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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:201.7TPM
GTEx:71.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Not detected
Neuropil:Medium
 

Antibody staining

Antibody HPA035873

 

Antibody HPA035874

 

Antibody CAB009794

 

Endothelial cells

Low   Medium   Not detected  

Glial cells

Low   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Not detected  

Neuropil

Medium   Medium   Low  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

201.7

N/A Male, age 5
Sample 1
TPM: 208.3
overview Female, age 40
Sample 2
TPM: 209.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 187.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

71.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 75.6
Samples: 114

Max RPKM: 104.3
Min RPKM: 52.4
Std RPKM: 8.5
Median RPKM: 76
GTEX-QVUS-2826-SM-3GADB 104.3
GTEX-1192X-3126-SM-5N9BY 99.1
GTEX-NPJ8-1526-SM-2D7VU 99.0
GTEX-13FHO-3026-SM-5J1O9 96.0
GTEX-144FL-3026-SM-5O99C 92.9
GTEX-12ZZY-3026-SM-5GCOU 90.5
GTEX-13OW6-3026-SM-5J2MI 89.1
GTEX-13OVJ-2826-SM-5L3GW 85.6
GTEX-OXRN-2426-SM-2I5EQ 85.6
GTEX-1445S-3026-SM-5O9BR 85.1
GTEX-14BMV-3026-SM-5S2PQ 84.7
GTEX-11ONC-2926-SM-5P9JM 84.5
GTEX-ZZPT-3026-SM-5GZXH 84.4
GTEX-13FXS-3126-SM-5J2NN 83.7
GTEX-145MF-2726-SM-5O995 83.4
GTEX-139T8-1026-SM-5J2MC 83.2
GTEX-14ASI-3026-SM-5S2PN 83.2
GTEX-QVJO-1426-SM-2S1QY 82.5
GTEX-13OW8-2826-SM-5L3GC 82.4
GTEX-QMR6-1426-SM-32PLA 82.4
GTEX-13NYS-3126-SM-5KLYV 82.3
GTEX-WL46-2926-SM-3LK82 82.3
GTEX-11GS4-3126-SM-5A5LH 82.2
GTEX-YFC4-3126-SM-5PNV6 82.1
GTEX-N7MT-1126-SM-5SI7V 81.8
GTEX-13OVH-3026-SM-5MR4N 81.7
GTEX-XLM4-3026-SM-4AT6L 81.0
GTEX-13NYB-3026-SM-5IJD7 80.6
GTEX-11GSO-2926-SM-5HL73 79.7
GTEX-QDT8-2926-SM-32PKC 79.7
GTEX-13G51-3026-SM-5IJB8 79.6
GTEX-12WSA-2926-SM-5EQ4D 79.4
GTEX-144GL-3026-SM-5Q5CW 79.2
GTEX-WZTO-2926-SM-3NM9I 79.1
GTEX-WHSE-3026-SM-3P5ZH 79.0
GTEX-R55F-1326-SM-5S2V4 78.8
GTEX-111FC-3126-SM-5GZZ2 78.7
GTEX-12ZZX-2926-SM-5GCOQ 78.7
GTEX-13FHP-3026-SM-5IJBS 78.6
GTEX-14A5I-2926-SM-5Q5CQ 78.5
GTEX-11DXY-3226-SM-5GIDE 78.4
GTEX-12ZZW-2926-SM-5LZUP 78.4
GTEX-T6MN-2626-SM-32PMQ 78.3
GTEX-T5JC-2426-SM-3NMDB 78.2
