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ARHGEF1
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    TISSUE

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    CELL

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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:13.8TPM
GTEx:9.4RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA012924

 

Antibody CAB009502

 

Endothelial cells

Medium   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

13.8

N/A Male, age 5
Sample 1
TPM: 10.0
overview Female, age 40
Sample 2
TPM: 15.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 15.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

9.4

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 11.2
Samples: 114

Max RPKM: 35.6
Min RPKM: 4.7
Std RPKM: 4.5
Median RPKM: 10.3
GTEX-13G51-3026-SM-5IJB8 35.6
GTEX-N7MT-1126-SM-5SI7V 26.2
GTEX-1192X-3126-SM-5N9BY 22.7
GTEX-12ZZY-3026-SM-5GCOU 22.0
GTEX-QVUS-2826-SM-3GADB 19.6
GTEX-NPJ8-1526-SM-2D7VU 19.5
GTEX-13FHP-3026-SM-5IJBS 18.2
GTEX-11GS4-3126-SM-5A5LH 18.1
GTEX-ZAJG-3126-SM-5HL9J 18.1
GTEX-13OW8-2826-SM-5L3GC 17.6
GTEX-12WSA-2926-SM-5EQ4D 17.4
GTEX-X585-3026-SM-46MWF 17.3
GTEX-111FC-3126-SM-5GZZ2 17.0
GTEX-13OVJ-2826-SM-5L3GW 16.6
GTEX-13FHO-3026-SM-5J1O9 16.5
GTEX-1117F-3226-SM-5N9CT 16.3
GTEX-144FL-3026-SM-5O99C 16.1
GTEX-11ONC-2926-SM-5P9JM 15.9
GTEX-12WSD-3126-SM-5HL7P 15.0
GTEX-13NYB-3026-SM-5IJD7 14.9
GTEX-13JUV-2926-SM-5LZX7 14.5
GTEX-13JVG-3126-SM-5L3FH 14.4
GTEX-1445S-3026-SM-5O9BR 14.4
GTEX-13PVQ-3026-SM-5SI93 14.0
GTEX-13OVH-3026-SM-5MR4N 13.9
GTEX-QDT8-2926-SM-32PKC 13.1
GTEX-XLM4-3026-SM-4AT6L 13.1
GTEX-ZZPT-3026-SM-5GZXH 12.8
GTEX-11OF3-2926-SM-5HL78 12.4
GTEX-1399T-3026-SM-5KLZC 12.4
GTEX-13OW6-3026-SM-5J2MI 12.4
GTEX-145LS-3126-SM-5Q5BY 12.3
GTEX-132Q8-3026-SM-5PNVG 12.1
GTEX-13S7M-3126-SM-5RQJQ 12.1
GTEX-13QIC-2926-SM-5J2NF 11.6
GTEX-Q2AG-2926-SM-2HMJ3 11.6
GTEX-1313W-3126-SM-5LZUI 11.5
GTEX-13FLW-1426-SM-5K7YE 11.5
GTEX-YFC4-3126-SM-5PNV6 11.4
GTEX-13NYS-3126-SM-5KLYV 11.1
GTEX-145MF-2726-SM-5O995 11.1
GTEX-139T8-1026-SM-5J2MC 11.0
GTEX-13OW7-3026-SM-5L3GY 11.0
