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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:46.9TPM
GTEx:68.0RPKM
FANTOM5:175.5Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Low
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA036089

 

Antibody HPA036090

 

Antibody CAB018774

 

Adipocytes

Not detected   Medium   Medium  

Glandular cells

Not detected   Low   Medium  

Myoepithelial cells

Not detected   Not detected   Medium  
     
     
     

BREAST - HPA RNA-seq

Average TPM

46.9

overview Female, age 52
Sample 1
TPM: 61.7
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 67.5
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 17.0
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 41.3
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

68.0

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 68.0
Samples: 214

Max RPKM: 192.3
Min RPKM: 10.5
Std RPKM: 30.1
Median RPKM: 65
GTEX-XMK1-1126-SM-4IHJ8 192.3
GTEX-144GM-0926-SM-5O994 169.7
GTEX-XGQ4-0926-SM-4AT4U 142.9
GTEX-YJ8O-2226-SM-5IFHW 136.1
GTEX-TKQ2-1826-SM-33HB2 134.5
GTEX-117XS-1926-SM-5GICO 134.0
GTEX-ZQUD-1926-SM-51MSA 132.2
GTEX-R53T-1526-SM-48FEK 131.2
GTEX-11DXZ-1926-SM-5GZZL 130.9
GTEX-TKQ1-0226-SM-33HB5 125.5
GTEX-144GL-2026-SM-5LU3O 125.1
GTEX-WFON-1826-SM-3GILG 122.3
GTEX-REY6-2426-SM-48FF5 122.0
GTEX-YEC3-1026-SM-5IFI5 121.3
GTEX-ZDYS-1126-SM-5K7UB 117.2
GTEX-XQ8I-2426-SM-4WAXY 114.3
GTEX-ZYT6-0126-SM-5E45J 112.3
GTEX-QMRM-1626-SM-4R1KV 111.6
GTEX-XQ3S-1326-SM-4BOPQ 111.4
GTEX-11EQ9-1826-SM-5Q5AJ 111.1
GTEX-11ZUS-0826-SM-5FQUY 110.9
GTEX-13FTW-1426-SM-5LZWZ 110.6
GTEX-11NSD-0926-SM-5N9DR 107.7
GTEX-Y3I4-1526-SM-4TT7K 107.2
GTEX-ZV6S-1826-SM-5NQ8D 106.3
GTEX-QVJO-1826-SM-447C9 105.8
GTEX-TML8-1226-SM-32QON 103.4
GTEX-145ME-1526-SM-5Q5F2 102.3
GTEX-14E6E-1326-SM-5S2NR 101.9
GTEX-145MN-1926-SM-5SIAI 101.4
GTEX-Y5V6-2126-SM-4WWFX 101.4
GTEX-11O72-2126-SM-5N9FO 101.0
GTEX-ZUA1-1526-SM-59HLS 100.7
GTEX-12WSK-2226-SM-5GCO5 99.9
GTEX-139T6-1626-SM-5PNYZ 99.6
GTEX-Y8E4-1626-SM-5S2MW 98.3
GTEX-ZT9W-2026-SM-51MRA 96.2
GTEX-13O3Q-2226-SM-5KM4O 95.5
GTEX-S32W-2026-SM-4AD6E 94.8
GTEX-132NY-0826-SM-5K7Y7 93.9
GTEX-13W46-0826-SM-5LU3H 92.3
GTEX-R55D-0826-SM-48FEA 91.9
GTEX-YB5K-1626-SM-5IFIN 91.9
GTEX-ZZ64-1226-SM-5E43R 91.9
GTEX-ZDTT-2126-SM-5S2OJ 91.8
GTEX-11ONC-2126-SM-5HL6E 91.6
GTEX-12KS4-0126-SM-5Q5A5 90.9
GTEX-12WSM-1726-SM-5BC6J 90.3
GTEX-1211K-1926-SM-5EQLB 89.9
GTEX-Y5V5-2126-SM-4WWFO 89.2
GTEX-12BJ1-1826-SM-5HL9N 89.1
GTEX-YFCO-1826-SM-4W1YH 88.0
