTEX-X5EB-1826-SM-4E3K8 21.2
GTEX-QLQ7-1326-SM-4R1JY 20.9
GTEX-ZPU1-2026-SM-57WFI 20.9
GTEX-WH7G-1726-SM-4LVKY 20.6
GTEX-S95S-1026-SM-4B64M 20.5
GTEX-111FC-2026-SM-5GZYO 20.3
GTEX-WFON-1626-SM-4LVMV 20.1
GTEX-12C56-1326-SM-5FQSV 20.0
GTEX-ZLFU-1726-SM-4WWBU 19.9
GTEX-OIZH-2026-SM-3NB1M 19.1
GTEX-1399R-0526-SM-5IJEF 18.9
GTEX-12BJ1-1226-SM-5LUAE 18.7
GTEX-UTHO-2726-SM-4JBH9 18.6
GTEX-Y9LG-1826-SM-4VBQC 18.6
GTEX-11DYG-2526-SM-5N9BB 17.2
GTEX-ZVP2-0826-SM-59HJ6 17.1
GTEX-11TUW-2126-SM-5GU7B 16.9
GTEX-WK11-2626-SM-4OOSK 16.7
GTEX-XPVG-2026-SM-4B65E 16.7
GTEX-13O61-1726-SM-5KM46 16.6
GTEX-11O72-2726-SM-5HL6K 15.8
GTEX-13N2G-1826-SM-5KM1I 15.6
GTEX-QMRM-1426-SM-4R1K8 15.6
GTEX-T8EM-1826-SM-4DM7F 15.6
GTEX-13FHO-2826-SM-5K7ZA 15.5
GTEX-ZDYS-1226-SM-5IJF3 15.1
GTEX-11P7K-0626-SM-5985Z 14.9
GTEX-12ZZZ-2026-SM-5LZWJ 14.9
GTEX-VJYA-1226-SM-3GIJ6 14.6
GTEX-11OF3-1726-SM-5GU5Q 14.4
GTEX-13FXS-2826-SM-5LZYC 14.4
GTEX-QV31-1026-SM-4R1K3 14.4
GTEX-1399T-1226-SM-5P9J5 14.1
GTEX-NFK9-2226-SM-3MJGP 14.1
GTEX-V1D1-1926-SM-4JBGX 14.1
GTEX-131XF-1926-SM-5DUW4 14.0
GTEX-111YS-1726-SM-5GIED 13.9
GTEX-117YW-1426-SM-5EGGO 13.9
GTEX-U8XE-2526-SM-4E3IT 13.7
GTEX-XAJ8-0626-SM-47JY4 13.6
GTEX-14ABY-0726-SM-5Q5DF 13.5
GTEX-QEG4-2226-SM-4R1JM 13.5
GTEX-QV44-1526-SM-4R1KI 13.5
GTEX-13OW8-0426-SM-5J2NR 13.4
GTEX-111CU-1526-SM-5N9FS 13.3
GTEX-11EQ9-1726-SM-5HL6U 13.3
GTEX-11WQK-2726-SM-5EQMU 13.0
GTEX-11ZUS-2126-SM-5N9E6 12.9
GTEX-YJ8A-1126-SM-5IFJU 12.8
GTEX-YB5E-1826-SM-5IFI4 12.4
GTEX-XGQ4-1826-SM-4AT6F 12.2
GTEX-14BMV-2326-SM-5RQJ4 11.8
GTEX-146FQ-1726-SM-5QGPX 11.3
GTEX-REY6-2126-SM-48FD9 11.2
GTEX-144GM-0826-SM-5O98R 11.1
GTEX-U412-2026-SM-4DXSI 10.7
GTEX-13G51-2326-SM-5LZXV 10.6
GTEX-148VJ-1826-SM-5Q5DV 9.6
GTEX-ZUA1-2826-SM-59HLE 8.9
GTEX-ZTTD-2726-SM-57WFA 8.8
GTEX-V955-1826-SM-4JBIL 8.6
GTEX-13111-1326-SM-5GCNO 8.4
GTEX-13O21-1126-SM-5N9EV 7.7
GTEX-RM2N-1126-SM-48FCY 7.4
GTEX-S3XE-1326-SM-4AD4H 6.9
GTEX-13NYS-1026-SM-5KLZT 6.2
GTEX-OOBK-2025-SM-3LK5S 5.5
GTEX-NPJ8-2426-SM-3MJHL 4.6
GTEX-14C5O-2826-SM-5RQI6 3.4
GTEX-13RTJ-2126-SM-5S2PZ 3.1
GTEX-12696-2226-SM-5EQ65 2.8
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

7.4

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 7.4
FF:10022-101D4 73,79,93 years, male 7.4

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