Fields »
ABOUT
HELP
BLOG
ME2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.9TPM
GTEx:8.9RPKM
FANTOM5:42.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA008247

  

Antibody HPA008880

  

Adipocytes

 Low   Medium  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Low   Low  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA008247

  

Antibody HPA008880

  

Adipocytes

 Low   Low  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Low   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

19.9
N/A Female, age 80
Sample 1
TPM: 13.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 14.3
N/A Female, age 57
Sample 3
TPM: 12.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 38.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 20.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

8.9

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 8.9
Samples: 350

Max RPKM: 26
Min RPKM: 5.2
Std RPKM: 2.4
Median RPKM: 8.4
GTEX-QDT8-0226-SM-32PL4 26.0
GTEX-POMQ-2326-SM-5S2VS 21.9
GTEX-13JVG-0226-SM-5J1MW 20.7
GTEX-111VG-2326-SM-5N9BK 19.4
GTEX-O5YT-0226-SM-32PK5 18.8
GTEX-11EQ8-0226-SM-5EQ5G 16.9
GTEX-OOBK-0226-SM-2YUMF 16.9
GTEX-Q734-1826-SM-2I3EL 16.4
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 9.0
Samples: 227

Max RPKM: 22.8
Min RPKM: 5.1
Std RPKM: 2.4
Median RPKM: 8.4
GTEX-ZZPU-0326-SM-5N9BJ 22.8
GTEX-UPK5-1826-SM-3GAEB 17.7
GTEX-13N11-1826-SM-5IJDS 16.5
GTEX-1128S-0926-SM-5GZZU 16.4
GTEX-117YW-0826-SM-5H11O 16.1
GTEX-117YX-0726-SM-5GIET 15.2
GTEX-ZYVF-1026-SM-5E44V 15.1
GTEX-W5X1-1426-SM-3GIKH 14.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

42.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 42.8
FF:10010-101C1 65,65,76 years, mixed 42.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.