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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:386.9TPM
GTEx:54.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Low
 

Antibody staining

Antibody HPA001527

 

Antibody HPA005692

 

Antibody CAB009538

 

Endothelial cells

Low   Not detected   Not detected  

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Medium   Not detected   Not detected  

Neuropil

Low   Not detected   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

386.9

N/A Male, age 5
Sample 1
TPM: 213.1
overview Female, age 40
Sample 2
TPM: 438.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 509.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

54.8

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 60.5
Samples: 114

Max RPKM: 493.1
Min RPKM: 11.7
Std RPKM: 63.1
Median RPKM: 34.7
GTEX-13G51-3026-SM-5IJB8 493.1
GTEX-11GS4-3126-SM-5A5LH 225.9
GTEX-12ZZY-3026-SM-5GCOU 214.3
GTEX-1192X-3126-SM-5N9BY 189.9
GTEX-N7MT-1126-SM-5SI7V 187.0
GTEX-UTHO-3026-SM-3GAFB 184.9
GTEX-13OW8-2826-SM-5L3GC 167.2
GTEX-1313W-3126-SM-5LZUI 165.2
GTEX-11ONC-2926-SM-5P9JM 157.1
GTEX-13PVQ-3026-SM-5SI93 136.7
GTEX-WL46-2926-SM-3LK82 133.4
GTEX-13FLW-1426-SM-5K7YE 133.3
GTEX-13FHO-3026-SM-5J1O9 131.2
GTEX-13FHP-3026-SM-5IJBS 128.9
GTEX-111FC-3126-SM-5GZZ2 124.4
GTEX-13NYB-3026-SM-5IJD7 122.6
GTEX-WHSE-3026-SM-3P5ZH 122.3
GTEX-XOTO-3026-SM-4B65M 119.8
GTEX-NPJ8-1526-SM-2D7VU 113.0
GTEX-QVUS-2826-SM-3GADB 104.2
GTEX-13OVJ-2826-SM-5L3GW 104.1
GTEX-ZAJG-3126-SM-5HL9J 91.6
GTEX-13OW6-3026-SM-5J2MI 88.8
GTEX-13OVH-3026-SM-5MR4N 88.1
GTEX-QDT8-2926-SM-32PKC 80.2
GTEX-YFC4-3126-SM-5PNV6 79.6
GTEX-12WSA-2926-SM-5EQ4D 77.2
GTEX-T6MN-2626-SM-32PMQ 77.1
GTEX-XLM4-3026-SM-4AT6L 76.3
GTEX-X585-3026-SM-46MWF 73.0
GTEX-1445S-3026-SM-5O9BR 72.8
GTEX-T5JC-2426-SM-3NMDB 70.7
GTEX-ZZPT-3026-SM-5GZXH 63.5
GTEX-NPJ7-2726-SM-2I3FT 59.3
GTEX-11GSO-2926-SM-5HL73 59.0
GTEX-12WSD-3126-SM-5HL7P 54.7
GTEX-145MF-2726-SM-5O995 54.3
GTEX-11OC5-0726-SM-5P9JK 54.0
GTEX-11DXY-3226-SM-5GIDE 52.9
GTEX-117XS-3026-SM-5N9CA 52.6
GTEX-11GSP-3226-SM-5986O 52.1
GTEX-1399T-3026-SM-5KLZC 52.1
GTEX-Q2AG-2926-SM-2HMJ3 50.7
GTEX-1117F-3226-SM-5N9CT 46.2
