Tissue expression of EFNB1 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	12.9	TPM
GTEx:	20.4	RPKM
FANTOM5:	31.7	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody CAB031489
Squamous epithelial cells	High

ESOPHAGUS - HPA RNA-seq

Average TPM	12.9

Female, age 70

Sample 1
TPM: 13.0

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 11.9

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 13.9

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	20.4

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 20.4

Samples: 286

Max RPKM: 82.7
Min RPKM: 6.9
Std RPKM: 9.5
Median RPKM: 18.5

GTEX-145MF-1426-SM-5O9B6

82.7

GTEX-13FLV-1126-SM-5J2NO

71.6

GTEX-11GSP-1826-SM-5N9DQ

57.7

GTEX-T5JW-1326-SM-4DM5G

56.3

GTEX-WOFM-0626-SM-4OOS3

49.1

GTEX-13O1R-1326-SM-5IJF5

48.3

GTEX-NPJ8-1926-SM-3MJGB

47.8

GTEX-XLM4-2326-SM-4TT2D

46.9

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	31.7

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 31.7

FF:10015-101C6

68,74,75 years, mixed

31.7