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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:261.9TPM
GTEx:55.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:High
Neuronal cells:High
Neuropil:Not detected
 

Antibody staining

Antibody HPA019004

 

Antibody HPA073666

 

Endothelial cells

Not detected   Not detected  

Glial cells

High   High  

Neuronal cells

Low   High  

Neuropil

Low   Not detected  
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

261.9

N/A Male, age 5
Sample 1
TPM: 197.5
overview Female, age 40
Sample 2
TPM: 404.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 184.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

55.7

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 51.7
Samples: 114

Max RPKM: 95.2
Min RPKM: 15.1
Std RPKM: 14.3
Median RPKM: 50
GTEX-ZE7O-3126-SM-5HL5X 95.2
GTEX-139T8-1026-SM-5J2MC 90.3
GTEX-11TTK-2926-SM-5PNYP 89.7
GTEX-RU72-3026-SM-5SI7Y 85.7
GTEX-PWO3-0926-SM-2I5EY 83.8
GTEX-13X6K-2926-SM-5Q5D5 78.8
GTEX-11OC5-0726-SM-5P9JK 76.8
GTEX-13OW7-3026-SM-5L3GY 75.3
GTEX-11EI6-3026-SM-5GZZO 72.7
GTEX-12WSD-3126-SM-5HL7P 72.2
GTEX-14A5I-2926-SM-5Q5CQ 71.7
GTEX-131XW-3126-SM-5LZUC 71.3
GTEX-11GSP-3226-SM-5986O 70.5
GTEX-13OVJ-2826-SM-5L3GW 70.4
GTEX-13X6J-3026-SM-5Q5CU 69.2
GTEX-13JVG-3126-SM-5L3FH 68.9
GTEX-OXRN-2426-SM-2I5EQ 68.4
GTEX-QMR6-1426-SM-32PLA 68.0
GTEX-QVUS-2826-SM-3GADB 68.0
GTEX-12ZZZ-3026-SM-5BC67 64.8
GTEX-QVJO-1426-SM-2S1QY 64.8
GTEX-12ZZW-2926-SM-5LZUP 62.8
GTEX-1445S-3026-SM-5O9BR 62.5
GTEX-ZVT3-3026-SM-5E43N 61.9
GTEX-144FL-3026-SM-5O99C 61.8
GTEX-145MG-3026-SM-5RQJA 61.2
GTEX-13IVO-2926-SM-5L3CZ 60.1
GTEX-Y8DK-0826-SM-4TT3T 59.6
GTEX-1399T-3026-SM-5KLZC 58.7
GTEX-13PL6-3126-SM-5LUAR 58.5
GTEX-XLM4-3026-SM-4AT6L 56.8
GTEX-11WQK-3026-SM-5EQL6 56.4
GTEX-TSE9-3026-SM-3DB76 56.3
GTEX-11EMC-3226-SM-5EGKW 56.2
GTEX-R55F-1326-SM-5S2V4 55.0
GTEX-144GL-3026-SM-5Q5CW 54.7
GTEX-14ASI-3026-SM-5S2PN 54.7
GTEX-11O72-2926-SM-5BC4V 54.5
GTEX-13JUV-2926-SM-5LZX7 54.4
GTEX-11NV4-2126-SM-5N9DS 54.3
GTEX-ZAK1-3026-SM-5S2MJ 54.2
GTEX-X4XX-3026-SM-3NMB2 54.0
GTEX-13NYC-2826-SM-5K7WR 53.9
GTEX-13S7M-3126-SM-5RQJQ 53.8