GTEX-XOTO-3026-SM-4B65M 78.2
GTEX-Q2AG-2926-SM-2HMJ3 78.0
GTEX-WWYW-3126-SM-3NB39 78.0
GTEX-NPJ7-2726-SM-2I3FT 77.8
GTEX-RNOR-2326-SM-2TF4I 77.7
GTEX-1313W-3126-SM-5LZUI 77.5
GTEX-132Q8-3026-SM-5PNVG 77.5
GTEX-1128S-2726-SM-5H12C 77.2
GTEX-X4XX-3026-SM-3NMB2 77.0
GTEX-13JUV-2926-SM-5LZX7 76.9
GTEX-ZUA1-3026-SM-59HJC 76.4
GTEX-WVLH-3026-SM-3MJG9 76.1
GTEX-ZYFD-3026-SM-5E44C 76.1
GTEX-13QIC-2926-SM-5J2NF 76.0
GTEX-1117F-3226-SM-5N9CT 75.6
GTEX-UTHO-3026-SM-3GAFB 75.4
GTEX-11OF3-2926-SM-5HL78 75.2
GTEX-11DXW-1126-SM-5H12Q 74.9
GTEX-ZVT3-3026-SM-5E43N 74.9
GTEX-13FLW-1426-SM-5K7YE 74.4
GTEX-11EMC-3226-SM-5EGKW 74.3
GTEX-12WSC-3026-SM-5GCNF 74.3
GTEX-145MH-3026-SM-5Q5DZ 74.3
GTEX-13S7M-3126-SM-5RQJQ 74.2
GTEX-Y111-2726-SM-4TT3N 74.1
GTEX-ZAJG-3126-SM-5HL9J 74.1
GTEX-11NUK-2926-SM-5A5MD 74.0
GTEX-13NYC-2826-SM-5K7WR 73.9
GTEX-145MG-3026-SM-5RQJA 73.3
GTEX-12126-1026-SM-5P9JJ 72.8
GTEX-13O3Q-2926-SM-5KM45 72.6
GTEX-X585-3026-SM-46MWF 72.0
GTEX-13JVG-3126-SM-5L3FH 71.9
GTEX-13O3O-3126-SM-5KM3H 71.9
GTEX-12WSD-3126-SM-5HL7P 71.7
GTEX-13VXU-2926-SM-5LU5C 71.5
GTEX-13SLX-3126-SM-5S2Q5 71.4
GTEX-1399T-3026-SM-5KLZC 71.3
GTEX-145LS-3126-SM-5Q5BY 71.1
GTEX-131XW-3126-SM-5LZUC 70.8
GTEX-11PRG-2926-SM-5987A 70.6
GTEX-YJ89-3026-SM-5IFJI 70.0
GTEX-ZAK1-3026-SM-5S2MJ 69.9
GTEX-11EI6-3026-SM-5GZZO 69.8
GTEX-13PVQ-3026-SM-5SI93 69.6
GTEX-Z93S-2926-SM-57WB9 69.3
GTEX-13PL6-3126-SM-5LUAR 68.8
GTEX-13OW7-3026-SM-5L3GY 68.6
GTEX-12ZZZ-3026-SM-5BC67 68.2
GTEX-117XS-3026-SM-5N9CA 67.3
GTEX-131YS-3126-SM-5KLYT 67.1
GTEX-11GSP-3226-SM-5986O 66.1
GTEX-11WQK-3026-SM-5EQL6 66.1
GTEX-RU72-3026-SM-5SI7Y 66.1
GTEX-11ZUS-2926-SM-5FQSL 66.0
GTEX-TSE9-3026-SM-3DB76 65.5
GTEX-PWO3-0926-SM-2I5EY 65.0
GTEX-PVOW-2526-SM-2XCF7 64.9
GTEX-ZE7O-3126-SM-5HL5X 64.7
GTEX-11TTK-2926-SM-5PNYP 64.6
GTEX-Y8DK-0826-SM-4TT3T 64.4
GTEX-T2IS-3026-SM-32QPM 63.7
GTEX-13X6K-2926-SM-5Q5D5 63.4
GTEX-12WSH-3026-SM-5CVNI 62.2
GTEX-11OC5-0726-SM-5P9JK 62.1
GTEX-13X6J-3026-SM-5Q5CU 61.1
GTEX-11O72-2926-SM-5BC4V 60.4
GTEX-147GR-3026-SM-5S2ML 60.3
GTEX-13IVO-2926-SM-5L3CZ 59.0
GTEX-11NV4-2126-SM-5N9DS 52.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 68.0
Samples: 108

