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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:83.9TPM
GTEx:25.3RPKM
FANTOM5:287.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA002199

 

Antibody CAB001716

 

Glandular cells

Medium   Low  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

83.9

overview Male, age 65
Sample 1
TPM: 48.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 116.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 83.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 88.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

25.3

GTEx sample id

RPKM

10.624.437.52.157.50510152025303540455055
 
10.624.437.52.157.50510152025303540455055

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 25.3
Samples: 88

Max RPKM: 57.5
Min RPKM: 2.1
Std RPKM: 16
Median RPKM: 24.4
GTEX-ZZ64-0526-SM-5GZXM 57.5
GTEX-1399S-2026-SM-5KM4B 55.4
GTEX-ZLV1-1126-SM-4WWBW 54.6
GTEX-111YS-1426-SM-5GID8 54.4
GTEX-ZPCL-1726-SM-57WEO 54.3
GTEX-11DXX-1626-SM-5H11H 54.1
GTEX-ZVZP-1826-SM-5GZXB 53.0
GTEX-ZYWO-1526-SM-5SIAL 51.5
GTEX-ZTSS-0926-SM-59865 51.1
GTEX-14DAR-1426-SM-5RQIR 48.2
GTEX-13D11-0726-SM-5LZZB 46.9
GTEX-YEC4-1726-SM-4W21E 45.6
GTEX-13FTW-2026-SM-5IJE2 44.7
GTEX-13PL7-2626-SM-5IFH4 44.6
GTEX-11P7K-1626-SM-5GU63 43.7
GTEX-11EQ9-1326-SM-5985X 43.7
GTEX-11I78-1126-SM-5A5K5 42.2
GTEX-XXEK-1026-SM-4BRUW 41.8
GTEX-ZTX8-0526-SM-59HLD 41.4
GTEX-YB5E-1526-SM-5IFIE 40.0
GTEX-13113-1226-SM-5EGHT 37.9
GTEX-11P82-0826-SM-5P9GU 37.8
GTEX-1122O-1326-SM-5H11F 37.4
GTEX-145LT-1026-SM-5LU9O 35.7
GTEX-YF7O-1826-SM-5IFIU 34.8
GTEX-139YR-2226-SM-5IFFW 34.1
GTEX-Y9LG-1626-SM-5IFHM 34.0
GTEX-11DXZ-1326-SM-5H11X 33.1
GTEX-ZVP2-1726-SM-5GU5P 32.5
GTEX-ZXES-1526-SM-5NQ95 32.4
GTEX-XBED-1426-SM-4AT4G 31.4
GTEX-ZYFG-2026-SM-5E43Y 30.7
GTEX-131XF-1326-SM-5GCMQ 30.3
GTEX-XUZC-1426-SM-4BRV3 28.9
GTEX-1399R-2026-SM-5K7WN 28.8
GTEX-139T6-1026-SM-5IJGC 28.3
GTEX-WFJO-0926-SM-4LVM2 28.1
GTEX-ZEX8-1826-SM-57WBH 27.4
GTEX-ZLFU-1526-SM-4WWBT 27.2
GTEX-XGQ4-1326-SM-4GIDU 27.1
GTEX-13CF3-1226-SM-5LZXN 26.6
GTEX-ZVT2-2126-SM-5NQ93 26.6
GTEX-133LE-1426-SM-5IFH1 24.6
GTEX-Y114-1426-SM-4TT6W 24.4
GTEX-11XUK-1426-SM-5EQMG 24.4
GTEX-11NSD-1726-SM-5N9C3 23.6
GTEX-ZTPG-2626-SM-57WFX 22.5
GTEX-14E6E-1626-SM-5RQI7 22.5
GTEX-WQUQ-2426-SM-4MVNW 22.0
GTEX-12BJ1-1926-SM-5HL9Z 21.7
GTEX-13FH7-1226-SM-5IJFK 20.8
GTEX-ZA64-1226-SM-5HL7B 19.4
GTEX-XAJ8-0526-SM-47JYK 18.7
GTEX-X5EB-1626-SM-4E3IV 18.4
GTEX-13O21-1026-SM-5IJDU 17.7
GTEX-WFG7-1726-SM-4LVME 17.6
GTEX-1399U-2126-SM-5IFEZ 17.0
GTEX-13O61-1326-SM-5KM31 17.0
GTEX-Z9EW-0926-SM-5CVMM 16.9
GTEX-ZP4G-1626-SM-57WGD 13.8
GTEX-WH7G-1626-SM-4LVMY 13.1
GTEX-ZPIC-2326-SM-57WDW 12.6
GTEX-11VI4-1626-SM-5EQKO 11.0
GTEX-Y3IK-1726-SM-4YCCR 11.0
GTEX-145ME-0926-SM-5O9AR 10.9
GTEX-X15G-1426-SM-4PQZK 10.7
GTEX-13QBU-1926-SM-5IJEW 10.2
GTEX-13RTK-0826-SM-5Q5C6 9.8
GTEX-WRHK-1026-SM-4MVOD 9.4
GTEX-12WSK-1526-SM-5CVNO 8.6
GTEX-148VJ-2226-SM-5NQ9M 8.4
GTEX-131XG-1726-SM-5LZUR 7.7
GTEX-VJYA-0926-SM-4KL1N 7.4
GTEX-VUSG-1726-SM-4KKZL 7.3
GTEX-Y5LM-1626-SM-4VDTB 7.2
GTEX-ZQG8-2526-SM-57WEQ 6.2
GTEX-WFG8-1626-SM-4LVMB 5.8
GTEX-1192X-2526-SM-59868 5.3
GTEX-ZQUD-0926-SM-57WE3 4.9
GTEX-ZF2S-1726-SM-57WFT 4.7
GTEX-UPK5-2026-SM-4JBIM 4.4
GTEX-111CU-1326-SM-5NQ8L 4.4
GTEX-13111-1426-SM-5DUW3 4.1
GTEX-13OVI-1926-SM-5IJCG 3.8
GTEX-WEY5-1526-SM-4LMJF 3.6
GTEX-ZC5H-2326-SM-4WAYT 3.2
GTEX-117YX-0326-SM-5GICL 2.8
GTEX-XMK1-1826-SM-4B66F 2.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

287.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 287.7
FF:10024-101D6 15,40,85 years, mixed 287.7

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The Human Protein Atlas project is funded
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