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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA ENDOMETRIUM

GENE/PROTEIN

Antibody validation


Dictionary

Endometrium

Tissue proteome

Endometrium

ENDOMETRIUM - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:171.3TPM
GTEx:34.5RPKM
FANTOM5:436.9Tags Per Million

ENDOMETRIUM 1 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Medium
Glandular cells:High
 

Antibody staining

Antibody HPA004751

 

Antibody HPA008428

 

Antibody HPA017176

 

Antibody CAB000068

 

Antibody CAB055100

 

Cells in endometrial stroma

Low   Medium   Not detected   Medium   Medium  

Glandular cells

High   High   Medium   Medium   High  
         
         
         

ENDOMETRIUM 2 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:High
Glandular cells:High
 

Antibody staining

Antibody HPA004751

 

Antibody HPA008428

 

Antibody HPA017176

 

Antibody CAB000068

 

Antibody CAB055100

 

Cells in endometrial stroma

Low   High   Not detected   High   High  

Glandular cells

High   High   Low   High   High  
         
         
         

ENDOMETRIUM - HPA RNA-seq

Average TPM

171.3

overview Female, age 34
Sample 1
TPM: 86.6
Cell types%
Glandular cells: 5
Stromal cells: 25
Smooth muscle cells: 65
Other cell types: 5
overview Female, age 56
Sample 2
TPM: 52.1
Cell types%
Glandular cells: 5
Stromal cells: 15
Smooth muscle cells: 75
Other cell types: 5
overview Female, age 40
Sample 3
TPM: 379.9
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 70
Other cell types: 5
overview Female, age 60
Sample 4
TPM: 125.7
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 75
Other cell types: 0
overview Female, age 83
Sample 5
TPM: 212.2
Cell types%
Glandular cells: 5
Stromal cells: 10
Smooth muscle cells: 80
Other cell types: 5

ENDOMETRIUM - GTEx RNA-seq

Average RPKM

34.5

GTEx sample id

RPKM

 

Uterus - Endometrium

Uterus - Endometrium
RPKM: 34.5
Samples: 14

Max RPKM: 67.9
Min RPKM: 6.8
Std RPKM: 17.7
Median RPKM: 35.5
GTEX-P78B-2526-SM-3P5ZY 67.9
GTEX-S32W-1426-SM-4AD66 54.3
GTEX-U3ZN-0726-SM-4DXT5 50.5
GTEX-ZTPG-2026-SM-5O999 50.5
GTEX-ZVT2-0426-SM-5E44S 41.4
GTEX-R55G-1626-SM-48FF4 39.3
GTEX-PX3G-2026-SM-48U1H 36.1
GTEX-Y114-1826-SM-4TT87 34.9
GTEX-13QBU-1626-SM-5LU4S 34.8
GTEX-T5JW-1526-SM-4DM5E 28.1
GTEX-11EM3-1926-SM-5987U 17.3
GTEX-T6MO-1526-SM-4DM57 13.6
GTEX-PWN1-2026-SM-48TD9 6.9
GTEX-XUZC-0926-SM-4BOQF 6.8
Show all

ENDOMETRIUM - FANTOM5 CAGE

Average Tags Per Million

436.9

FANTOM5 sample id

Sample description

Tags Per Million

Uterus
Tags Per Million: 436.9
FF:10100-102D1 23-63 years, female 436.9

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