GTEX-12WSB-0626-SM-59HJO 87.6
GTEX-ZF3C-2326-SM-5S2MZ 87.3
GTEX-ZYFC-0826-SM-5E44K 87.3
GTEX-139TU-0626-SM-5KM3X 85.6
GTEX-T6MO-0326-SM-32QOK 84.7
GTEX-13OW8-0226-SM-5K7UP 84.5
GTEX-U8XE-0826-SM-4E3J1 84.3
GTEX-11GSO-1926-SM-5A5K3 84.1
GTEX-YB5E-1726-SM-5IFJ3 83.7
GTEX-ZQG8-0726-SM-5P9H9 83.1
GTEX-XUW1-2326-SM-4BOO5 82.8
GTEX-RWS6-1926-SM-47JXY 82.0
GTEX-ZVT4-1026-SM-57WC4 81.8
GTEX-11LCK-2426-SM-5HL5F 81.1
GTEX-13N1W-0626-SM-5MR4U 79.8
GTEX-ZPIC-1126-SM-5BC7F 78.0
GTEX-W5X1-2326-SM-3GIL6 77.8
GTEX-X15G-1626-SM-3NMB3 77.8
GTEX-Y111-2026-SM-4SOJA 77.5
GTEX-WI4N-1426-SM-3LK7H 77.3
GTEX-11WQC-1726-SM-5GU4W 76.6
GTEX-WXYG-2226-SM-4E3IM 76.4
GTEX-SE5C-2126-SM-4BRUJ 76.0
GTEX-RUSQ-2026-SM-4GIAK 75.4
GTEX-13FTX-1126-SM-5N9EN 74.8
GTEX-Y8LW-1626-SM-5IFHX 74.6
GTEX-ZF29-1926-SM-5S2P1 74.4
GTEX-S33H-0326-SM-4AD6N 74.3
GTEX-XV7Q-2326-SM-4BRVZ 74.3
GTEX-11WQK-2426-SM-5GU5C 74.2
GTEX-11ZTT-2326-SM-5EQLG 74.1
GTEX-11OF3-1926-SM-59889 73.8
GTEX-Y9LG-1426-SM-5IFJZ 73.8
GTEX-12WSN-1326-SM-5GCNT 73.1
GTEX-ZZPU-0626-SM-5E43T 72.2
GTEX-S4Q7-1126-SM-4AD6R 71.6
GTEX-11DXY-2326-SM-5GICW 70.8
GTEX-11TUW-1826-SM-5BC5D 70.8
GTEX-147F4-2826-SM-5NQBN 70.0
GTEX-ZEX8-2226-SM-57WC6 68.4
GTEX-WRHU-0326-SM-3MJFY 67.8
GTEX-WYJK-1326-SM-3NB2T 67.5
GTEX-ZV7C-1826-SM-5NQ83 67.3
GTEX-11GS4-2126-SM-5A5KR 66.9
GTEX-S7SE-0826-SM-4AT4D 66.9
GTEX-WOFL-0826-SM-3MJG1 66.7
GTEX-133LE-1726-SM-5K7VQ 66.0
GTEX-XUJ4-1926-SM-4BOOV 66.0
GTEX-13W3W-1226-SM-5LU4H 65.9
GTEX-11NV4-2026-SM-5N9DG 65.8
GTEX-11P81-1926-SM-5BC53 65.7
GTEX-X4XY-0926-SM-4E3JD 65.4
GTEX-1122O-1226-SM-5H113 65.3
GTEX-11I78-2226-SM-5PNYA 65.1
GTEX-1314G-1226-SM-5BC6D 65.1
GTEX-UJHI-1426-SM-3DB9C 64.9
GTEX-13OW5-2226-SM-5L3HC 64.8
GTEX-ZLV1-1426-SM-4WWES 64.4
GTEX-X4EP-2926-SM-3P5YQ 63.4
GTEX-13O61-1826-SM-5KM4I 63.0
GTEX-Y3IK-2326-SM-4WWDT 62.8
GTEX-U3ZN-1926-SM-4DXSG 62.3
GTEX-13113-1726-SM-5GCOO 61.9
GTEX-11P7K-0726-SM-5EGKX 61.8
GTEX-UPK5-2326-SM-3P5Z8 61.8
GTEX-XBED-1626-SM-47JYN 60.2
GTEX-ZA64-1526-SM-5CVMD 60.1
GTEX-ZU9S-1926-SM-5NQBP 58.4
GTEX-WY7C-2726-SM-3NB3P 58.1
GTEX-X261-0626-SM-3NMD9 57.9
GTEX-146FH-0826-SM-5SI8T 57.7
GTEX-14753-2426-SM-5LU8U 57.0
GTEX-PSDG-1626-SM-48TCQ 56.7
GTEX-11EI6-0626-SM-5985T 56.6
GTEX-XMD2-0926-SM-4WWEF 56.3
GTEX-117YX-1426-SM-5H12H 55.9
GTEX-13D11-1026-SM-5IJFB 55.9
GTEX-13N11-1726-SM-5J1OJ 55.3
GTEX-1269C-2426-SM-5FQSN 54.9
GTEX-145MO-0826-SM-5NQBL 54.6
GTEX-ZY6K-1626-SM-5GZWV 54.3
GTEX-13NZ8-0126-SM-5IJCT 53.8
GTEX-U3ZH-1426-SM-4DXSR 52.9
GTEX-13PVQ-1026-SM-5KM3M 52.2