GTEX-11NV4-2126-SM-5N9DS 45.3
GTEX-144FL-3026-SM-5O99C 44.9
GTEX-ZAK1-3026-SM-5S2MJ 44.8
GTEX-14BMV-3026-SM-5S2PQ 43.0
GTEX-QMR6-1426-SM-32PLA 42.6
GTEX-13SLX-3126-SM-5S2Q5 42.1
GTEX-ZYFD-3026-SM-5E44C 41.4
GTEX-WVLH-3026-SM-3MJG9 39.0
GTEX-13JVG-3126-SM-5L3FH 37.3
GTEX-11DXW-1126-SM-5H12Q 37.0
GTEX-QVJO-1426-SM-2S1QY 35.4
GTEX-147GR-3026-SM-5S2ML 35.0
GTEX-11ZUS-2926-SM-5FQSL 34.8
GTEX-145LS-3126-SM-5Q5BY 34.6
GTEX-13OW7-3026-SM-5L3GY 34.0
GTEX-PWO3-0926-SM-2I5EY 33.9
GTEX-13VXU-2926-SM-5LU5C 33.8
GTEX-X4XX-3026-SM-3NMB2 33.8
GTEX-13JUV-2926-SM-5LZX7 33.3
GTEX-11O72-2926-SM-5BC4V 33.0
GTEX-12ZZX-2926-SM-5GCOQ 32.6
GTEX-12WSH-3026-SM-5CVNI 32.4
GTEX-11OF3-2926-SM-5HL78 32.0
GTEX-12ZZZ-3026-SM-5BC67 32.0
GTEX-13NYS-3126-SM-5KLYV 32.0
GTEX-RNOR-2326-SM-2TF4I 32.0
GTEX-12WSC-3026-SM-5GCNF 31.5
GTEX-1128S-2726-SM-5H12C 30.6
GTEX-12126-1026-SM-5P9JJ 30.4
GTEX-11TTK-2926-SM-5PNYP 29.5
GTEX-13QIC-2926-SM-5J2NF 29.3
GTEX-Y111-2726-SM-4TT3N 29.3
GTEX-13O3O-3126-SM-5KM3H 27.5
GTEX-131YS-3126-SM-5KLYT 27.3
GTEX-PVOW-2526-SM-2XCF7 26.8
GTEX-ZUA1-3026-SM-59HJC 26.4
GTEX-WWYW-3126-SM-3NB39 25.5
GTEX-13IVO-2926-SM-5L3CZ 25.2
GTEX-14ASI-3026-SM-5S2PN 24.8
GTEX-13FXS-3126-SM-5J2NN 24.1
GTEX-Y8DK-0826-SM-4TT3T 23.8
GTEX-13NYC-2826-SM-5K7WR 23.7
GTEX-OXRN-2426-SM-2I5EQ 23.7
GTEX-11NUK-2926-SM-5A5MD 23.6
GTEX-145MH-3026-SM-5Q5DZ 23.5
GTEX-145MG-3026-SM-5RQJA 22.8
GTEX-13S7M-3126-SM-5RQJQ 22.7
GTEX-144GL-3026-SM-5Q5CW 22.7
GTEX-11WQK-3026-SM-5EQL6 22.6
GTEX-RU72-3026-SM-5SI7Y 21.9
GTEX-WZTO-2926-SM-3NM9I 20.9
GTEX-14A5I-2926-SM-5Q5CQ 20.8
GTEX-11EI6-3026-SM-5GZZO 20.1
GTEX-13X6J-3026-SM-5Q5CU 19.8
GTEX-12ZZW-2926-SM-5LZUP 19.2
GTEX-13X6K-2926-SM-5Q5D5 18.7
GTEX-ZVT3-3026-SM-5E43N 18.5
GTEX-YJ89-3026-SM-5IFJI 18.0
GTEX-139T8-1026-SM-5J2MC 17.7
GTEX-13O3Q-2926-SM-5KM45 16.6
GTEX-T2IS-3026-SM-32QPM 16.1
GTEX-ZE7O-3126-SM-5HL5X 15.8
GTEX-13PL6-3126-SM-5LUAR 15.7
GTEX-11EMC-3226-SM-5EGKW 15.2
GTEX-Z93S-2926-SM-57WB9 15.2
GTEX-132Q8-3026-SM-5PNVG 14.8
GTEX-11PRG-2926-SM-5987A 14.7
GTEX-R55F-1326-SM-5S2V4 14.0
GTEX-131XW-3126-SM-5LZUC 12.2
GTEX-TSE9-3026-SM-3DB76 11.7
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 48.9
Samples: 108