GTEX-T6MN-2626-SM-32PMQ 11.0
GTEX-WL46-2926-SM-3LK82 10.9
GTEX-X4XX-3026-SM-3NMB2 10.9
GTEX-11GSO-2926-SM-5HL73 10.8
GTEX-ZVT3-3026-SM-5E43N 10.7
GTEX-11TTK-2926-SM-5PNYP 10.6
GTEX-11EMC-3226-SM-5EGKW 10.5
GTEX-117XS-3026-SM-5N9CA 10.4
GTEX-11EI6-3026-SM-5GZZO 10.4
GTEX-11GSP-3226-SM-5986O 10.4
GTEX-145MG-3026-SM-5RQJA 10.4
GTEX-147GR-3026-SM-5S2ML 10.4
GTEX-XOTO-3026-SM-4B65M 10.4
GTEX-Y111-2726-SM-4TT3N 10.4
GTEX-13X6K-2926-SM-5Q5D5 10.3
GTEX-QMR6-1426-SM-32PLA 10.2
GTEX-14ASI-3026-SM-5S2PN 10.1
GTEX-13FXS-3126-SM-5J2NN 9.9
GTEX-12ZZW-2926-SM-5LZUP 9.7
GTEX-13PL6-3126-SM-5LUAR 9.6
GTEX-11WQK-3026-SM-5EQL6 9.5
GTEX-T5JC-2426-SM-3NMDB 9.4
GTEX-11O72-2926-SM-5BC4V 9.2
GTEX-PWO3-0926-SM-2I5EY 9.2
GTEX-QVJO-1426-SM-2S1QY 9.2
GTEX-ZAK1-3026-SM-5S2MJ 9.2
GTEX-11DXY-3226-SM-5GIDE 9.1
GTEX-14BMV-3026-SM-5S2PQ 9.1
GTEX-1128S-2726-SM-5H12C 9.0
GTEX-11DXW-1126-SM-5H12Q 9.0
GTEX-13IVO-2926-SM-5L3CZ 9.0
GTEX-13VXU-2926-SM-5LU5C 9.0
GTEX-NPJ7-2726-SM-2I3FT 9.0
GTEX-UTHO-3026-SM-3GAFB 8.9
GTEX-131YS-3126-SM-5KLYT 8.8
GTEX-13O3O-3126-SM-5KM3H 8.8
GTEX-12ZZZ-3026-SM-5BC67 8.6
GTEX-11NUK-2926-SM-5A5MD 8.5
GTEX-11NV4-2126-SM-5N9DS 8.3
GTEX-14A5I-2926-SM-5Q5CQ 8.3
GTEX-RNOR-2326-SM-2TF4I 8.3
GTEX-ZYFD-3026-SM-5E44C 8.3
GTEX-11OC5-0726-SM-5P9JK 8.2
GTEX-11ZUS-2926-SM-5FQSL 8.2
GTEX-12WSC-3026-SM-5GCNF 8.1
GTEX-13SLX-3126-SM-5S2Q5 8.1
GTEX-YJ89-3026-SM-5IFJI 8.1
GTEX-144GL-3026-SM-5Q5CW 7.9
GTEX-145MH-3026-SM-5Q5DZ 7.9
GTEX-R55F-1326-SM-5S2V4 7.9
GTEX-WHSE-3026-SM-3P5ZH 7.9
GTEX-12ZZX-2926-SM-5GCOQ 7.8
GTEX-Y8DK-0826-SM-4TT3T 7.8
GTEX-13O3Q-2926-SM-5KM45 7.7
GTEX-ZE7O-3126-SM-5HL5X 7.7
GTEX-13NYC-2826-SM-5K7WR 7.6
GTEX-WZTO-2926-SM-3NM9I 7.5
GTEX-11PRG-2926-SM-5987A 7.4
GTEX-12126-1026-SM-5P9JJ 7.4
GTEX-131XW-3126-SM-5LZUC 7.4
GTEX-13X6J-3026-SM-5Q5CU 7.4
GTEX-RU72-3026-SM-5SI7Y 7.3
GTEX-ZUA1-3026-SM-59HJC 7.0
GTEX-TSE9-3026-SM-3DB76 6.5
GTEX-T2IS-3026-SM-32QPM 6.4
GTEX-WVLH-3026-SM-3MJG9 6.2
GTEX-WWYW-3126-SM-3NB39 6.1
GTEX-OXRN-2426-SM-2I5EQ 5.6
GTEX-12WSH-3026-SM-5CVNI 5.5
GTEX-Z93S-2926-SM-57WB9 5.5
GTEX-PVOW-2526-SM-2XCF7 4.7
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 7.5
Samples: 108

