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Gene name

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In atlas

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ARHGAP4
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

ARHGAP4

Gene description

Rho GTPase activating protein 4

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

12
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enhanced (spleen)
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in bone marrow and lymphoid tissues as well as in immune cells in several tissues.

DATA RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 2 antibodies.
HPA001012 , HPA001083
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical
Cerebral cortexHippocampusCaudateCerebellumThyroid glandParathyroid glandAdrenal glandAppendixBone marrowLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleNasopharynxBronchusLungLiverGallbladderPancreasOral mucosaSalivary glandEsophagusStomachDuodenumSmall intestineColonRectumKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastVaginaCervix, uterineEndometriumFallopian tubeOvaryPlacentaAdipose tissueSoft tissueSkinNotdetectedLowMediumHighSCORE

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (spleen)
Cerebral cortexThyroid glandParathyroid glandAdrenal glandAppendixBone marrowLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleLungLiverGallbladderPancreasSalivary glandEsophagusStomachDuodenumSmall intestineColonRectumKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastCervix, uterineEndometriumFallopian tubeOvaryPlacentaAdipose tissueSkin020406080100TPM
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
HypothalamusPituitary glandCerebral cortexHippocampusCaudateCerebellumThyroid glandAdrenal glandSpleenHeart muscleSkeletal muscleLungLiverPancreasSalivary glandEsophagusStomachSmall intestineColonKidneyUrinary bladderTestisProstateBreastVaginaCervix, uterineEndometriumFallopian tubeOvaryAdipose tissueSkin020406080100120RPKM
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
Pituitary glandBrainHippocampusCaudateCerebellumThyroid glandAppendixLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleLungLiverGallbladderPancreasSalivary glandEsophagusSmall intestineColonKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastVaginaCervix, uterineEndometriumOvaryPlacentaAdipose tissueRetina020406080100120Tags Per Million

GENE INFORMATION

Gene name

ARHGAP4 (HGNC Symbol)

Synonyms

C1, KIAA0131, p115, RhoGAP4, SrGAP4

Description

Rho GTPase activating protein 4 (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the rhoGAP family of proteins which play a role in the regulation of small GTP-binding proteins belonging to the RAS superfamily. The protein encoded by the orthologous gene in rat is localized to the Golgi complex and can redistribute to microtubules. The rat protein stimulates the activity of some Rho GTPases in vitro. Genomic deletions of this gene and a neighboring gene have been found in patients with nephrogenic diabetes insipidus. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2009]

Chromosome

X

Cytoband

q28

Chromosome location (bp)

153907367 - 153934999

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000089820 (version 83.38)

Entrez gene

393

UniProt

P98171 (UniProt - Evidence at protein level)

neXtProt

NX_P98171

Antibodypedia

ARHGAP4 antibodies

PROTEIN BROWSER

«
ARHGAP4-001
ARHGAP4-003
ARHGAP4-004
ARHGAP4-005
ARHGAP4-009
ARHGAP4-010
ARHGAP4-011
ARHGAP4-015
ARHGAP4-017
ARHGAP4-019
ARHGAP4-020
ARHGAP4-024
»

