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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:9.7RPKM
FANTOM5:42.5Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA006035

 

Antibody HPA008315

 

Glial cells

Low   Not detected  

Neuronal cells

High   Not detected  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

9.7

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 9.7
Samples: 94

Max RPKM: 33.3
Min RPKM: 1.8
Std RPKM: 5
Median RPKM: 9.3
GTEX-13OVL-0011-R1a-SM-5L3H5 33.3
GTEX-13OW5-0011-R1b-SM-5L3GE 23.6
GTEX-13N1W-0011-R1b-SM-5MR4T 21.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 18.5
GTEX-13OW6-0011-R1a-SM-5L3HQ 17.2
GTEX-11UD1-0011-R1b-SM-5BC7D 17.1
GTEX-WZTO-0011-R1B-SM-3NMAR 17.0
GTEX-13G51-0011-R1a-SM-5LZYR 17.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 16.9
GTEX-13JUV-0011-R1a-SM-5LZY4 15.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 15.7
GTEX-11ZTS-0011-R1a-SM-5BC71 15.2
GTEX-X585-0011-R1B-SM-46MVE 15.0
GTEX-13QJC-0011-R1b-SM-5S2UU 14.1
GTEX-WL46-0011-R1A-SM-3LK6M 14.0
GTEX-T6MN-0011-R1A-SM-32QOY 13.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 13.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 13.4
GTEX-13OW7-0011-R1b-SM-5L3HF 13.1
GTEX-11GSO-0011-R1b-SM-57WD3 13.0
GTEX-13O3O-0011-R1b-SM-5KM2K 12.8
GTEX-UTHO-0011-R1A-SM-3GIJO 12.7
GTEX-T5JC-0011-R1A-SM-32PM6 12.7
GTEX-13NZA-0011-R1b-SM-5LUAF 12.5
GTEX-N7MS-0011-R1a-SM-2HMJG 12.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 11.9
GTEX-13N2G-0011-R1b-SM-5MR3G 11.5
GTEX-13S7M-0011-R1b-SM-5PNZE 11.5
GTEX-QVUS-0011-R1A-SM-3GAD2 11.3
GTEX-N7MT-0011-R1a-SM-5SI7S 11.3
GTEX-145LS-0011-R1b-SM-5PNUP 10.9
GTEX-12WSB-0011-R1b-SM-5P9EY 10.9
GTEX-QMR6-0011-R1A-SM-32PKW 10.8
GTEX-13FXS-0011-R1a-SM-5K7U6 10.8
GTEX-PVOW-0011-R1A-SM-32PL6 10.5
GTEX-WWYW-0011-R1A-SM-3TW8G 10.4
GTEX-12WSD-0011-R1b-SM-5LZVY 10.4
GTEX-131XH-0011-R1a-SM-5DUWA 10.3
GTEX-12WSE-0011-R1b-SM-5GU4V 10.3
GTEX-12WSF-0011-R1a-SM-5DUVI 10.3
GTEX-RNOR-0011-R1A-SM-5SI8F 10.2
GTEX-139TT-0011-R1a-SM-5LZVD 10.1
GTEX-P44H-0011-R1A-SM-3NM8J 10.0
GTEX-S7SE-0011-R1A-SM-2XCDE 9.7
GTEX-145MH-0011-R1b-SM-5PNWY 9.7
GTEX-ZUA1-0011-R1a-SM-4YCE2 9.5
GTEX-R55E-0011-R1A-SM-2TC6N 9.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 9.2
GTEX-13JVG-0011-R1a-SM-5KM32 8.8
GTEX-12WSM-0011-R1a-SM-5LZW6 8.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 8.7
GTEX-QVJO-0011-R1A-SM-2S1QI 8.6
GTEX-TSE9-0011-R1A-SM-3DB7E 8.5
GTEX-NPJ8-0011-R1a-SM-33HCB 8.4
GTEX-XOTO-0011-R1B-SM-4B65C 8.3
GTEX-1313W-0011-R1b-SM-5EQ4A 8.2
GTEX-YFC4-0011-R1a-SM-4V6EH 8.0
GTEX-13X6I-0011-R1b-SM-5PNZC 7.9
GTEX-13NYB-0011-R1b-SM-5KM4F 7.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 7.7
GTEX-1212Z-0011-R1b-SM-5BC72 7.5
GTEX-WVLH-0011-R1A-SM-4MVOK 7.4
GTEX-12WSH-0011-R1a-SM-5GU5V 6.9
GTEX-QDT8-0011-R1A-SM-32PKS 6.9
GTEX-NPJ7-0011-R1a-SM-3GACT 6.8
GTEX-13CF2-0011-R1a-SM-5LZY1 6.8
GTEX-13112-0011-R1b-SM-5HL7K 6.7
GTEX-ZVZQ-0011-R1a-SM-57WBU 6.6
GTEX-11ONC-0011-R1a-SM-57WD4 6.6
GTEX-14ASI-0011-R1b-SM-5S2TY 6.3
GTEX-13NYS-0011-R1b-SM-5MR55 6.1
GTEX-139T8-0011-R1a-SM-5HL75 5.7
GTEX-XMD1-0011-R1A-SM-4AT4C 5.2
GTEX-131YS-0011-R1a-SM-5DUXC 5.1
GTEX-YJ89-0011-R1a-SM-4RGLS 5.0
GTEX-13FLW-0011-R1b-SM-5LZX2 5.0
GTEX-1399T-0011-R1b-SM-5DUWN 4.9
GTEX-132Q8-0011-R1a-SM-5EGLK 4.8
GTEX-X4XX-0011-R1B-SM-3P622 4.4
GTEX-13FHO-0011-R1b-SM-5KLZG 4.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 4.3
GTEX-13FHP-0011-R1b-SM-5K7XL 4.2
GTEX-145LU-0011-R1a-SM-5Q5CE 4.2
GTEX-13SLW-0011-R1a-SM-5S2W7 4.1
GTEX-13OW8-0011-R1a-SM-5L3HI 3.9
GTEX-NL3H-0011-R1a-SM-48TDJ 3.9
GTEX-PWO3-0011-R1A-SM-2I5EW 3.6
GTEX-13PDP-0011-R1a-SM-5PNX5 3.4
GTEX-144GL-0011-R1a-SM-5PNZ5 3.4
GTEX-ZF28-0011-R1a-SM-4WWD1 3.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 3.0
GTEX-144GO-0011-R1a-SM-5PNWO 2.3
GTEX-13FTY-0011-R1a-SM-5LZXE 2.1
GTEX-ZE7O-0011-R1a-SM-57WDM 1.8
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

42.5

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 42.5
FF:10374-105G5 89 years, female 49.7
FF:10153-102I9 76 years, female 41.0
FF:10169-103B7 60 years, female 36.9

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by the Knut & Alice Wallenberg foundation.