We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ARHGEF1
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:143.0TPM
GTEx:127.3RPKM
FANTOM5:63.4Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:High
 

Antibody staining

Antibody HPA012924

 

Antibody CAB009502

 

Cells in red pulp

High   Medium  

Cells in white pulp

High   High  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

143.0

overview Female, age 60
Sample 1
TPM: 152.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 172.2
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 151.5
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 193.0
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 46.2
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

127.3

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 127.3
Samples: 104

Max RPKM: 197.6
Min RPKM: 64.1
Std RPKM: 23.2
Median RPKM: 124.9
GTEX-XGQ4-0126-SM-4AT4H 197.6
GTEX-XQ8I-1726-SM-4BOQB 194.6
GTEX-X3Y1-0126-SM-4PQZA 187.0
GTEX-QLQW-0126-SM-447BK 175.4
GTEX-146FR-1926-SM-5NQA6 167.5
GTEX-OOBJ-0926-SM-48TDO 166.5
GTEX-UPK5-1626-SM-4JBHI 166.0
GTEX-WFON-0126-SM-4LVM9 165.2
GTEX-XAJ8-0126-SM-47JYG 162.7
GTEX-Z9EW-0726-SM-5HL9H 161.0
GTEX-QV31-0126-SM-447BP 157.0
GTEX-ZVP2-0526-SM-51MSC 156.4
GTEX-X4LF-0226-SM-4QAS8 155.5
GTEX-XUJ4-0226-SM-4BOP8 155.2
GTEX-XMK1-0126-SM-4B65F 152.8
GTEX-11NSD-0426-SM-5N9CR 152.5
GTEX-Q2AH-0226-SM-48U1I 151.4
GTEX-XXEK-0126-SM-4BRVU 151.1
GTEX-11DXX-0726-SM-5H12X 147.5
GTEX-11LCK-0126-SM-5A5M5 146.0
GTEX-Y3I4-0126-SM-4TT26 146.0
GTEX-1399R-0226-SM-5IJGG 144.6
GTEX-13CF3-0226-SM-5J1NW 142.5
GTEX-OIZH-0926-SM-48TBR 140.1
GTEX-12WSJ-0526-SM-5GCOZ 137.3
GTEX-U3ZH-0126-SM-4DXUK 137.0
GTEX-WHWD-0126-SM-4OORS 136.4
GTEX-144GN-2126-SM-5O99D 135.2
GTEX-QMRM-0226-SM-4R1K7 135.0
GTEX-O5YT-0926-SM-48TDG 134.9
GTEX-1122O-0526-SM-5N9DM 134.8
GTEX-ZP4G-0326-SM-4YCEF 134.0
GTEX-ZV6S-0826-SM-5NQ6Z 133.8
GTEX-YEC4-0126-SM-4W21T 133.6
GTEX-146FQ-0626-SM-5LU9U 133.0
GTEX-13FH7-1326-SM-5IFG8 131.9
GTEX-11XUK-0426-SM-5EQML 131.4
GTEX-14DAR-0326-SM-5S2PS 131.4
GTEX-W5WG-0626-SM-4SOID 131.4
GTEX-1211K-0426-SM-5FQTP 131.2
GTEX-147F3-0126-SM-5NQBJ 130.8
GTEX-Y8LW-0126-SM-4VBS1 130.7
GTEX-12WSG-0926-SM-5EGIH 128.9
GTEX-YFCO-0926-SM-5LUA5 128.9
GTEX-11VI4-0126-SM-5GU6Z 128.7
GTEX-YB5K-1926-SM-4VDT4 128.1
GTEX-ZLFU-0526-SM-4WWBN 127.8
GTEX-12BJ1-0726-SM-5EGGF 126.5
GTEX-13X6H-0726-SM-5Q5BX 126.4
GTEX-PX3G-0926-SM-48U12 126.2
GTEX-ZPU1-1026-SM-4YCEQ 125.3
GTEX-12WSK-0126-SM-5GCO7 125.2
GTEX-U3ZN-0126-SM-4DXUM 124.5
GTEX-11P7K-0426-SM-5BC5H 124.1
GTEX-131XE-1126-SM-5EGHW 124.0
GTEX-S3XE-0626-SM-4AD6B 123.4
GTEX-T5JW-0126-SM-4DM6K 123.4
GTEX-QDVN-0526-SM-48TZ4 122.9
GTEX-13VXT-1326-SM-5LU3Y 121.6
GTEX-X585-1826-SM-4QAS3 121.5
GTEX-13PL7-1126-SM-5MR5O 121.4
GTEX-13PVR-0326-SM-5RQJY 120.6
GTEX-S4Z8-0226-SM-4AD5K 120.6
GTEX-139T6-0226-SM-5IFGZ 120.2
GTEX-13111-0126-SM-5EGHO 119.5
GTEX-QCQG-0226-SM-48U28 119.1
GTEX-QV44-0126-SM-4R1KH 118.2
GTEX-R55G-0226-SM-48FEI 118.2
GTEX-14E6E-1226-SM-5S2R5 118.1
GTEX-Y5LM-0326-SM-4VBRN 118.1
GTEX-U4B1-0526-SM-4DXTK 117.9
GTEX-ZDTT-1026-SM-5KM19 117.9
GTEX-P4QS-0926-SM-48TBS 117.1
GTEX-11P81-1326-SM-5GU5S 117.0
GTEX-ZLWG-0426-SM-4WWFA 116.3
GTEX-117YX-2126-SM-5GIEL 115.8
GTEX-PLZ6-0126-SM-48TC6 115.8
GTEX-13N11-0126-SM-5KM2Z 115.4
GTEX-ZVZP-0726-SM-59HKA 115.2
GTEX-UJHI-0126-SM-4IHLP 115.1
GTEX-POMQ-0126-SM-48TD6 112.6
GTEX-Y114-0726-SM-4TT6U 111.3
GTEX-13U4I-1626-SM-5IFFR 111.1
GTEX-ZYFG-0726-SM-5GIDX 109.9
GTEX-VJYA-0126-SM-4KL1P 106.8
GTEX-1399S-0226-SM-5IFFG 106.5
GTEX-11EQ9-0426-SM-5A5JY 105.2
GTEX-YB5E-0426-SM-5IFHR 104.7
GTEX-12WSN-0126-SM-5DUX5 104.6
GTEX-13S86-0126-SM-5S2PI 103.0
GTEX-XPVG-0626-SM-4B65B 103.0
GTEX-PW2O-0126-SM-48TC8 101.4
GTEX-Y3IK-0126-SM-4WWE9 101.2
GTEX-132QS-0226-SM-5IFFZ 101.1
GTEX-RUSQ-0126-SM-47JWV 99.9
GTEX-P4PP-0926-SM-48TBZ 99.8
GTEX-ZYWO-0226-SM-5GZX3 98.0
GTEX-ZZPU-0126-SM-5E446 97.7
GTEX-145MN-0126-SM-5RQHY 95.8
GTEX-139YR-0426-SM-5IFFV 93.3
GTEX-ZAB5-0526-SM-5CVMU 92.7
GTEX-131XG-0426-SM-5IFGD 79.3
GTEX-Q734-0226-SM-48U1A 75.9
GTEX-XV7Q-0126-SM-4BRVK 64.1
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

63.4

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 63.4
FF:10025-101D7 39,50,70 years, male 63.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.