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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

RNA expression

GTEx:5.1RPKM
FANTOM5:28.1Tags Per Million

HIPPOCAMPUS - Annotated protein expression

 

Antibody staining

Antibody HPA039964

 

Glial cells

Not detected  

Neuronal cells

Medium  
 
 
 

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

5.1

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 5.1
Samples: 94

Max RPKM: 14.6
Min RPKM: 1.3
Std RPKM: 2.6
Median RPKM: 4.7
GTEX-13O3O-0011-R1b-SM-5KM2K 14.6
GTEX-13JUV-0011-R1a-SM-5LZY4 11.3
GTEX-N7MS-0011-R1a-SM-2HMJG 10.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 10.4
GTEX-144GL-0011-R1a-SM-5PNZ5 10.2
GTEX-139TT-0011-R1a-SM-5LZVD 10.1
GTEX-131XH-0011-R1a-SM-5DUWA 10.0
GTEX-PVOW-0011-R1A-SM-32PL6 9.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 9.5
GTEX-12WSE-0011-R1b-SM-5GU4V 9.3
GTEX-X585-0011-R1B-SM-46MVE 9.3
GTEX-YFC4-0011-R1a-SM-4V6EH 9.0
GTEX-13FXS-0011-R1a-SM-5K7U6 8.5
GTEX-P44H-0011-R1A-SM-3NM8J 8.1
GTEX-13X6I-0011-R1b-SM-5PNZC 7.6
GTEX-T6MN-0011-R1A-SM-32QOY 7.1
GTEX-14ASI-0011-R1b-SM-5S2TY 7.0
GTEX-N7MT-0011-R1a-SM-5SI7S 7.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 6.9
GTEX-13N1W-0011-R1b-SM-5MR4T 6.9
GTEX-13G51-0011-R1a-SM-5LZYR 6.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 6.7
GTEX-RNOR-0011-R1A-SM-5SI8F 6.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 6.4
GTEX-WWYW-0011-R1A-SM-3TW8G 6.3
GTEX-145MH-0011-R1b-SM-5PNWY 6.2
GTEX-12WSM-0011-R1a-SM-5LZW6 6.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 6.0
GTEX-XOTO-0011-R1B-SM-4B65C 5.9
GTEX-12WSF-0011-R1a-SM-5DUVI 5.9
GTEX-1313W-0011-R1b-SM-5EQ4A 5.8
GTEX-WL46-0011-R1A-SM-3LK6M 5.7
GTEX-13N2G-0011-R1b-SM-5MR3G 5.7
GTEX-QVJO-0011-R1A-SM-2S1QI 5.6
GTEX-13112-0011-R1b-SM-5HL7K 5.6
GTEX-13OW6-0011-R1a-SM-5L3HQ 5.6
GTEX-QDT8-0011-R1A-SM-32PKS 5.6
GTEX-13FLW-0011-R1b-SM-5LZX2 5.4
GTEX-WZTO-0011-R1B-SM-3NMAR 5.3
GTEX-QMR6-0011-R1A-SM-32PKW 5.2
GTEX-TSE9-0011-R1A-SM-3DB7E 5.1
GTEX-12WSD-0011-R1b-SM-5LZVY 5.1
GTEX-T5JC-0011-R1A-SM-32PM6 5.0
GTEX-S7SE-0011-R1A-SM-2XCDE 5.0
GTEX-R55E-0011-R1A-SM-2TC6N 5.0
GTEX-13OW7-0011-R1b-SM-5L3HF 5.0
GTEX-NPJ7-0011-R1a-SM-3GACT 4.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 4.6
GTEX-13NYB-0011-R1b-SM-5KM4F 4.6
GTEX-UTHO-0011-R1A-SM-3GIJO 4.3
GTEX-QVUS-0011-R1A-SM-3GAD2 4.3
GTEX-12WSH-0011-R1a-SM-5GU5V 4.3
GTEX-ZUA1-0011-R1a-SM-4YCE2 4.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 4.0
GTEX-13FHO-0011-R1b-SM-5KLZG 3.8
GTEX-13S7M-0011-R1b-SM-5PNZE 3.7
GTEX-11UD1-0011-R1b-SM-5BC7D 3.7
GTEX-X4XX-0011-R1B-SM-3P622 3.6
GTEX-13PDP-0011-R1a-SM-5PNX5 3.6
GTEX-13SLW-0011-R1a-SM-5S2W7 3.6
GTEX-145LS-0011-R1b-SM-5PNUP 3.5
GTEX-13NYS-0011-R1b-SM-5MR55 3.4
GTEX-WVLH-0011-R1A-SM-4MVOK 3.4
GTEX-13OVL-0011-R1a-SM-5L3H5 3.4
GTEX-1399T-0011-R1b-SM-5DUWN 3.4
GTEX-13OW5-0011-R1b-SM-5L3GE 3.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 3.3
GTEX-139T8-0011-R1a-SM-5HL75 3.3
GTEX-NPJ8-0011-R1a-SM-33HCB 3.2
GTEX-131YS-0011-R1a-SM-5DUXC 3.2
GTEX-11ONC-0011-R1a-SM-57WD4 3.2
GTEX-145LU-0011-R1a-SM-5Q5CE 3.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 2.9
GTEX-NL3H-0011-R1a-SM-48TDJ 2.8
GTEX-11GSO-0011-R1b-SM-57WD3 2.7
GTEX-13QJC-0011-R1b-SM-5S2UU 2.7
GTEX-132Q8-0011-R1a-SM-5EGLK 2.7
GTEX-PWO3-0011-R1A-SM-2I5EW 2.6
GTEX-YJ89-0011-R1a-SM-4RGLS 2.6
GTEX-1212Z-0011-R1b-SM-5BC72 2.5
GTEX-13JVG-0011-R1a-SM-5KM32 2.4
GTEX-13OW8-0011-R1a-SM-5L3HI 2.2
GTEX-11ZTS-0011-R1a-SM-5BC71 2.2
GTEX-12WSB-0011-R1b-SM-5P9EY 2.1
GTEX-ZF28-0011-R1a-SM-4WWD1 2.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 1.9
GTEX-XMD1-0011-R1A-SM-4AT4C 1.9
GTEX-144GO-0011-R1a-SM-5PNWO 1.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 1.8
GTEX-13CF2-0011-R1a-SM-5LZY1 1.6
GTEX-13FHP-0011-R1b-SM-5K7XL 1.6
GTEX-13NZA-0011-R1b-SM-5LUAF 1.6
GTEX-ZE7O-0011-R1a-SM-57WDM 1.3
GTEX-13FTY-0011-R1a-SM-5LZXE 1.3
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

28.1

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 28.1
FF:10169-103B7 60 years, female 35.0
FF:10153-102I9 76 years, female 26.5
FF:10374-105G5 89 years, female 22.9

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.