We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ASAP3
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:8.2TPM
GTEx:14.2RPKM
FANTOM5:13.8Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA020537

 

Antibody HPA020546

 

Adipocytes

Not detected   Not detected  

Glandular cells

Not detected   Not detected  

Myoepithelial cells

Not detected   Not detected  
   
   
   

BREAST - HPA RNA-seq

Average TPM

8.2

overview Female, age 52
Sample 1
TPM: 6.5
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 15.9
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 5.1
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 5.2
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

14.2

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 14.2
Samples: 214

Max RPKM: 30.6
Min RPKM: 3.4
Std RPKM: 4.8
Median RPKM: 13.8
GTEX-13O3P-0826-SM-5L3DH 30.6
GTEX-SIU7-1626-SM-4BRUK 26.3
GTEX-X15G-1626-SM-3NMB3 25.1
GTEX-X4EP-2926-SM-3P5YQ 25.0
GTEX-ZAJG-0626-SM-5HL8X 24.7
GTEX-13NZ9-1026-SM-5MR5K 24.4
GTEX-13D11-1026-SM-5IJFB 24.2
GTEX-U3ZN-1926-SM-4DXSG 24.1
GTEX-UJHI-1426-SM-3DB9C 23.8
GTEX-132NY-0826-SM-5K7Y7 23.5
GTEX-R3RS-0626-SM-48FE1 22.6
GTEX-XOT4-0726-SM-4GIAW 22.4
GTEX-13FHO-0826-SM-5L3E8 22.3
GTEX-TMMY-0726-SM-33HBE 22.2
GTEX-1269C-2426-SM-5FQSN 22.1
GTEX-13NZ8-0126-SM-5IJCT 21.6
GTEX-YFC4-1426-SM-5IFJG 20.8
GTEX-13O3Q-2226-SM-5KM4O 20.6
GTEX-XUZC-1626-SM-4BRVP 20.6
GTEX-11LCK-2426-SM-5HL5F 20.3
GTEX-ZEX8-2226-SM-57WC6 20.3
GTEX-VJWN-0726-SM-3GIJ8 20.0
GTEX-WYBS-0926-SM-3NM94 19.9
GTEX-VUSG-2226-SM-4KKZO 19.8
GTEX-XUJ4-1926-SM-4BOOV 19.7
GTEX-12WSK-2226-SM-5GCO5 19.5
GTEX-146FH-0826-SM-5SI8T 19.5
GTEX-Q2AG-0326-SM-48U1O 19.5
GTEX-131YS-0626-SM-5EGKL 19.4
GTEX-139T8-0826-SM-5L3DE 19.4
GTEX-QDT8-0626-SM-48TYW 19.3
GTEX-WI4N-1426-SM-3LK7H 19.1
GTEX-Y5V5-2126-SM-4WWFO 19.1
GTEX-11I78-2226-SM-5PNYA 18.8
GTEX-XBED-1626-SM-47JYN 18.7
GTEX-S341-1526-SM-4AD6K 18.6
GTEX-S4P3-1326-SM-4AD6V 18.6
GTEX-WYJK-1326-SM-3NB2T 18.6
GTEX-1211K-1926-SM-5EQLB 18.5
GTEX-ZF29-1926-SM-5S2P1 18.5
GTEX-ZXES-0826-SM-5E43C 18.5
GTEX-ZZPU-0626-SM-5E43T 18.5
GTEX-11NSD-0926-SM-5N9DR 18.4
GTEX-1192X-2326-SM-5987X 18.3
GTEX-13PL6-2926-SM-5L3I2 18.3
GTEX-WYVS-1726-SM-3NMAY 18.3
GTEX-132AR-0826-SM-5EGK6 18.2
GTEX-UPK5-2326-SM-3P5Z8 18.0
GTEX-RWS6-1926-SM-47JXY 17.9
GTEX-ZVE2-1226-SM-5NQ8R 17.8
GTEX-12ZZX-1126-SM-5EGKB 17.7
GTEX-XUW1-2326-SM-4BOO5 17.7
GTEX-11WQC-1726-SM-5GU4W 17.3
GTEX-RU72-0626-SM-46MUI 17.2