Max RPKM: 91.9
Min RPKM: 36.2
Std RPKM: 10.2
Median RPKM: 69.9
GTEX-13CZV-0011-R10b-SM-5LZYD 91.9
GTEX-13FHO-0011-R10b-SM-5J2MM 90.4
GTEX-13X6K-0011-R10a-SM-5P9JR 86.0
GTEX-14BIL-0011-R10a-SM-5SI75 84.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 81.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 81.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 80.8
GTEX-13OW6-0011-R10a-SM-5L3HE 80.3
GTEX-13NYS-0011-R10a-SM-5MR4S 79.4
GTEX-WWYW-0011-R10A-SM-3NB35 79.3
GTEX-131XH-0011-R10a-SM-5EGLJ 79.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 78.8
GTEX-145MG-0011-R10a-SM-5PNWG 78.5
GTEX-13S7M-0011-R10b-SM-5PNZB 77.9
GTEX-13JUV-0011-R10b-SM-5LZXR 77.8
GTEX-1445S-0011-R10a-SM-5PNWB 77.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 77.6
GTEX-NL3H-0011-R10A-SM-2I3E9 77.5
GTEX-S7SE-0011-R10A-SM-2XCDF 77.5
GTEX-11H98-0011-R10b-SM-5NQ98 77.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 77.0
GTEX-13SLW-0011-R10a-SM-5S2UI 76.7
GTEX-XLM4-0011-R10A-SM-4AT5P 76.7
GTEX-13RTJ-0011-R10b-SM-5O9CW 76.2
GTEX-13OVL-0011-R10a-SM-5L3GS 75.8
GTEX-13N1W-0011-R10b-SM-5MR4H 75.3
GTEX-RVPU-0011-R10A-SM-2XCAH 75.0
GTEX-X585-0011-R10A-SM-46MUY 75.0
GTEX-QVJO-0011-R10A-SM-2S1QJ 74.8
GTEX-YFC4-0011-R10a-SM-4SOK5 74.7
GTEX-ZF28-0011-R10a-SM-4WWEH 74.4
GTEX-N7MT-0011-R10A-SM-2I3E1 74.3
GTEX-13FXS-0011-R10a-SM-5J2MA 73.5
GTEX-T5JC-0011-R10A-SM-32PM2 73.3
GTEX-WVLH-0011-R10A-SM-3MJFM 73.3
GTEX-12WSA-0011-R10b-SM-5P9ET 73.0
GTEX-12WSM-0011-R10a-SM-5DUWV 72.7
GTEX-12WSE-0011-R10b-SM-5P9JV 72.5
GTEX-QDT8-0011-R10A-SM-32PKG 72.3
GTEX-145MH-0011-R10b-SM-5PNUK 72.1
GTEX-12ZZX-0011-R10b-SM-5DUWK 71.9
GTEX-X4XX-0011-R10B-SM-46MWO 71.7
GTEX-12WSF-0011-R10a-SM-5LZVH 71.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 71.3
GTEX-13O3O-0011-R10a-SM-5LUA9 70.7
GTEX-YJ89-0011-R10a-SM-4SOK9 70.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 70.5
GTEX-13OW7-0011-R10a-SM-5L3H3 70.4
GTEX-13FLW-0011-R10b-SM-5LZZF 70.3
GTEX-11WQC-0011-R10a-SM-57WCT 70.0
GTEX-147GR-0011-R10b-SM-5S2UM 70.0
GTEX-NL4W-0011-R10A-SM-2I3DY 70.0
GTEX-XMD1-0011-R10A-SM-4AT4A 70.0
GTEX-13OW8-0011-R10a-SM-5L3H6 69.9
GTEX-T6MN-0011-R10A-SM-32QP7 69.9
GTEX-13X6I-0011-R10a-SM-5PNWI 69.7
GTEX-WZTO-0011-R10B-SM-4E3KB 69.6
GTEX-147F4-0011-R10b-SM-5S2WC 69.4
GTEX-13QIC-0011-R10a-SM-5O9C7 69.0
GTEX-WL46-0011-R10A-SM-3MJFQ 68.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 68.8
GTEX-OXRN-0011-R10A-SM-2I5GC 68.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 67.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 67.3
GTEX-N7MS-0011-R10A-SM-2HMJK 67.1
GTEX-1313W-0011-R10b-SM-5DUXA 66.9
GTEX-131YS-0011-R10b-SM-5EQ5N 66.7
GTEX-145LU-0011-R10a-SM-5PNWJ 66.5
GTEX-P44H-0011-R10A-SM-2XCEK 66.5
GTEX-Y8DK-0011-R10A-SM-4SOK1 66.4
GTEX-13O3Q-0011-R10b-SM-5KM39 65.9
GTEX-11GSP-0011-R10a-SM-5NQ7J 65.8
GTEX-QMR6-0011-R10A-SM-32PKO 65.8
GTEX-12WSH-0011-R10a-SM-5LZUS 65.3
GTEX-145LS-0011-R10a-SM-5PNUQ 64.6
GTEX-13QJC-0011-R10a-SM-5SI63 64.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC 64.0
GTEX-12WSC-0011-R10a-SM-5GU57 63.9
GTEX-QVUS-0011-R10A-SM-3GIK3 63.7
GTEX-14BIN-0011-R10a-SM-5S2UA 63.5
GTEX-13SLX-0011-R10a-SM-5P9HV 63.0
GTEX-TSE9-0011-R10A-SM-3DB7O 61.8
GTEX-13X6J-0011-R10b-SM-5PNWA 61.2
GTEX-12126-0011-R10b-SM-5BC6T 60.8
GTEX-1477Z-0011-R10b-SM-5S2RF 60.5
GTEX-13FTZ-0011-R10b-SM-5KLZS 59.3
GTEX-13NYB-0011-R10a-SM-5KM43 59.2
GTEX-13G51-0011-R10b-SM-5LZYF 58.8
GTEX-Z93S-0011-R10a-SM-4RGNM 58.8
GTEX-13N2G-0011-R10a-SM-5MR34 58.7
GTEX-11ZUS-0011-R10b-SM-5BC79 57.5
GTEX-ZVT3-0011-R10b-SM-57WB6 56.3
GTEX-11WQK-0011-R10a-SM-5BC6R 55.6
GTEX-14753-0011-R10b-SM-5S2WE 55.1
GTEX-ZUA1-0011-R10a-SM-51MT6 54.7
GTEX-ZV68-0011-R10a-SM-51MT7 54.6
GTEX-12WSD-0011-R10b-SM-5GU79 54.2
GTEX-X4EP-0011-R10B-SM-4QASJ 54.1
GTEX-13JVG-0011-R10b-SM-5KM2P 53.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 52.8
GTEX-139TS-0011-R10a-SM-5K7TU 49.9
GTEX-X261-0011-R10B-SM-4E3JT 49.5
GTEX-ZXG5-0011-R10a-SM-57WDD 48.1
GTEX-131XW-0011-R10a-SM-5DUVA 47.7
GTEX-13NZA-0011-R10b-SM-5KM54 44.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 43.3
GTEX-OXRO-0011-R10A-SM-2I5EH 43.2
GTEX-13IVO-0011-R10a-SM-5LZY3 36.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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