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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:52.6TPM
GTEx:21.5RPKM
FANTOM5:21.3Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Medium
 

Antibody staining

Antibody HPA026549

 

Antibody HPA028520

 

Bile duct cells

Not detected   Not detected  

Hepatocytes

Medium   Medium  
   
   
   

LIVER - HPA RNA-seq

Average TPM

52.6

N/A Female, age 60
Sample 1
TPM: 48.3
overview Male, age 54
Sample 2
TPM: 30.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 40.1
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 80.0
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 52.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 54.9
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 49.2
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 42.6
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 57.4
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 70.1
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

21.5

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 21.5
Samples: 119

Max RPKM: 42.9
Min RPKM: 6.5
Std RPKM: 6.7
Median RPKM: 21.7
GTEX-R53T-0326-SM-48FEC 42.9
GTEX-14AS3-0126-SM-5Q5F4 39.7
GTEX-13FTZ-0726-SM-5IFFY 36.9
GTEX-QEG4-1826-SM-4R1JN 34.5
GTEX-11OF3-0726-SM-5BC4Z 34.0
GTEX-13VXU-0926-SM-5IFFH 33.9
GTEX-1399T-0826-SM-5IFES 32.6
GTEX-13NZ9-1326-SM-5MR3V 31.2
GTEX-YB5E-0326-SM-5IFHU 30.7
GTEX-UPK5-1426-SM-4JBHH 30.5
GTEX-Y5LM-0426-SM-4VBRO 30.1
GTEX-T6MN-1226-SM-3NMA5 29.4
GTEX-139TS-1426-SM-5IFJD 29.2
GTEX-13SLX-1226-SM-5S2Q6 29.1
GTEX-ZAB5-0426-SM-5CVMI 29.1
GTEX-ZVT3-1626-SM-5GU66 29.0
GTEX-12WSI-0226-SM-5GCNA 28.3
GTEX-ZYT6-0626-SM-5E45V 28.3
GTEX-QESD-2026-SM-447BI 27.2
GTEX-RNOR-1426-SM-48FDJ 27.2
GTEX-13NYB-1026-SM-5IFH3 27.1
GTEX-OOBJ-0826-SM-3NB2K 27.0
GTEX-Q2AG-1126-SM-48U1P 26.8
GTEX-UTHO-2426-SM-4JBHD 26.7
GTEX-131YS-1626-SM-5HL6C 26.6
GTEX-11NV4-1326-SM-5HL6V 26.1
GTEX-12WSM-0726-SM-5GCOW 26.1
GTEX-147JS-1126-SM-5RQIW 26.0
GTEX-11WQC-0726-SM-5EQMR 25.9
GTEX-Y5V5-0926-SM-4VBPZ 25.5
GTEX-WZTO-0626-SM-4PQYY 25.4
GTEX-14A5I-1726-SM-5QGQ5 25.3
GTEX-RU72-1426-SM-46MUF 25.2
GTEX-U3ZN-0226-SM-3DB8D 25.1
GTEX-11EQ9-0526-SM-5A5JZ 25.0
GTEX-S33H-1626-SM-4AD68 25.0
GTEX-11DXZ-0126-SM-5EGGY 24.8
GTEX-RTLS-1326-SM-46MUN 24.4
GTEX-WFON-1726-SM-4LVMQ 24.4
GTEX-ZPU1-0826-SM-57WG2 24.2
GTEX-131XH-0626-SM-5LZWH 24.1
GTEX-11DXY-0526-SM-5EGGQ 24.0
GTEX-13112-1426-SM-5EGH8 24.0
GTEX-145MF-0826-SM-5QGQA 23.9
