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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:340.0TPM
GTEx:85.1RPKM
FANTOM5:3660.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA049793

 

Antibody CAB016070

 

Glandular cells

Not detected   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

340.0

overview Male, age 65
Sample 1
TPM: 355.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 389.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 235.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 379.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

85.1

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 85.1
Samples: 88

Max RPKM: 376.6
Min RPKM: 0
Std RPKM: 87.3
Median RPKM: 61.5
GTEX-ZPCL-1726-SM-57WEO 376.6
GTEX-Y9LG-1626-SM-5IFHM 324.2
GTEX-111YS-1426-SM-5GID8 297.7
GTEX-13D11-0726-SM-5LZZB 297.4
GTEX-1399S-2026-SM-5KM4B 283.4
GTEX-ZTSS-0926-SM-59865 262.1
GTEX-14DAR-1426-SM-5RQIR 230.8
GTEX-ZVZP-1826-SM-5GZXB 218.8
GTEX-ZXES-1526-SM-5NQ95 205.2
GTEX-ZZ64-0526-SM-5GZXM 198.7
GTEX-ZLV1-1126-SM-4WWBW 193.6
GTEX-145LT-1026-SM-5LU9O 190.1
GTEX-11I78-1126-SM-5A5K5 188.9
GTEX-1122O-1326-SM-5H11F 179.8
GTEX-XXEK-1026-SM-4BRUW 175.9
GTEX-YB5E-1526-SM-5IFIE 165.3
GTEX-YF7O-1826-SM-5IFIU 165.0
GTEX-11DXX-1626-SM-5H11H 164.2
GTEX-11P7K-1626-SM-5GU63 163.4
GTEX-11EQ9-1326-SM-5985X 160.2
GTEX-YEC4-1726-SM-4W21E 144.7
GTEX-14E6E-1626-SM-5RQI7 144.4
GTEX-13PL7-2626-SM-5IFH4 137.0
GTEX-ZTX8-0526-SM-59HLD 120.0
GTEX-XBED-1426-SM-4AT4G 110.8
GTEX-13FTW-2026-SM-5IJE2 104.1
GTEX-11DXZ-1326-SM-5H11X 101.1
GTEX-XUZC-1426-SM-4BRV3 97.1
GTEX-139T6-1026-SM-5IJGC 92.3
GTEX-ZPIC-2326-SM-57WDW 90.1
GTEX-13113-1226-SM-5EGHT 89.6
GTEX-ZYFG-2026-SM-5E43Y 83.8
GTEX-ZLFU-1526-SM-4WWBT 83.5
GTEX-ZTPG-2626-SM-57WFX 80.3
GTEX-11P82-0826-SM-5P9GU 76.8
GTEX-131XF-1326-SM-5GCMQ 75.0
GTEX-13CF3-1226-SM-5LZXN 75.0
GTEX-11XUK-1426-SM-5EQMG 74.8
GTEX-13FH7-1226-SM-5IJFK 67.4
GTEX-ZYWO-1526-SM-5SIAL 65.2
GTEX-XGQ4-1326-SM-4GIDU 64.6
GTEX-ZVP2-1726-SM-5GU5P 64.5
GTEX-X5EB-1626-SM-4E3IV 64.1
GTEX-Y114-1426-SM-4TT6W 63.2
GTEX-WFG7-1726-SM-4LVME 59.8
GTEX-133LE-1426-SM-5IFH1 59.7
GTEX-ZEX8-1826-SM-57WBH 55.9
GTEX-WFJO-0926-SM-4LVM2 54.9
GTEX-XAJ8-0526-SM-47JYK 52.2
GTEX-13O61-1326-SM-5KM31 49.4
GTEX-ZVT2-2126-SM-5NQ93 47.0
GTEX-12BJ1-1926-SM-5HL9Z 45.4
GTEX-VJYA-0926-SM-4KL1N 42.3
GTEX-139YR-2226-SM-5IFFW 40.5
GTEX-ZA64-1226-SM-5HL7B 40.5
GTEX-13O21-1026-SM-5IJDU 39.0
GTEX-WH7G-1626-SM-4LVMY 33.0
GTEX-1399R-2026-SM-5K7WN 31.8
GTEX-11NSD-1726-SM-5N9C3 30.8
GTEX-1399U-2126-SM-5IFEZ 26.2
GTEX-ZQUD-0926-SM-57WE3 23.3
GTEX-Z9EW-0926-SM-5CVMM 18.6
GTEX-13RTK-0826-SM-5Q5C6 18.0
GTEX-WQUQ-2426-SM-4MVNW 16.7
GTEX-111CU-1326-SM-5NQ8L 14.4
GTEX-11VI4-1626-SM-5EQKO 14.2
GTEX-ZF2S-1726-SM-57WFT 13.5
GTEX-12WSK-1526-SM-5CVNO 10.2
GTEX-145ME-0926-SM-5O9AR 9.5
GTEX-13OVI-1926-SM-5IJCG 7.4
GTEX-Y3IK-1726-SM-4YCCR 7.2
GTEX-WRHK-1026-SM-4MVOD 4.9
GTEX-117YX-0326-SM-5GICL 3.5
GTEX-X15G-1426-SM-4PQZK 3.3
GTEX-13QBU-1926-SM-5IJEW 1.0
GTEX-131XG-1726-SM-5LZUR 0.9
GTEX-ZP4G-1626-SM-57WGD 0.7
GTEX-XMK1-1826-SM-4B66F 0.7
GTEX-WFG8-1626-SM-4LVMB 0.6
GTEX-WEY5-1526-SM-4LMJF 0.5
GTEX-VUSG-1726-SM-4KKZL 0.4
GTEX-ZQG8-2526-SM-57WEQ 0.2
GTEX-Y5LM-1626-SM-4VDTB 0.1
GTEX-13111-1426-SM-5DUW3 0.1
GTEX-1192X-2526-SM-59868 0.1
GTEX-ZC5H-2326-SM-4WAYT 0.0
GTEX-148VJ-2226-SM-5NQ9M 0.0
GTEX-UPK5-2026-SM-4JBIM 0.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

3660.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 3660.9
FF:10024-101D6 15,40,85 years, mixed 3660.9

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