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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:108.0TPM
GTEx:63.1RPKM
FANTOM5:68.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not detected
Fibroblasts:Low
Adipocytes:Not available
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA035873

  

Antibody HPA035874

  

Antibody CAB009794

  

Chondrocytes

 Not detected  

Fibroblasts

 Low   Medium   Not detected  

Adipocytes

 Medium   Not detected  

Peripheral nerve

 Medium  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA035873

  

Antibody HPA035874

  

Antibody CAB009794

  

Adipocytes

 Not detected   Medium   Not detected  

Fibroblasts

 Medium   Medium   Not detected  

Peripheral nerve

 Medium   Medium   Medium  
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

108.0
N/A Female, age 80
Sample 1
TPM: 119.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 104.5
N/A Female, age 57
Sample 3
TPM: 99.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 113.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 103.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

63.1

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 66.6
Samples: 350

Max RPKM: 96.9
Min RPKM: 33.4
Std RPKM: 8.8
Median RPKM: 67.4
GTEX-13OW6-0526-SM-5L3HY 96.9
GTEX-13QJ3-0426-SM-5RQHP 91.8
GTEX-OOBJ-0226-SM-2YUMM 90.1
GTEX-145MF-0526-SM-5LUA6 90.0
GTEX-131XF-2226-SM-5EQKG 89.4
GTEX-11P7K-2026-SM-5GU74 87.5
GTEX-13OVL-0326-SM-5IJCS 84.6
GTEX-UTHO-0426-SM-5SI7N 84.3
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 57.7
Samples: 227

Max RPKM: 84.5
Min RPKM: 36.2
Std RPKM: 9
Median RPKM: 58.3
GTEX-ZUA1-2126-SM-57YRB 84.5
GTEX-13OW7-1126-SM-5K7V6 82.0
GTEX-ZDXO-2326-SM-5LU9W 78.6
GTEX-X3Y1-0926-SM-3P5YT 76.3
GTEX-11DXX-2026-SM-5EGJL 74.5
GTEX-X585-2526-SM-4QAS1 73.8
GTEX-11NV4-1426-SM-5BC4W 72.9
GTEX-12WSA-1626-SM-5EGJV 72.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

68.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 68.2
FF:10010-101C1 65,65,76 years, mixed 68.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.