Max RPKM: 19.7
Min RPKM: 1.9
Std RPKM: 2.8
Median RPKM: 7
GTEX-XMD1-0011-R10A-SM-4AT4A 19.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 14.2
GTEX-13JVG-0011-R10b-SM-5KM2P 13.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 13.4
GTEX-13FLW-0011-R10b-SM-5LZZF 13.3
GTEX-12WSA-0011-R10b-SM-5P9ET 12.8
GTEX-13CZV-0011-R10b-SM-5LZYD 12.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 11.7
GTEX-13OVJ-0011-R10b-SM-5L3HT 11.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 11.3
GTEX-11GSP-0011-R10a-SM-5NQ7J 11.1
GTEX-RVPU-0011-R10A-SM-2XCAH 11.0
GTEX-XLM4-0011-R10A-SM-4AT5P 10.9
GTEX-13OVL-0011-R10a-SM-5L3GS 10.7
GTEX-N7MT-0011-R10A-SM-2I3E1 10.6
GTEX-13OW8-0011-R10a-SM-5L3H6 10.5
GTEX-X585-0011-R10A-SM-46MUY 10.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 9.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 9.9
GTEX-13JUV-0011-R10b-SM-5LZXR 9.8
GTEX-13N2G-0011-R10a-SM-5MR34 9.7
GTEX-1477Z-0011-R10b-SM-5S2RF 9.5
GTEX-1445S-0011-R10a-SM-5PNWB 9.4
GTEX-13SLW-0011-R10a-SM-5S2UI 8.9
GTEX-NL4W-0011-R10A-SM-2I3DY 8.9
GTEX-13G51-0011-R10b-SM-5LZYF 8.8
GTEX-13OW6-0011-R10a-SM-5L3HE 8.8
GTEX-13OW7-0011-R10a-SM-5L3H3 8.8
GTEX-11WQC-0011-R10a-SM-57WCT 8.7
GTEX-13FXS-0011-R10a-SM-5J2MA 8.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 8.5
GTEX-13NYS-0011-R10a-SM-5MR4S 8.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 8.5
GTEX-14BIL-0011-R10a-SM-5SI75 8.4
GTEX-X4XX-0011-R10B-SM-46MWO 8.4
GTEX-13X6K-0011-R10a-SM-5P9JR 8.3
GTEX-13FHO-0011-R10b-SM-5J2MM 8.2
GTEX-QVUS-0011-R10A-SM-3GIK3 8.2
GTEX-11ZUS-0011-R10b-SM-5BC79 8.1
GTEX-WWYW-0011-R10A-SM-3NB35 8.1
GTEX-12WSF-0011-R10a-SM-5LZVH 8.0
GTEX-13SLX-0011-R10a-SM-5P9HV 8.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 8.0
GTEX-T5JC-0011-R10A-SM-32PM2 7.9
GTEX-13N1W-0011-R10b-SM-5MR4H 7.8
GTEX-13QIC-0011-R10a-SM-5O9C7 7.8
GTEX-13NYB-0011-R10a-SM-5KM43 7.7
GTEX-S7SE-0011-R10A-SM-2XCDF 7.7
GTEX-YFC4-0011-R10a-SM-4SOK5 7.6
GTEX-13O3O-0011-R10a-SM-5LUA9 7.4
GTEX-145LS-0011-R10a-SM-5PNUQ 7.4
GTEX-145MH-0011-R10b-SM-5PNUK 7.4
GTEX-147F4-0011-R10b-SM-5S2WC 7.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 7.0
GTEX-ZV68-0011-R10a-SM-51MT7 7.0
GTEX-13O3Q-0011-R10b-SM-5KM39 6.8
GTEX-WVLH-0011-R10A-SM-3MJFM 6.8
GTEX-QDT8-0011-R10A-SM-32PKG 6.7
GTEX-X4EP-0011-R10B-SM-4QASJ 6.7
GTEX-ZVT3-0011-R10b-SM-57WB6 6.7
GTEX-131XH-0011-R10a-SM-5EGLJ 6.5
GTEX-131XW-0011-R10a-SM-5DUVA 6.5
GTEX-11H98-0011-R10b-SM-5NQ98 6.4
GTEX-131YS-0011-R10b-SM-5EQ5N 6.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 6.4
GTEX-QMR6-0011-R10A-SM-32PKO 6.4
GTEX-X261-0011-R10B-SM-4E3JT 6.3
GTEX-ZF28-0011-R10a-SM-4WWEH 6.3
GTEX-13NZA-0011-R10b-SM-5KM54 6.1
GTEX-13QJC-0011-R10a-SM-5SI63 6.1
GTEX-12WSH-0011-R10a-SM-5LZUS 6.0
GTEX-ZUA1-0011-R10a-SM-51MT6 6.0
GTEX-12WSM-0011-R10a-SM-5DUWV 5.9
GTEX-147GR-0011-R10b-SM-5S2UM 5.9
GTEX-T6MN-0011-R10A-SM-32QP7 5.9
GTEX-13S7M-0011-R10b-SM-5PNZB 5.8
GTEX-13X6I-0011-R10a-SM-5PNWI 5.8
GTEX-N7MS-0011-R10A-SM-2HMJK 5.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 5.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 5.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 5.5
GTEX-WZTO-0011-R10B-SM-4E3KB 5.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 5.5
GTEX-12WSC-0011-R10a-SM-5GU57 5.4
GTEX-TSE9-0011-R10A-SM-3DB7O 5.4
GTEX-YJ89-0011-R10a-SM-4SOK9 5.4
GTEX-14753-0011-R10b-SM-5S2WE 5.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 5.2
GTEX-Z93S-0011-R10a-SM-4RGNM 4.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC 4.8
GTEX-13IVO-0011-R10a-SM-5LZY3 4.8
GTEX-OXRN-0011-R10A-SM-2I5GC 4.8
GTEX-1313W-0011-R10b-SM-5DUXA 4.7
GTEX-145LU-0011-R10a-SM-5PNWJ 4.7
GTEX-P44H-0011-R10A-SM-2XCEK 4.6
GTEX-WL46-0011-R10A-SM-3MJFQ 4.5
GTEX-14BIN-0011-R10a-SM-5S2UA 4.4
GTEX-11WQK-0011-R10a-SM-5BC6R 4.1
GTEX-12126-0011-R10b-SM-5BC6T 4.1
GTEX-12WSE-0011-R10b-SM-5P9JV 4.0
GTEX-ZXG5-0011-R10a-SM-57WDD 4.0
GTEX-13X6J-0011-R10b-SM-5PNWA 3.9
GTEX-145MG-0011-R10a-SM-5PNWG 3.9
GTEX-NL3H-0011-R10A-SM-2I3E9 3.8
GTEX-12WSD-0011-R10b-SM-5GU79 3.1
GTEX-OXRO-0011-R10A-SM-2I5EH 3.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 2.9
GTEX-139TS-0011-R10a-SM-5K7TU 1.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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