GTEX-1313W-0826-SM-5EQ4T 52.0
GTEX-ZWKS-2826-SM-5NQ74 51.6
GTEX-T6MN-0726-SM-32PML 51.1
GTEX-ZDXO-0126-SM-5S2ND 50.6
GTEX-11P82-1326-SM-5HL62 50.4
GTEX-S4P3-1326-SM-4AD6V 49.9
GTEX-UTHO-1026-SM-3GAF7 49.5
GTEX-S4UY-0726-SM-4AD6X 49.4
GTEX-ZAB4-2526-SM-5HL8M 49.4
GTEX-Y114-2026-SM-4TT7L 49.1
GTEX-RU72-0626-SM-46MUI 48.9
GTEX-1399U-1826-SM-5PNZ1 48.6
GTEX-132AR-0826-SM-5EGK6 48.5
GTEX-XUZC-1626-SM-4BRVP 48.5
GTEX-XMD1-0826-SM-4AT52 47.6
GTEX-WYBS-0926-SM-3NM94 47.3
GTEX-13CF2-2026-SM-5K7VI 46.7
GTEX-TMMY-0726-SM-33HBE 46.7
GTEX-1117F-2826-SM-5GZXL 46.0
GTEX-T5JW-2026-SM-4DM63 45.4
GTEX-ZVZQ-0826-SM-51MRF 45.4
GTEX-11DXW-0626-SM-5N9ER 45.2
GTEX-11EM3-1326-SM-5N9C6 45.0
GTEX-ZYWO-2326-SM-5GZY4 44.4
GTEX-VJWN-0726-SM-3GIJ8 44.3
GTEX-111YS-1926-SM-5GICC 43.8
GTEX-R55F-1726-SM-2TF4R 43.1
GTEX-S341-1526-SM-4AD6K 42.8
GTEX-ZVTK-0326-SM-51MRR 42.8
GTEX-XOT4-0726-SM-4GIAW 42.6
GTEX-XYKS-1326-SM-4BRUN 42.6
GTEX-12ZZX-1126-SM-5EGKB 42.2
GTEX-Q2AG-0326-SM-48U1O 41.9
GTEX-T2YK-2226-SM-32QPT 41.3
GTEX-13QIC-2326-SM-5LU5N 41.1
GTEX-T5JC-2126-SM-32PMO 39.9
GTEX-R3RS-0626-SM-48FE1 39.8
GTEX-ZVE2-1226-SM-5NQ8R 39.0
GTEX-QEL4-2126-SM-447AE 38.8
GTEX-ZVT2-1826-SM-5NQ8W 38.8
GTEX-ZYW4-0826-SM-5GIDG 38.8
GTEX-11DZ1-0326-SM-5N9BN 38.5
GTEX-ZTX8-1226-SM-4YCE9 38.2
GTEX-11EMC-2026-SM-5A5JV 37.8
GTEX-QDT8-0626-SM-48TYW 37.8
GTEX-Y5LM-1726-SM-4VDSX 37.8
GTEX-U412-1826-SM-4DXTJ 37.1
GTEX-T2IS-1526-SM-32QPR 37.0
GTEX-1192X-2326-SM-5987X 36.7
GTEX-ZXES-0826-SM-5E43C 36.7
GTEX-13NZB-2126-SM-5MR4Y 35.9
GTEX-13CF3-2126-SM-5IFJP 35.8
GTEX-13FHO-0826-SM-5L3E8 34.8
GTEX-WYVS-1726-SM-3NMAY 34.7
GTEX-11PRG-0826-SM-5EQ6A 34.6
GTEX-11TT1-2126-SM-5GU5Y 34.1
GTEX-13PL6-2926-SM-5L3I2 34.1
GTEX-131YS-0626-SM-5EGKL 33.9
GTEX-VUSG-2226-SM-4KKZO 33.9
GTEX-13S86-1226-SM-5S2OA 33.3
GTEX-ZF2S-2026-SM-5E461 32.5
GTEX-ZC5H-2626-SM-5J2MG 32.0
GTEX-SIU7-1626-SM-4BRUK 31.6
GTEX-13O3O-0826-SM-5K7WE 31.0
GTEX-132Q8-1426-SM-5EGK7 30.6
GTEX-YFC4-1426-SM-5IFJG 29.8
GTEX-ZLFU-2126-SM-4WWEV 28.9
GTEX-13NZ9-1026-SM-5MR5K 28.4
GTEX-ZAJG-0626-SM-5HL8X 27.7
GTEX-QEG5-0726-SM-4R1JQ 27.0
GTEX-145LT-0726-SM-5S2VM 26.7
GTEX-14AS3-1626-SM-5S2OY 26.2
GTEX-13FTY-2226-SM-5J1ND 25.3
GTEX-ZTTD-1026-SM-51MRD 24.8
GTEX-131XW-0726-SM-5EGK3 23.0
GTEX-13O3P-0826-SM-5L3DH 22.2
GTEX-139T8-0826-SM-5L3DE 21.7
GTEX-14ABY-2126-SM-5QGQZ 10.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

175.5

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 175.5
FF:10080-102A8 77 years, female 175.5

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