GTEX-1497J-0726-SM-5Q5D1 23.7
GTEX-13FTW-1126-SM-5J2NV 23.3
GTEX-13NZB-0626-SM-5IFH6 23.3
GTEX-13OW6-2626-SM-5IFF2 23.2
GTEX-P78B-1326-SM-3P611 22.9
GTEX-13QJC-0726-SM-5RQJK 22.7
GTEX-14DAQ-1726-SM-5S2R2 22.6
GTEX-RN64-1826-SM-48FDV 22.6
GTEX-SJXC-1226-SM-4DM78 22.6
GTEX-13N2G-0926-SM-5IFGJ 22.5
GTEX-S4Z8-0526-SM-4AD4T 22.3
GTEX-13N11-0926-SM-5IJG2 22.1
GTEX-14E1K-0326-SM-5S2PE 22.1
GTEX-QV44-0326-SM-4R1KD 22.1
GTEX-11ZVC-0726-SM-5FQT9 22.0
GTEX-11ZUS-2526-SM-59872 21.7
GTEX-145LU-1326-SM-5LU9N 21.5
GTEX-ZF2S-3026-SM-4WWCH 21.4
GTEX-12KS4-1326-SM-5LUB3 21.3
GTEX-11NUK-1226-SM-5P9GM 21.0
GTEX-11ZTS-1426-SM-5EQMM 21.0
GTEX-X261-1726-SM-4PQYT 20.9
GTEX-14753-1626-SM-5NQ9L 20.7
GTEX-X4EP-1026-SM-4QAS5 20.6
GTEX-139TU-0826-SM-5IJFG 20.5
GTEX-1399R-1226-SM-5P9GF 20.2
GTEX-ZZPU-0426-SM-5GZYH 20.2
GTEX-XBEC-1526-SM-4AT68 20.1
GTEX-Z9EW-0426-SM-5CVM9 20.0
GTEX-ZVP2-0626-SM-51MSO 20.0
GTEX-1212Z-0226-SM-59HLF 19.5
GTEX-PX3G-0826-SM-48TZS 19.4
GTEX-X4EO-1126-SM-4QARQ 19.4
GTEX-12WSD-1426-SM-5GCN9 19.3
GTEX-YECK-1926-SM-4W21H 19.3
GTEX-UPIC-0926-SM-4IHLV 19.0
GTEX-1269C-0626-SM-5FQSS 18.9
GTEX-YFC4-1526-SM-5IFJS 18.8
GTEX-147F4-1426-SM-5LUA8 18.7
GTEX-146FH-1526-SM-5NQBU 18.1
GTEX-Q734-0326-SM-48U15 17.5
GTEX-12WSG-0626-SM-5FQTQ 16.9
GTEX-13FLV-0326-SM-5N9DJ 16.9
GTEX-TKQ2-1726-SM-4DXUP 16.7
GTEX-REY6-1226-SM-48FDR 16.6
GTEX-VUSG-0126-SM-4KL1X 16.5
GTEX-ZAB4-0826-SM-5LU9D 16.1
GTEX-ZF29-2026-SM-4WWB7 16.1
GTEX-11GSP-0626-SM-5986T 15.8
GTEX-XOTO-0826-SM-4B65O 15.7
GTEX-RM2N-1926-SM-48FCU 15.6
GTEX-X3Y1-2726-SM-4PQZH 15.6
GTEX-139YR-0226-SM-5IFEM 15.5
GTEX-13PVR-0126-SM-5S2PY 15.5
GTEX-12WSL-0226-SM-5CVMJ 15.2
GTEX-13113-1326-SM-5GCOI 14.8
GTEX-WQUQ-1926-SM-4OOSA 14.8
GTEX-WYVS-1926-SM-4PQZ2 14.7
GTEX-145MO-2326-SM-5NQ9K 13.3
GTEX-QEL4-1226-SM-447A4 12.8
GTEX-ZYY3-0626-SM-5NQ6W 12.5
GTEX-12ZZZ-1326-SM-59HKW 12.4
GTEX-RWSA-1426-SM-47JXA 12.3
GTEX-12696-0826-SM-5EGGE 12.1
GTEX-ZVT4-0626-SM-5E45T 12.0
GTEX-132NY-0926-SM-5P9G3 11.3
GTEX-YEC4-0826-SM-5P9FV 11.1
GTEX-131XE-0326-SM-5LZVO 10.9
GTEX-S32W-1926-SM-4AD63 10.7
GTEX-13O3O-1826-SM-5IFGW 10.6
GTEX-X4XY-1626-SM-46MVN 9.7
GTEX-144GM-1326-SM-5LU5E 9.5
GTEX-QDVN-0826-SM-48TZ2 9.2
GTEX-ZTPG-1426-SM-51MT3 9.2
GTEX-14C38-1526-SM-5RQJ7 6.5
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

21.3

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 21.3
FF:10018-101C9 64,69,70 years, mixed 21.3

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