GTEX-1128S-2726-SM-5H12C 53.4
GTEX-11PRG-2926-SM-5987A 53.2
GTEX-13O3O-3126-SM-5KM3H 53.0
GTEX-1192X-3126-SM-5N9BY 52.1
GTEX-NPJ7-2726-SM-2I3FT 51.9
GTEX-YJ89-3026-SM-5IFJI 51.7
GTEX-11NUK-2926-SM-5A5MD 51.6
GTEX-13NYS-3126-SM-5KLYV 51.5
GTEX-131YS-3126-SM-5KLYT 50.9
GTEX-RNOR-2326-SM-2TF4I 50.9
GTEX-ZZPT-3026-SM-5GZXH 50.8
GTEX-11GSO-2926-SM-5HL73 50.3
GTEX-13QIC-2926-SM-5J2NF 50.1
GTEX-147GR-3026-SM-5S2ML 50.0
GTEX-13FHO-3026-SM-5J1O9 49.8
GTEX-132Q8-3026-SM-5PNVG 49.4
GTEX-QDT8-2926-SM-32PKC 49.3
GTEX-145LS-3126-SM-5Q5BY 49.2
GTEX-13OW8-2826-SM-5L3GC 49.0
GTEX-14BMV-3026-SM-5S2PQ 48.6
GTEX-11DXW-1126-SM-5H12Q 48.5
GTEX-1117F-3226-SM-5N9CT 48.4
GTEX-13NYB-3026-SM-5IJD7 48.3
GTEX-13O3Q-2926-SM-5KM45 47.8
GTEX-WVLH-3026-SM-3MJG9 47.3
GTEX-X585-3026-SM-46MWF 47.2
GTEX-WZTO-2926-SM-3NM9I 47.0
GTEX-13OW6-3026-SM-5J2MI 46.8
GTEX-ZUA1-3026-SM-59HJC 46.8
GTEX-11DXY-3226-SM-5GIDE 46.7
GTEX-13PVQ-3026-SM-5SI93 46.4
GTEX-111FC-3126-SM-5GZZ2 46.1
GTEX-UTHO-3026-SM-3GAFB 45.6
GTEX-12WSH-3026-SM-5CVNI 45.5
GTEX-13FHP-3026-SM-5IJBS 44.6
GTEX-Y111-2726-SM-4TT3N 43.3
GTEX-11ONC-2926-SM-5P9JM 42.8
GTEX-13FXS-3126-SM-5J2NN 42.7
GTEX-PVOW-2526-SM-2XCF7 42.6
GTEX-T2IS-3026-SM-32QPM 42.5
GTEX-145MF-2726-SM-5O995 42.3
GTEX-WWYW-3126-SM-3NB39 42.1
GTEX-12WSA-2926-SM-5EQ4D 40.6
GTEX-12ZZX-2926-SM-5GCOQ 40.6
GTEX-12WSC-3026-SM-5GCNF 40.5
GTEX-ZYFD-3026-SM-5E44C 40.5
GTEX-12126-1026-SM-5P9JJ 39.6
GTEX-NPJ8-1526-SM-2D7VU 39.6
GTEX-Q2AG-2926-SM-2HMJ3 39.6
GTEX-13FLW-1426-SM-5K7YE 39.5
GTEX-13OVH-3026-SM-5MR4N 39.5
GTEX-13SLX-3126-SM-5S2Q5 39.1
GTEX-145MH-3026-SM-5Q5DZ 38.5
GTEX-YFC4-3126-SM-5PNV6 38.5
GTEX-117XS-3026-SM-5N9CA 37.9
GTEX-12ZZY-3026-SM-5GCOU 37.8
GTEX-T6MN-2626-SM-32PMQ 37.4
GTEX-XOTO-3026-SM-4B65M 36.1
GTEX-T5JC-2426-SM-3NMDB 33.9
GTEX-WHSE-3026-SM-3P5ZH 33.7
GTEX-13G51-3026-SM-5IJB8 32.9
GTEX-13VXU-2926-SM-5LU5C 32.7
GTEX-N7MT-1126-SM-5SI7V 32.7
GTEX-Z93S-2926-SM-57WB9 32.6
GTEX-1313W-3126-SM-5LZUI 30.4
GTEX-11GS4-3126-SM-5A5LH 30.1
GTEX-11ZUS-2926-SM-5FQSL 29.0
GTEX-ZAJG-3126-SM-5HL9J 28.5
GTEX-WL46-2926-SM-3LK82 27.6
GTEX-11OF3-2926-SM-5HL78 15.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 59.9
Samples: 108

