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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:287.7TPM
GTEx:38.8RPKM
FANTOM5:254.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA019004

 

Antibody HPA073666

 

Glandular cells

Medium   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

287.7

overview Male, age 65
Sample 1
TPM: 206.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 442.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 286.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 215.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

38.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 38.8
Samples: 88

Max RPKM: 99.1
Min RPKM: 16.1
Std RPKM: 16
Median RPKM: 36.7
GTEX-ZXES-1526-SM-5NQ95 99.1
GTEX-111YS-1426-SM-5GID8 83.2
GTEX-13PL7-2626-SM-5IFH4 79.5
GTEX-ZTSS-0926-SM-59865 70.7
GTEX-11DXZ-1326-SM-5H11X 69.5
GTEX-13D11-0726-SM-5LZZB 65.2
GTEX-XBED-1426-SM-4AT4G 60.6
GTEX-ZEX8-1826-SM-57WBH 60.4
GTEX-ZYWO-1526-SM-5SIAL 59.6
GTEX-1399R-2026-SM-5K7WN 59.2
GTEX-145LT-1026-SM-5LU9O 56.5
GTEX-YEC4-1726-SM-4W21E 55.2
GTEX-YB5E-1526-SM-5IFIE 54.8
GTEX-XGQ4-1326-SM-4GIDU 53.8
GTEX-133LE-1426-SM-5IFH1 52.4
GTEX-ZYFG-2026-SM-5E43Y 52.1
GTEX-ZPCL-1726-SM-57WEO 51.3
GTEX-ZLFU-1526-SM-4WWBT 51.3
GTEX-139YR-2226-SM-5IFFW 51.0
GTEX-ZVZP-1826-SM-5GZXB 49.9
GTEX-11EQ9-1326-SM-5985X 48.7
GTEX-11P7K-1626-SM-5GU63 48.0
GTEX-ZTX8-0526-SM-59HLD 46.9
GTEX-11DXX-1626-SM-5H11H 46.8
GTEX-131XF-1326-SM-5GCMQ 46.5
GTEX-13FTW-2026-SM-5IJE2 46.4
GTEX-14DAR-1426-SM-5RQIR 46.4
GTEX-X5EB-1626-SM-4E3IV 45.8
GTEX-ZLV1-1126-SM-4WWBW 44.8
GTEX-1122O-1326-SM-5H11F 43.6
GTEX-ZTPG-2626-SM-57WFX 43.6
GTEX-Y9LG-1626-SM-5IFHM 42.7
GTEX-XUZC-1426-SM-4BRV3 41.8
GTEX-14E6E-1626-SM-5RQI7 41.4
GTEX-WQUQ-2426-SM-4MVNW 40.1
GTEX-YF7O-1826-SM-5IFIU 40.1
GTEX-11I78-1126-SM-5A5K5 39.2
GTEX-XXEK-1026-SM-4BRUW 39.1
GTEX-Y5LM-1626-SM-4VDTB 38.7
GTEX-1399S-2026-SM-5KM4B 38.5
GTEX-11P82-0826-SM-5P9GU 38.5
GTEX-ZZ64-0526-SM-5GZXM 37.5
GTEX-13RTK-0826-SM-5Q5C6 37.4
GTEX-WFJO-0926-SM-4LVM2 36.8
GTEX-13113-1226-SM-5EGHT 36.6
GTEX-ZA64-1226-SM-5HL7B 36.1
GTEX-13O61-1326-SM-5KM31 35.7
GTEX-ZPIC-2326-SM-57WDW 35.6
GTEX-11NSD-1726-SM-5N9C3 34.8
GTEX-WFG8-1626-SM-4LVMB 34.6
GTEX-12BJ1-1926-SM-5HL9Z 33.7
GTEX-13O21-1026-SM-5IJDU 32.9
GTEX-13FH7-1226-SM-5IJFK 32.5
GTEX-ZVP2-1726-SM-5GU5P 31.5
GTEX-ZVT2-2126-SM-5NQ93 30.8
GTEX-13CF3-1226-SM-5LZXN 30.7
GTEX-ZP4G-1626-SM-57WGD 29.6
GTEX-139T6-1026-SM-5IJGC 29.5
GTEX-Y3IK-1726-SM-4YCCR 29.2
GTEX-XAJ8-0526-SM-47JYK 27.8
GTEX-WH7G-1626-SM-4LVMY 27.8
GTEX-13QBU-1926-SM-5IJEW 27.3
GTEX-1399U-2126-SM-5IFEZ 26.8
GTEX-11XUK-1426-SM-5EQMG 26.8
GTEX-Z9EW-0926-SM-5CVMM 26.4
GTEX-WFG7-1726-SM-4LVME 26.4
GTEX-1192X-2526-SM-59868 26.4
GTEX-WRHK-1026-SM-4MVOD 26.3
GTEX-148VJ-2226-SM-5NQ9M 26.0
GTEX-Y114-1426-SM-4TT6W 25.6
GTEX-VJYA-0926-SM-4KL1N 25.6
GTEX-145ME-0926-SM-5O9AR 24.0
GTEX-131XG-1726-SM-5LZUR 24.0
GTEX-12WSK-1526-SM-5CVNO 24.0
GTEX-X15G-1426-SM-4PQZK 23.5
GTEX-11VI4-1626-SM-5EQKO 22.7
GTEX-13OVI-1926-SM-5IJCG 21.2
GTEX-ZQG8-2526-SM-57WEQ 20.8
GTEX-ZF2S-1726-SM-57WFT 20.5
GTEX-UPK5-2026-SM-4JBIM 20.1
GTEX-VUSG-1726-SM-4KKZL 19.9
GTEX-117YX-0326-SM-5GICL 19.8
GTEX-13111-1426-SM-5DUW3 19.3
GTEX-111CU-1326-SM-5NQ8L 18.1
GTEX-ZQUD-0926-SM-57WE3 17.7
GTEX-XMK1-1826-SM-4B66F 17.5
GTEX-ZC5H-2326-SM-4WAYT 16.6
GTEX-WEY5-1526-SM-4LMJF 16.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

254.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 254.7
FF:10024-101D6 15,40,85 years, mixed 254.7

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