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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:82.0TPM
GTEx:60.8RPKM
FANTOM5:118.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA035873

 

Antibody HPA035874

 

Antibody CAB009794

 

Glandular cells

High   Medium   Medium  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

82.0

overview Male, age 65
Sample 1
TPM: 76.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 75.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 87.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 88.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

60.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 60.8
Samples: 88

Max RPKM: 88.5
Min RPKM: 45.3
Std RPKM: 9.9
Median RPKM: 59.5
GTEX-ZF2S-1726-SM-57WFT 88.5
GTEX-ZQUD-0926-SM-57WE3 88.1
GTEX-117YX-0326-SM-5GICL 87.0
GTEX-13O21-1026-SM-5IJDU 81.2
GTEX-1192X-2526-SM-59868 79.6
GTEX-13QBU-1926-SM-5IJEW 78.7
GTEX-12WSK-1526-SM-5CVNO 78.1
GTEX-XMK1-1826-SM-4B66F 75.1
GTEX-13111-1426-SM-5DUW3 74.7
GTEX-145ME-0926-SM-5O9AR 74.3
GTEX-ZC5H-2326-SM-4WAYT 72.7
GTEX-ZP4G-1626-SM-57WGD 72.6
GTEX-WH7G-1626-SM-4LVMY 72.2
GTEX-131XG-1726-SM-5LZUR 71.3
GTEX-WEY5-1526-SM-4LMJF 70.8
GTEX-WRHK-1026-SM-4MVOD 70.3
GTEX-13OVI-1926-SM-5IJCG 69.7
GTEX-111CU-1326-SM-5NQ8L 69.5
GTEX-WFJO-0926-SM-4LVM2 69.2
GTEX-Y114-1426-SM-4TT6W 68.0
GTEX-11NSD-1726-SM-5N9C3 68.0
GTEX-X15G-1426-SM-4PQZK 67.7
GTEX-VUSG-1726-SM-4KKZL 67.2
GTEX-148VJ-2226-SM-5NQ9M 66.7
GTEX-Y5LM-1626-SM-4VDTB 66.5
GTEX-ZQG8-2526-SM-57WEQ 66.2
GTEX-13O61-1326-SM-5KM31 65.9
GTEX-Y3IK-1726-SM-4YCCR 64.5
GTEX-Z9EW-0926-SM-5CVMM 64.0
GTEX-XAJ8-0526-SM-47JYK 63.8
GTEX-11VI4-1626-SM-5EQKO 63.8
GTEX-WFG7-1726-SM-4LVME 62.1
GTEX-11P7K-1626-SM-5GU63 61.8
GTEX-13RTK-0826-SM-5Q5C6 61.5
GTEX-13FH7-1226-SM-5IJFK 61.3
GTEX-ZEX8-1826-SM-57WBH 60.9
GTEX-ZLFU-1526-SM-4WWBT 60.5
GTEX-ZVT2-2126-SM-5NQ93 60.4
GTEX-139T6-1026-SM-5IJGC 60.1
GTEX-12BJ1-1926-SM-5HL9Z 60.0
GTEX-14E6E-1626-SM-5RQI7 60.0
GTEX-11P82-0826-SM-5P9GU 59.7
GTEX-1399U-2126-SM-5IFEZ 59.5
GTEX-WFG8-1626-SM-4LVMB 59.5
GTEX-11XUK-1426-SM-5EQMG 59.4
GTEX-UPK5-2026-SM-4JBIM 59.2
GTEX-131XF-1326-SM-5GCMQ 58.5
GTEX-13113-1226-SM-5EGHT 58.3
GTEX-XBED-1426-SM-4AT4G 58.2
GTEX-11EQ9-1326-SM-5985X 57.3
GTEX-ZVP2-1726-SM-5GU5P 57.0
GTEX-ZPIC-2326-SM-57WDW 57.0
GTEX-ZZ64-0526-SM-5GZXM 56.9
GTEX-ZXES-1526-SM-5NQ95 56.7
GTEX-ZTPG-2626-SM-57WFX 56.5
GTEX-14DAR-1426-SM-5RQIR 56.4
GTEX-ZLV1-1126-SM-4WWBW 55.9
GTEX-WQUQ-2426-SM-4MVNW 55.7
GTEX-ZYWO-1526-SM-5SIAL 55.6
GTEX-1399S-2026-SM-5KM4B 55.6
GTEX-145LT-1026-SM-5LU9O 54.8
GTEX-11DXX-1626-SM-5H11H 54.2
GTEX-1399R-2026-SM-5K7WN 52.8
GTEX-XGQ4-1326-SM-4GIDU 52.6
GTEX-XUZC-1426-SM-4BRV3 52.6
GTEX-139YR-2226-SM-5IFFW 52.4
GTEX-13FTW-2026-SM-5IJE2 52.2
GTEX-13PL7-2626-SM-5IFH4 52.2
GTEX-YB5E-1526-SM-5IFIE 51.8
GTEX-11I78-1126-SM-5A5K5 51.8
GTEX-YF7O-1826-SM-5IFIU 51.7
GTEX-X5EB-1626-SM-4E3IV 51.6
GTEX-ZYFG-2026-SM-5E43Y 51.3
GTEX-11DXZ-1326-SM-5H11X 51.3
GTEX-13D11-0726-SM-5LZZB 50.9
GTEX-ZA64-1226-SM-5HL7B 50.8
GTEX-ZTX8-0526-SM-59HLD 50.5
GTEX-1122O-1326-SM-5H11F 50.3
GTEX-ZPCL-1726-SM-57WEO 50.2
GTEX-ZVZP-1826-SM-5GZXB 49.8
GTEX-133LE-1426-SM-5IFH1 49.2
GTEX-Y9LG-1626-SM-5IFHM 48.4
GTEX-ZTSS-0926-SM-59865 48.3
GTEX-13CF3-1226-SM-5LZXN 48.3
GTEX-111YS-1426-SM-5GID8 47.6
GTEX-YEC4-1726-SM-4W21E 47.5
GTEX-XXEK-1026-SM-4BRUW 45.6
GTEX-VJYA-0926-SM-4KL1N 45.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

118.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 118.4
FF:10024-101D6 15,40,85 years, mixed 118.4

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The Human Protein Atlas project is funded
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