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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:46.1TPM
GTEx:20.1RPKM
FANTOM5:198.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA008247

 

Antibody HPA008880

 

Glandular cells

High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

46.1

overview Male, age 65
Sample 1
TPM: 34.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 43.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 43.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 63.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

20.1

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 20.1
Samples: 88

Max RPKM: 41.7
Min RPKM: 7.5
Std RPKM: 7.3
Median RPKM: 18.4
GTEX-XGQ4-1326-SM-4GIDU 41.7
GTEX-ZYFG-2026-SM-5E43Y 40.5
GTEX-YB5E-1526-SM-5IFIE 37.7
GTEX-13113-1226-SM-5EGHT 34.9
GTEX-13FTW-2026-SM-5IJE2 33.3
GTEX-14DAR-1426-SM-5RQIR 33.1
GTEX-ZLV1-1126-SM-4WWBW 32.8
GTEX-XXEK-1026-SM-4BRUW 31.2
GTEX-XUZC-1426-SM-4BRV3 31.1
GTEX-145LT-1026-SM-5LU9O 29.2
GTEX-13PL7-2626-SM-5IFH4 28.2
GTEX-131XF-1326-SM-5GCMQ 27.7
GTEX-ZTX8-0526-SM-59HLD 26.9
GTEX-11P7K-1626-SM-5GU63 26.8
GTEX-ZVZP-1826-SM-5GZXB 26.8
GTEX-Y9LG-1626-SM-5IFHM 26.7
GTEX-139YR-2226-SM-5IFFW 26.5
GTEX-ZTSS-0926-SM-59865 26.0
GTEX-ZPCL-1726-SM-57WEO 25.6
GTEX-13D11-0726-SM-5LZZB 25.3
GTEX-ZZ64-0526-SM-5GZXM 25.1
GTEX-1122O-1326-SM-5H11F 24.7
GTEX-YEC4-1726-SM-4W21E 24.6
GTEX-XBED-1426-SM-4AT4G 24.6
GTEX-ZYWO-1526-SM-5SIAL 24.2
GTEX-11EQ9-1326-SM-5985X 24.0
GTEX-WFJO-0926-SM-4LVM2 23.6
GTEX-13O61-1326-SM-5KM31 23.2
GTEX-ZXES-1526-SM-5NQ95 22.5
GTEX-11P82-0826-SM-5P9GU 22.5
GTEX-11I78-1126-SM-5A5K5 22.4
GTEX-11DXX-1626-SM-5H11H 22.4
GTEX-14E6E-1626-SM-5RQI7 22.3
GTEX-ZA64-1226-SM-5HL7B 22.2
GTEX-VJYA-0926-SM-4KL1N 22.2
GTEX-ZVT2-2126-SM-5NQ93 21.5
GTEX-ZVP2-1726-SM-5GU5P 20.8
GTEX-139T6-1026-SM-5IJGC 20.7
GTEX-11DXZ-1326-SM-5H11X 20.2
GTEX-YF7O-1826-SM-5IFIU 20.1
GTEX-ZPIC-2326-SM-57WDW 19.9
GTEX-13CF3-1226-SM-5LZXN 19.3
GTEX-133LE-1426-SM-5IFH1 19.0
GTEX-1399U-2126-SM-5IFEZ 18.5
GTEX-UPK5-2026-SM-4JBIM 18.4
GTEX-WFG7-1726-SM-4LVME 18.4
GTEX-ZLFU-1526-SM-4WWBT 18.1
GTEX-1399R-2026-SM-5K7WN 17.9
GTEX-11NSD-1726-SM-5N9C3 17.9
GTEX-ZEX8-1826-SM-57WBH 17.8
GTEX-WQUQ-2426-SM-4MVNW 17.8
GTEX-X5EB-1626-SM-4E3IV 17.7
GTEX-1399S-2026-SM-5KM4B 17.4
GTEX-ZTPG-2626-SM-57WFX 17.4
GTEX-XAJ8-0526-SM-47JYK 17.1
GTEX-13FH7-1226-SM-5IJFK 16.6
GTEX-Z9EW-0926-SM-5CVMM 16.6
GTEX-Y3IK-1726-SM-4YCCR 16.5
GTEX-11VI4-1626-SM-5EQKO 16.3
GTEX-11XUK-1426-SM-5EQMG 15.9
GTEX-145ME-0926-SM-5O9AR 15.7
GTEX-WFG8-1626-SM-4LVMB 15.1
GTEX-131XG-1726-SM-5LZUR 15.0
GTEX-ZF2S-1726-SM-57WFT 14.9
GTEX-ZP4G-1626-SM-57WGD 14.8
GTEX-13RTK-0826-SM-5Q5C6 14.8
GTEX-12BJ1-1926-SM-5HL9Z 14.8
GTEX-WH7G-1626-SM-4LVMY 14.7
GTEX-Y5LM-1626-SM-4VDTB 14.6
GTEX-Y114-1426-SM-4TT6W 13.8
GTEX-X15G-1426-SM-4PQZK 13.7
GTEX-ZQUD-0926-SM-57WE3 13.4
GTEX-12WSK-1526-SM-5CVNO 13.2
GTEX-ZQG8-2526-SM-57WEQ 13.2
GTEX-13O21-1026-SM-5IJDU 12.8
GTEX-ZC5H-2326-SM-4WAYT 12.2
GTEX-WRHK-1026-SM-4MVOD 11.7
GTEX-111CU-1326-SM-5NQ8L 11.7
GTEX-13111-1426-SM-5DUW3 11.4
GTEX-117YX-0326-SM-5GICL 11.2
GTEX-WEY5-1526-SM-4LMJF 11.0
GTEX-VUSG-1726-SM-4KKZL 11.0
GTEX-111YS-1426-SM-5GID8 11.0
GTEX-XMK1-1826-SM-4B66F 10.5
GTEX-148VJ-2226-SM-5NQ9M 10.4
GTEX-13QBU-1926-SM-5IJEW 9.5
GTEX-1192X-2526-SM-59868 9.0
GTEX-13OVI-1926-SM-5IJCG 7.5
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

198.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 198.3
FF:10024-101D6 15,40,85 years, mixed 198.3

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