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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:32.1TPM
GTEx:9.8RPKM
FANTOM5:9.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not available
 

Antibody staining

Antibody HPA026549

  

Antibody HPA028520

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Low  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not available
 

Antibody staining

Antibody HPA026549

  

Antibody HPA028520

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

32.1
N/A Female, age 80
Sample 1
TPM: 40.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 48.0
N/A Female, age 57
Sample 3
TPM: 36.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 16.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 19.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

9.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 10.2
Samples: 350

Max RPKM: 26.8
Min RPKM: 4
Std RPKM: 3.6
Median RPKM: 9.3
GTEX-ZC5H-0126-SM-4WAYL 26.8
GTEX-SNMC-1326-SM-2XCFK 21.8
GTEX-U3ZN-2626-SM-3DB7T 21.1
GTEX-P4PP-0226-SM-5S2VR 20.8
GTEX-T6MO-1726-SM-33HB8 20.5
GTEX-ZTPG-0226-SM-5O99I 20.2
GTEX-Z93T-0226-SM-5HL5Z 20.1
GTEX-O5YT-0226-SM-32PK5 19.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 9.3
Samples: 227

Max RPKM: 29.3
Min RPKM: 1.7
Std RPKM: 3.8
Median RPKM: 8.6
GTEX-VUSG-1426-SM-3GIJN 29.3
GTEX-ZP4G-1326-SM-5EGIW 22.2
GTEX-ZF2S-1526-SM-5S2OO 22.0
GTEX-W5X1-1426-SM-3GIKH 21.0
GTEX-139YR-0326-SM-5J1MC 20.4
GTEX-131XG-0126-SM-5K7UJ 18.5
GTEX-XAJ8-0226-SM-4GIB2 17.8
GTEX-XMK1-0926-SM-4B66X 17.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

9.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 9.6
FF:10010-101C1 65,65,76 years, mixed 9.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.