We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
NCOA1
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:21.2TPM
GTEx:9.2RPKM
FANTOM5:4.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody CAB019402

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

21.2

overview Male, age 65
Sample 1
TPM: 24.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 18.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 21.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 21.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

9.2

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 9.2
Samples: 88

Max RPKM: 12.6
Min RPKM: 6
Std RPKM: 1.3
Median RPKM: 9.1
GTEX-111CU-1326-SM-5NQ8L 12.6
GTEX-ZQUD-0926-SM-57WE3 12.6
GTEX-148VJ-2226-SM-5NQ9M 12.0
GTEX-145ME-0926-SM-5O9AR 11.8
GTEX-1192X-2526-SM-59868 11.7
GTEX-13O21-1026-SM-5IJDU 11.7
GTEX-117YX-0326-SM-5GICL 11.5
GTEX-Y114-1426-SM-4TT6W 11.4
GTEX-ZLFU-1526-SM-4WWBT 10.9
GTEX-ZF2S-1726-SM-57WFT 10.8
GTEX-ZP4G-1626-SM-57WGD 10.8
GTEX-131XG-1726-SM-5LZUR 10.7
GTEX-YB5E-1526-SM-5IFIE 10.5
GTEX-WEY5-1526-SM-4LMJF 10.4
GTEX-VJYA-0926-SM-4KL1N 10.4
GTEX-12WSK-1526-SM-5CVNO 10.4
GTEX-13O61-1326-SM-5KM31 10.4
GTEX-11P7K-1626-SM-5GU63 10.3
GTEX-ZZ64-0526-SM-5GZXM 10.2
GTEX-ZXES-1526-SM-5NQ95 10.1
GTEX-ZVP2-1726-SM-5GU5P 10.1
GTEX-11VI4-1626-SM-5EQKO 10.1
GTEX-13RTK-0826-SM-5Q5C6 10.1
GTEX-ZTPG-2626-SM-57WFX 10.0
GTEX-13111-1426-SM-5DUW3 10.0
GTEX-13FTW-2026-SM-5IJE2 10.0
GTEX-ZC5H-2326-SM-4WAYT 9.9
GTEX-XMK1-1826-SM-4B66F 9.8
GTEX-VUSG-1726-SM-4KKZL 9.8
GTEX-131XF-1326-SM-5GCMQ 9.7
GTEX-ZTX8-0526-SM-59HLD 9.6
GTEX-145LT-1026-SM-5LU9O 9.6
GTEX-139T6-1026-SM-5IJGC 9.5
GTEX-ZEX8-1826-SM-57WBH 9.5
GTEX-11DXZ-1326-SM-5H11X 9.5
GTEX-11XUK-1426-SM-5EQMG 9.5
GTEX-139YR-2226-SM-5IFFW 9.4
GTEX-13113-1226-SM-5EGHT 9.4
GTEX-ZVT2-2126-SM-5NQ93 9.3
GTEX-XXEK-1026-SM-4BRUW 9.3
GTEX-11NSD-1726-SM-5N9C3 9.3
GTEX-1399U-2126-SM-5IFEZ 9.3
GTEX-ZQG8-2526-SM-57WEQ 9.3
GTEX-1399S-2026-SM-5KM4B 9.2
GTEX-13OVI-1926-SM-5IJCG 9.1
GTEX-13QBU-1926-SM-5IJEW 9.0
GTEX-XGQ4-1326-SM-4GIDU 9.0
GTEX-ZLV1-1126-SM-4WWBW 8.9
GTEX-XBED-1426-SM-4AT4G 8.9
GTEX-11EQ9-1326-SM-5985X 8.9
GTEX-ZPIC-2326-SM-57WDW 8.8
GTEX-XAJ8-0526-SM-47JYK 8.8
GTEX-11P82-0826-SM-5P9GU 8.7
GTEX-1399R-2026-SM-5K7WN 8.7
GTEX-UPK5-2026-SM-4JBIM 8.7
GTEX-13FH7-1226-SM-5IJFK 8.6
GTEX-ZPCL-1726-SM-57WEO 8.6
GTEX-X15G-1426-SM-4PQZK 8.6
GTEX-WRHK-1026-SM-4MVOD 8.6
GTEX-WFG7-1726-SM-4LVME 8.6
GTEX-WFG8-1626-SM-4LVMB 8.6
GTEX-Y9LG-1626-SM-5IFHM 8.5
GTEX-Z9EW-0926-SM-5CVMM 8.4
GTEX-11I78-1126-SM-5A5K5 8.4
GTEX-Y3IK-1726-SM-4YCCR 8.4
GTEX-ZTSS-0926-SM-59865 8.3
GTEX-14DAR-1426-SM-5RQIR 8.3
GTEX-ZYWO-1526-SM-5SIAL 8.2
GTEX-13PL7-2626-SM-5IFH4 8.2
GTEX-WFJO-0926-SM-4LVM2 8.0
GTEX-12BJ1-1926-SM-5HL9Z 8.0
GTEX-11DXX-1626-SM-5H11H 8.0
GTEX-1122O-1326-SM-5H11F 7.9
GTEX-ZVZP-1826-SM-5GZXB 7.9
GTEX-XUZC-1426-SM-4BRV3 7.8
GTEX-13CF3-1226-SM-5LZXN 7.8
GTEX-Y5LM-1626-SM-4VDTB 7.6
GTEX-13D11-0726-SM-5LZZB 7.6
GTEX-ZYFG-2026-SM-5E43Y 7.4
GTEX-YEC4-1726-SM-4W21E 7.4
GTEX-WH7G-1626-SM-4LVMY 7.3
GTEX-14E6E-1626-SM-5RQI7 7.3
GTEX-YF7O-1826-SM-5IFIU 7.0
GTEX-X5EB-1626-SM-4E3IV 7.0
GTEX-133LE-1426-SM-5IFH1 6.9
GTEX-111YS-1426-SM-5GID8 6.7
GTEX-WQUQ-2426-SM-4MVNW 6.6
GTEX-ZA64-1226-SM-5HL7B 6.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

4.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 4.0
FF:10024-101D6 15,40,85 years, mixed 4.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.