GTEX-ZA64-1526-SM-5CVMD 17.1
GTEX-S4Q7-1126-SM-4AD6R 17.0
GTEX-Y3I4-1526-SM-4TT7K 17.0
GTEX-132Q8-1426-SM-5EGK7 16.9
GTEX-13FTY-2226-SM-5J1ND 16.9
GTEX-ZV6S-1826-SM-5NQ8D 16.9
GTEX-13N1W-0626-SM-5MR4U 16.8
GTEX-Y3IK-2326-SM-4WWDT 16.8
GTEX-Y8LW-1626-SM-5IFHX 16.8
GTEX-ZC5H-2626-SM-5J2MG 16.8
GTEX-1122O-1226-SM-5H113 16.6
GTEX-TML8-1226-SM-32QON 16.6
GTEX-145MN-1926-SM-5SIAI 16.4
GTEX-R53T-1526-SM-48FEK 16.4
GTEX-WRHU-0326-SM-3MJFY 16.4
GTEX-YFCO-1826-SM-4W1YH 16.4
GTEX-ZDTT-2126-SM-5S2OJ 16.4
GTEX-12WSB-0626-SM-59HJO 16.3
GTEX-U3ZH-1426-SM-4DXSR 16.3
GTEX-QMRM-1626-SM-4R1KV 16.2
GTEX-SE5C-2126-SM-4BRUJ 16.2
GTEX-X4XY-0926-SM-4E3JD 16.2
GTEX-ZYWO-2326-SM-5GZY4 16.2
GTEX-ZLV1-1426-SM-4WWES 16.1
GTEX-XV7Q-2326-SM-4BRVZ 15.9
GTEX-S33H-0326-SM-4AD6N 15.8
GTEX-ZDXO-0126-SM-5S2ND 15.8
GTEX-T2IS-1526-SM-32QPR 15.7
GTEX-XMD2-0926-SM-4WWEF 15.7
GTEX-XMK1-1126-SM-4IHJ8 15.6
GTEX-ZY6K-1626-SM-5GZWV 15.6
GTEX-QVJO-1826-SM-447C9 15.5
GTEX-13N11-1726-SM-5J1OJ 15.4
GTEX-13O3O-0826-SM-5K7WE 15.3
GTEX-ZYW4-0826-SM-5GIDG 15.3
GTEX-11EI6-0626-SM-5985T 15.2
GTEX-W5X1-2326-SM-3GIL6 15.2
GTEX-139T6-1626-SM-5PNYZ 15.1
GTEX-S4UY-0726-SM-4AD6X 15.0
GTEX-11EMC-2026-SM-5A5JV 14.9
GTEX-1399U-1826-SM-5PNZ1 14.9
GTEX-XYKS-1326-SM-4BRUN 14.8
GTEX-11EM3-1326-SM-5N9C6 14.7
GTEX-WXYG-2226-SM-4E3IM 14.5
GTEX-XQ3S-1326-SM-4BOPQ 14.5
GTEX-14753-2426-SM-5LU8U 14.3
GTEX-T6MO-0326-SM-32QOK 14.3
GTEX-144GL-2026-SM-5LU3O 14.1
GTEX-T5JC-2126-SM-32PMO 14.1
GTEX-ZF2S-2026-SM-5E461 14.1
GTEX-Y5LM-1726-SM-4VDSX 14.0
GTEX-13W3W-1226-SM-5LU4H 13.9
GTEX-11OF3-1926-SM-59889 13.8
GTEX-S32W-2026-SM-4AD6E 13.8
GTEX-ZVT2-1826-SM-5NQ8W 13.8
GTEX-13NZB-2126-SM-5MR4Y 13.7
GTEX-T6MN-0726-SM-32PML 13.6
GTEX-TKQ2-1826-SM-33HB2 13.6
GTEX-11ONC-2126-SM-5HL6E 13.5
GTEX-14AS3-1626-SM-5S2OY 13.5
GTEX-11NV4-2026-SM-5N9DG 13.4
GTEX-131XW-0726-SM-5EGK3 13.4
GTEX-133LE-1726-SM-5K7VQ 13.4
GTEX-11P81-1926-SM-5BC53 13.3
GTEX-ZYT6-0126-SM-5E45J 13.3
GTEX-11EQ9-1826-SM-5Q5AJ 13.2
GTEX-XGQ4-0926-SM-4AT4U 13.1
GTEX-Y8E4-1626-SM-5S2MW 13.1
GTEX-11GS4-2126-SM-5A5KR 13.0
GTEX-13W46-0826-SM-5LU3H 13.0
GTEX-ZPIC-1126-SM-5BC7F 13.0
GTEX-ZVZQ-0826-SM-51MRF 13.0
GTEX-11ZUS-0826-SM-5FQUY 12.8
GTEX-11DXW-0626-SM-5N9ER 12.7
GTEX-11DXY-2326-SM-5GICW 12.6
GTEX-T5JW-2026-SM-4DM63 12.6
GTEX-U412-1826-SM-4DXTJ 12.6
GTEX-ZYFC-0826-SM-5E44K 12.6
GTEX-ZV7C-1826-SM-5NQ83 12.5
GTEX-ZWKS-2826-SM-5NQ74 12.5
GTEX-T2YK-2226-SM-32QPT 12.3
GTEX-13FTX-1126-SM-5N9EN 12.2
GTEX-S7SE-0826-SM-4AT4D 12.2