Max RPKM: 171.8
Min RPKM: 30.3
Std RPKM: 20.7
Median RPKM: 53.9
GTEX-12WSD-0011-R10b-SM-5GU79 171.8
GTEX-139TS-0011-R10a-SM-5K7TU 128.8
GTEX-1445S-0011-R10a-SM-5PNWB 114.7
GTEX-P44H-0011-R10A-SM-2XCEK 100.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 98.5
GTEX-11WQC-0011-R10a-SM-57WCT 95.2
GTEX-QVUS-0011-R10A-SM-3GIK3 89.1
GTEX-13SLW-0011-R10a-SM-5S2UI 89.0
GTEX-ZV68-0011-R10a-SM-51MT7 88.2
GTEX-1477Z-0011-R10b-SM-5S2RF 85.9
GTEX-11WQK-0011-R10a-SM-5BC6R 85.7
GTEX-QMR6-0011-R10A-SM-32PKO 83.2
GTEX-11GSP-0011-R10a-SM-5NQ7J 81.6
GTEX-TSE9-0011-R10A-SM-3DB7O 81.2
GTEX-13OW8-0011-R10a-SM-5L3H6 79.6
GTEX-11H98-0011-R10b-SM-5NQ98 79.3
GTEX-NL4W-0011-R10A-SM-2I3DY 79.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 78.8
GTEX-13JUV-0011-R10b-SM-5LZXR 76.9
GTEX-14753-0011-R10b-SM-5S2WE 74.8
GTEX-ZVT3-0011-R10b-SM-57WB6 73.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 73.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 73.1
GTEX-OXRN-0011-R10A-SM-2I5GC 71.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 70.7
GTEX-145LU-0011-R10a-SM-5PNWJ 70.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 70.1
GTEX-13JVG-0011-R10b-SM-5KM2P 70.0
GTEX-13FLV-0011-R10b-SM-5LZZ2 68.0
GTEX-QDT8-0011-R10A-SM-32PKG 67.9
GTEX-131XW-0011-R10a-SM-5DUVA 67.3
GTEX-14BIL-0011-R10a-SM-5SI75 67.1
GTEX-13FXS-0011-R10a-SM-5J2MA 65.9
GTEX-12126-0011-R10b-SM-5BC6T 65.1
GTEX-13FHO-0011-R10b-SM-5J2MM 64.5
GTEX-OXRO-0011-R10A-SM-2I5EH 63.6
GTEX-ZUA1-0011-R10a-SM-51MT6 63.1
GTEX-147F4-0011-R10b-SM-5S2WC 63.0
GTEX-YJ89-0011-R10a-SM-4SOK9 62.7
GTEX-ZXG5-0011-R10a-SM-57WDD 60.7
GTEX-13N2G-0011-R10a-SM-5MR34 59.6
GTEX-X4EP-0011-R10B-SM-4QASJ 59.2
GTEX-13X6I-0011-R10a-SM-5PNWI 57.9
GTEX-XLM4-0011-R10A-SM-4AT5P 57.7
GTEX-13NYS-0011-R10a-SM-5MR4S 57.4
GTEX-13QJC-0011-R10a-SM-5SI63 57.1
GTEX-145MG-0011-R10a-SM-5PNWG 56.5
GTEX-12WSA-0011-R10b-SM-5P9ET 55.9
GTEX-13O3O-0011-R10a-SM-5LUA9 55.8
GTEX-13NYB-0011-R10a-SM-5KM43 55.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 55.5
GTEX-ZF28-0011-R10a-SM-4WWEH 55.3
GTEX-13X6K-0011-R10a-SM-5P9JR 54.1
GTEX-X261-0011-R10B-SM-4E3JT 54.1
GTEX-13OW6-0011-R10a-SM-5L3HE 53.8
GTEX-RVPU-0011-R10A-SM-2XCAH 53.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 53.4
GTEX-13CZV-0011-R10b-SM-5LZYD 53.0
GTEX-147GR-0011-R10b-SM-5S2UM 52.9
GTEX-13NZA-0011-R10b-SM-5KM54 52.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 52.5
GTEX-13G51-0011-R10b-SM-5LZYF 52.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 52.2
GTEX-QVJO-0011-R10A-SM-2S1QJ 52.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 51.6
GTEX-N7MS-0011-R10A-SM-2HMJK 51.2
GTEX-12WSM-0011-R10a-SM-5DUWV 50.7
GTEX-X4XX-0011-R10B-SM-46MWO 50.5
GTEX-131XH-0011-R10a-SM-5EGLJ 50.3
GTEX-13S7M-0011-R10b-SM-5PNZB 50.3
GTEX-13OVL-0011-R10a-SM-5L3GS 50.1
GTEX-14BIN-0011-R10a-SM-5S2UA 49.8
GTEX-12WSF-0011-R10a-SM-5LZVH 49.7
GTEX-13X6J-0011-R10b-SM-5PNWA 49.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 49.6
GTEX-13OW7-0011-R10a-SM-5L3H3 48.1
GTEX-145LS-0011-R10a-SM-5PNUQ 47.9
GTEX-Z93S-0011-R10a-SM-4RGNM 47.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 47.0
GTEX-12WSH-0011-R10a-SM-5LZUS 46.8
GTEX-13O3Q-0011-R10b-SM-5KM39 46.4
GTEX-13QIC-0011-R10a-SM-5O9C7 46.4
GTEX-WVLH-0011-R10A-SM-3MJFM 46.2
GTEX-XMD1-0011-R10A-SM-4AT4A 46.1
GTEX-S7SE-0011-R10A-SM-2XCDF 45.5
GTEX-T6MN-0011-R10A-SM-32QP7 45.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 45.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 44.5
GTEX-T5JC-0011-R10A-SM-32PM2 43.9
GTEX-WWYW-0011-R10A-SM-3NB35 43.8
GTEX-YFC4-0011-R10a-SM-4SOK5 43.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 43.3
GTEX-13FLW-0011-R10b-SM-5LZZF 42.5
GTEX-131YS-0011-R10b-SM-5EQ5N 42.4
GTEX-N7MT-0011-R10A-SM-2I3E1 42.2
GTEX-12WSC-0011-R10a-SM-5GU57 41.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 40.8
GTEX-13IVO-0011-R10a-SM-5LZY3 40.3
GTEX-13N1W-0011-R10b-SM-5MR4H 40.1
GTEX-X585-0011-R10A-SM-46MUY 38.6
GTEX-11ZUS-0011-R10b-SM-5BC79 37.4
GTEX-145MH-0011-R10b-SM-5PNUK 35.7
GTEX-13SLX-0011-R10a-SM-5P9HV 35.4
GTEX-WZTO-0011-R10B-SM-4E3KB 35.4
GTEX-WL46-0011-R10A-SM-3MJFQ 34.7
GTEX-NL3H-0011-R10A-SM-2I3E9 34.6
GTEX-1313W-0011-R10b-SM-5DUXA 31.5
GTEX-12WSE-0011-R10b-SM-5P9JV 30.3
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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