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

ARHGAP4-001
ENSP00000359045
ENST00000370028
P98171 [Direct mapping]
Rho GTPase-activating protein 4
Show all
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005070 [SH3/SH2 adaptor activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005874 [microtubule]
GO:0005925 [focal adhesion]
GO:0007010 [cytoskeleton organization]
GO:0007165 [signal transduction]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007266 [Rho protein signal transduction]
GO:0007399 [nervous system development]
GO:0009967 [positive regulation of signal transduction]
GO:0010764 [negative regulation of fibroblast migration]
GO:0030336 [negative regulation of cell migration]
GO:0030426 [growth cone]
GO:0030517 [negative regulation of axon extension]
GO:0043065 [positive regulation of apoptotic process]
GO:0043547 [positive regulation of GTPase activity]
GO:0048011 [neurotrophin TRK receptor signaling pathway]
GO:0048365 [Rac GTPase binding]
GO:0051056 [regulation of small GTPase mediated signal transduction]
GO:0097190 [apoptotic signaling pathway]
Show all
986 aa
109.4 kDa
No 0
ARHGAP4-003
ENSP00000203786
ENST00000350060
P98171 [Direct mapping]
Rho GTPase-activating protein 4
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005070 [SH3/SH2 adaptor activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005925 [focal adhesion]
GO:0007010 [cytoskeleton organization]
GO:0007165 [signal transduction]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007266 [Rho protein signal transduction]
GO:0009967 [positive regulation of signal transduction]
GO:0030336 [negative regulation of cell migration]
GO:0043065 [positive regulation of apoptotic process]
GO:0043547 [positive regulation of GTPase activity]
GO:0048011 [neurotrophin TRK receptor signaling pathway]
GO:0048365 [Rac GTPase binding]
GO:0051056 [regulation of small GTPase mediated signal transduction]
GO:0097190 [apoptotic signaling pathway]
Show all
946 aa
105 kDa
No 0
ARHGAP4-004
ENSP00000473936
ENST00000488269
S4R352 [Direct mapping]
Rho GTPase-activating protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0030336 [negative regulation of cell migration]
GO:0048365 [Rac GTPase binding]
Show all
278 aa
31.6 kDa
No 0
ARHGAP4-005
ENSP00000398019
ENST00000422918
H7C120 [Direct mapping]
Rho GTPase-activating protein 4
Show all
   Phobius predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0030336 [negative regulation of cell migration]
GO:0048365 [Rac GTPase binding]
Show all
214 aa
24.1 kDa
No 0
ARHGAP4-009
ENSP00000412437
ENST00000454164
H7C3K8 [Direct mapping]
Rho GTPase-activating protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007165 [signal transduction]
GO:0030336 [negative regulation of cell migration]
GO:0048365 [Rac GTPase binding]
Show all
249 aa
26.8 kDa
No 0
ARHGAP4-010
ENSP00000408656
ENST00000442172
H7C2Z8 [Direct mapping]
Rho GTPase-activating protein 4
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007165 [signal transduction]
GO:0030336 [negative regulation of cell migration]
GO:0048365 [Rac GTPase binding]
Show all
294 aa
32.5 kDa
No 0
ARHGAP4-011
ENSP00000359033
ENST00000370016
E7EQN5 [Direct mapping]
Rho GTPase-activating protein 4
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005925 [focal adhesion]
GO:0007165 [signal transduction]
GO:0030336 [negative regulation of cell migration]
GO:0048365 [Rac GTPase binding]
Show all
925 aa
102.6 kDa
No 0
ARHGAP4-015
ENSP00000473840
ENST00000461052
S4R314 [Direct mapping]
Rho GTPase-activating protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0030336 [negative regulation of cell migration]
GO:0048365 [Rac GTPase binding]
Show all
317 aa
35.9 kDa
No 0
ARHGAP4-017
ENSP00000398259
ENST00000442262
C9J5M2 [Direct mapping]
Rho GTPase-activating protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0030336 [negative regulation of cell migration]
GO:0048365 [Rac GTPase binding]
Show all
177 aa
20.6 kDa
No 0
ARHGAP4-019
ENSP00000413782
ENST00000422091
C9JLA8 [Direct mapping]
Rho GTPase-activating protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0030336 [negative regulation of cell migration]
GO:0048365 [Rac GTPase binding]
Show all
174 aa
20.2 kDa
No 0
ARHGAP4-020
ENSP00000411712
ENST00000418750
H7C3G3 [Direct mapping]
Rho GTPase-activating protein 4
Show all
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0030336 [negative regulation of cell migration]
GO:0048365 [Rac GTPase binding]
Show all
196 aa
21.5 kDa
No 0
ARHGAP4-024
ENSP00000377322
ENST00000393721
E9PCM6 [Direct mapping]
Rho GTPase-activating protein 4
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005925 [focal adhesion]
GO:0007165 [signal transduction]
GO:0030336 [negative regulation of cell migration]
GO:0048365 [Rac GTPase binding]
Show all
768 aa
85.4 kDa
No 0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.