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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:72.1TPM
GTEx:37.4RPKM
FANTOM5:147.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody CAB003841

 

Glandular cells

Low  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

72.1

overview Male, age 65
Sample 1
TPM: 65.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 67.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 71.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 84.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

37.4

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 37.4
Samples: 88

Max RPKM: 57
Min RPKM: 18.3
Std RPKM: 7
Median RPKM: 38.6
GTEX-1192X-2526-SM-59868 57.0
GTEX-ZQUD-0926-SM-57WE3 49.1
GTEX-YEC4-1726-SM-4W21E 48.2
GTEX-XBED-1426-SM-4AT4G 48.1
GTEX-13OVI-1926-SM-5IJCG 47.4
GTEX-133LE-1426-SM-5IFH1 47.4
GTEX-ZTSS-0926-SM-59865 47.1
GTEX-Y9LG-1626-SM-5IFHM 46.4
GTEX-13O21-1026-SM-5IJDU 46.1
GTEX-ZTX8-0526-SM-59HLD 45.8
GTEX-14DAR-1426-SM-5RQIR 45.7
GTEX-Y114-1426-SM-4TT6W 44.6
GTEX-YB5E-1526-SM-5IFIE 44.1
GTEX-WQUQ-2426-SM-4MVNW 44.1
GTEX-XUZC-1426-SM-4BRV3 43.8
GTEX-1122O-1326-SM-5H11F 43.0
GTEX-XAJ8-0526-SM-47JYK 42.6
GTEX-1399S-2026-SM-5KM4B 42.6
GTEX-11I78-1126-SM-5A5K5 42.5
GTEX-111YS-1426-SM-5GID8 42.5
GTEX-YF7O-1826-SM-5IFIU 42.4
GTEX-131XF-1326-SM-5GCMQ 42.4
GTEX-ZLV1-1126-SM-4WWBW 42.4
GTEX-ZPCL-1726-SM-57WEO 42.1
GTEX-ZZ64-0526-SM-5GZXM 42.0
GTEX-ZVZP-1826-SM-5GZXB 41.5
GTEX-11DXX-1626-SM-5H11H 41.5
GTEX-12WSK-1526-SM-5CVNO 41.4
GTEX-ZTPG-2626-SM-57WFX 41.4
GTEX-ZF2S-1726-SM-57WFT 40.8
GTEX-13PL7-2626-SM-5IFH4 40.4
GTEX-11P7K-1626-SM-5GU63 40.0
GTEX-131XG-1726-SM-5LZUR 39.8
GTEX-13D11-0726-SM-5LZZB 39.8
GTEX-117YX-0326-SM-5GICL 39.5
GTEX-ZLFU-1526-SM-4WWBT 39.3
GTEX-WFG8-1626-SM-4LVMB 39.1
GTEX-ZYFG-2026-SM-5E43Y 39.1
GTEX-139T6-1026-SM-5IJGC 39.0
GTEX-13113-1226-SM-5EGHT 39.0
GTEX-WFG7-1726-SM-4LVME 39.0
GTEX-XXEK-1026-SM-4BRUW 38.9
GTEX-13FTW-2026-SM-5IJE2 38.8
GTEX-13QBU-1926-SM-5IJEW 38.6
GTEX-ZA64-1226-SM-5HL7B 38.6
GTEX-145ME-0926-SM-5O9AR 38.4
GTEX-13CF3-1226-SM-5LZXN 37.9
GTEX-XMK1-1826-SM-4B66F 37.9
GTEX-ZC5H-2326-SM-4WAYT 37.7
GTEX-13111-1426-SM-5DUW3 37.7
GTEX-111CU-1326-SM-5NQ8L 37.5
GTEX-11EQ9-1326-SM-5985X 37.3
GTEX-ZPIC-2326-SM-57WDW 37.2
GTEX-ZVT2-2126-SM-5NQ93 36.8
GTEX-145LT-1026-SM-5LU9O 36.8
GTEX-13RTK-0826-SM-5Q5C6 36.5
GTEX-ZXES-1526-SM-5NQ95 36.4
GTEX-ZYWO-1526-SM-5SIAL 35.6
GTEX-X5EB-1626-SM-4E3IV 34.7
GTEX-ZVP2-1726-SM-5GU5P 34.4
GTEX-1399U-2126-SM-5IFEZ 34.3
GTEX-WH7G-1626-SM-4LVMY 33.7
GTEX-ZQG8-2526-SM-57WEQ 33.7
GTEX-XGQ4-1326-SM-4GIDU 33.5
GTEX-13FH7-1226-SM-5IJFK 33.3
GTEX-12BJ1-1926-SM-5HL9Z 33.1
GTEX-1399R-2026-SM-5K7WN 32.1
GTEX-11DXZ-1326-SM-5H11X 31.4
GTEX-14E6E-1626-SM-5RQI7 30.9
GTEX-148VJ-2226-SM-5NQ9M 30.8
GTEX-11XUK-1426-SM-5EQMG 30.2
GTEX-ZP4G-1626-SM-57WGD 30.2
GTEX-WFJO-0926-SM-4LVM2 29.6
GTEX-Y3IK-1726-SM-4YCCR 29.5
GTEX-13O61-1326-SM-5KM31 28.8
GTEX-X15G-1426-SM-4PQZK 28.3
GTEX-139YR-2226-SM-5IFFW 27.9
GTEX-Z9EW-0926-SM-5CVMM 27.8
GTEX-WEY5-1526-SM-4LMJF 27.1
GTEX-WRHK-1026-SM-4MVOD 26.5
GTEX-ZEX8-1826-SM-57WBH 26.3
GTEX-VUSG-1726-SM-4KKZL 26.1
GTEX-UPK5-2026-SM-4JBIM 25.9
GTEX-11NSD-1726-SM-5N9C3 25.5
GTEX-Y5LM-1626-SM-4VDTB 25.4
GTEX-VJYA-0926-SM-4KL1N 24.7
GTEX-11P82-0826-SM-5P9GU 24.5
GTEX-11VI4-1626-SM-5EQKO 18.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

147.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 147.5
FF:10024-101D6 15,40,85 years, mixed 147.5

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