GTEX-13S86-1226-SM-5S2OA 12.0
GTEX-145LT-0726-SM-5S2VM 12.0
GTEX-ZU9S-1926-SM-5NQBP 12.0
GTEX-13QIC-2326-SM-5LU5N 11.9
GTEX-12BJ1-1826-SM-5HL9N 11.8
GTEX-1313W-0826-SM-5EQ4T 11.8
GTEX-X261-0626-SM-3NMD9 11.8
GTEX-11GSO-1926-SM-5A5K3 11.7
GTEX-139TU-0626-SM-5KM3X 11.7
GTEX-1314G-1226-SM-5BC6D 11.6
GTEX-147F4-2826-SM-5NQBN 11.5
GTEX-XMD1-0826-SM-4AT52 11.5
GTEX-13113-1726-SM-5GCOO 11.3
GTEX-QEL4-2126-SM-447AE 11.0
GTEX-ZF3C-2326-SM-5S2MZ 11.0
GTEX-12KS4-0126-SM-5Q5A5 10.9
GTEX-R55D-0826-SM-48FEA 10.9
GTEX-WFON-1826-SM-3GILG 10.8
GTEX-Y111-2026-SM-4SOJA 10.8
GTEX-11P7K-0726-SM-5EGKX 10.7
GTEX-12WSM-1726-SM-5BC6J 10.7
GTEX-Y114-2026-SM-4TT7L 10.7
GTEX-Y5V6-2126-SM-4WWFX 10.7
GTEX-13OW5-2226-SM-5L3HC 10.6
GTEX-ZTX8-1226-SM-4YCE9 10.6
GTEX-ZVTK-0326-SM-51MRR 10.6
GTEX-1117F-2826-SM-5GZXL 10.4
GTEX-117XS-1926-SM-5GICO 10.4
GTEX-ZAB4-2526-SM-5HL8M 10.4
GTEX-11DXZ-1926-SM-5GZZL 10.3
GTEX-144GM-0926-SM-5O994 10.3
GTEX-ZUA1-1526-SM-59HLS 10.3
GTEX-UTHO-1026-SM-3GAF7 10.2
GTEX-13CF2-2026-SM-5K7VI 10.1
GTEX-13FTW-1426-SM-5LZWZ 10.1
GTEX-WOFL-0826-SM-3MJG1 10.1
GTEX-11TT1-2126-SM-5GU5Y 10.0
GTEX-WY7C-2726-SM-3NB3P 9.9
GTEX-ZTTD-1026-SM-51MRD 9.9
GTEX-11PRG-0826-SM-5EQ6A 9.8
GTEX-13O61-1826-SM-5KM4I 9.7
GTEX-R55F-1726-SM-2TF4R 9.6
GTEX-YB5E-1726-SM-5IFJ3 9.5
GTEX-11TUW-1826-SM-5BC5D 9.3
GTEX-YB5K-1626-SM-5IFIN 9.3
GTEX-11O72-2126-SM-5N9FO 9.2
GTEX-TKQ1-0226-SM-33HB5 9.2
GTEX-XQ8I-2426-SM-4WAXY 9.2
GTEX-ZVT4-1026-SM-57WC4 9.1
GTEX-145MO-0826-SM-5NQBL 8.8
GTEX-PSDG-1626-SM-48TCQ 8.7
GTEX-13OW8-0226-SM-5K7UP 8.6
GTEX-YJ8O-2226-SM-5IFHW 8.5
GTEX-14ABY-2126-SM-5QGQZ 8.3
GTEX-Y9LG-1426-SM-5IFJZ 8.3
GTEX-14E6E-1326-SM-5S2NR 8.0
GTEX-11DZ1-0326-SM-5N9BN 7.9
GTEX-11WQK-2426-SM-5GU5C 7.9
GTEX-12WSN-1326-SM-5GCNT 7.8
GTEX-YEC3-1026-SM-5IFI5 7.8
GTEX-117YX-1426-SM-5H12H 7.5
GTEX-13PVQ-1026-SM-5KM3M 7.5
GTEX-11ZTT-2326-SM-5EQLG 7.3
GTEX-QEG5-0726-SM-4R1JQ 7.2
GTEX-RUSQ-2026-SM-4GIAK 7.2
GTEX-111YS-1926-SM-5GICC 7.0
GTEX-ZQUD-1926-SM-51MSA 6.3
GTEX-ZQG8-0726-SM-5P9H9 6.1
GTEX-ZZ64-1226-SM-5E43R 6.0
GTEX-ZT9W-2026-SM-51MRA 5.8
GTEX-REY6-2426-SM-48FF5 5.5
GTEX-145ME-1526-SM-5Q5F2 4.7
GTEX-13CF3-2126-SM-5IFJP 4.6
GTEX-ZDYS-1126-SM-5K7UB 4.2
GTEX-ZLFU-2126-SM-4WWEV 4.2
GTEX-U8XE-0826-SM-4E3J1 3.7
GTEX-11P82-1326-SM-5HL62 3.4
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

13.8

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 13.8
FF:10080-102A8 77 years, female 13.8

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.