Max RPKM: 290.8
Min RPKM: 7.7
Std RPKM: 49.1
Median RPKM: 28.9
GTEX-XMD1-0011-R10A-SM-4AT4A 290.8
GTEX-13FLW-0011-R10b-SM-5LZZF 251.6
GTEX-12WSD-0011-R10b-SM-5GU79 216.8
GTEX-ZE7O-0011-R10a-SM-57WAZ 211.7
GTEX-WWYW-0011-R10A-SM-3NB35 152.4
GTEX-12WSA-0011-R10b-SM-5P9ET 122.2
GTEX-13CZV-0011-R10b-SM-5LZYD 115.2
GTEX-QVJO-0011-R10A-SM-2S1QJ 113.3
GTEX-13X6K-0011-R10a-SM-5P9JR 112.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 108.8
GTEX-ZDXO-0011-R10a-SM-4WWD8 104.8
GTEX-13OVL-0011-R10a-SM-5L3GS 103.9
GTEX-XLM4-0011-R10A-SM-4AT5P 95.8
GTEX-13N1W-0011-R10b-SM-5MR4H 93.5
GTEX-RVPU-0011-R10A-SM-2XCAH 93.4
GTEX-WVLH-0011-R10A-SM-3MJFM 87.1
GTEX-ZVZQ-0011-R10b-SM-51MRT 85.1
GTEX-S7SE-0011-R10A-SM-2XCDF 84.3
GTEX-QDT8-0011-R10A-SM-32PKG 82.3
GTEX-N7MT-0011-R10A-SM-2I3E1 81.2
GTEX-13S7M-0011-R10b-SM-5PNZB 76.6
GTEX-X585-0011-R10A-SM-46MUY 74.2
GTEX-13RTJ-0011-R10b-SM-5O9CW 74.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 71.1
GTEX-13G51-0011-R10b-SM-5LZYF 68.8
GTEX-YFC4-0011-R10a-SM-4SOK5 67.6
GTEX-145LU-0011-R10a-SM-5PNWJ 59.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 59.6
GTEX-QVUS-0011-R10A-SM-3GIK3 58.3
GTEX-T5JC-0011-R10A-SM-32PM2 56.7
GTEX-X4XX-0011-R10B-SM-46MWO 55.9
GTEX-131YS-0011-R10b-SM-5EQ5N 55.7
GTEX-12WSF-0011-R10a-SM-5LZVH 54.5
GTEX-145MH-0011-R10b-SM-5PNUK 54.5
GTEX-WZTO-0011-R10B-SM-4E3KB 50.0
GTEX-13X6I-0011-R10a-SM-5PNWI 46.7
GTEX-13JVG-0011-R10b-SM-5KM2P 45.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 44.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 43.0
GTEX-1445S-0011-R10a-SM-5PNWB 41.5
GTEX-14BIL-0011-R10a-SM-5SI75 41.1
GTEX-145MG-0011-R10a-SM-5PNWG 38.1
GTEX-131XH-0011-R10a-SM-5EGLJ 36.9
GTEX-13FTZ-0011-R10b-SM-5KLZS 36.1
GTEX-13QJC-0011-R10a-SM-5SI63 35.3
GTEX-13FHO-0011-R10b-SM-5J2MM 33.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 33.8
GTEX-P44H-0011-R10A-SM-2XCEK 33.4
GTEX-13O3O-0011-R10a-SM-5LUA9 33.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 32.6
GTEX-OXRN-0011-R10A-SM-2I5GC 32.3
GTEX-12WSC-0011-R10a-SM-5GU57 31.9
GTEX-T6MN-0011-R10A-SM-32QP7 30.2
GTEX-WL46-0011-R10A-SM-3MJFQ 29.0
GTEX-ZUA1-0011-R10a-SM-51MT6 28.8
GTEX-12WSH-0011-R10a-SM-5LZUS 27.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 27.4
GTEX-13OW6-0011-R10a-SM-5L3HE 27.2
GTEX-147GR-0011-R10b-SM-5S2UM 26.4
GTEX-13OW8-0011-R10a-SM-5L3H6 26.0
GTEX-11WQC-0011-R10a-SM-57WCT 25.5
GTEX-12WSM-0011-R10a-SM-5DUWV 24.6
GTEX-X4EP-0011-R10B-SM-4QASJ 24.6
GTEX-145LS-0011-R10a-SM-5PNUQ 24.2
GTEX-13QIC-0011-R10a-SM-5O9C7 24.0
GTEX-13JUV-0011-R10b-SM-5LZXR 23.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 22.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 22.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 22.4
GTEX-13NYB-0011-R10a-SM-5KM43 21.9
GTEX-13X6J-0011-R10b-SM-5PNWA 21.8
GTEX-NL3H-0011-R10A-SM-2I3E9 21.6
GTEX-11ZUS-0011-R10b-SM-5BC79 21.5
GTEX-13N2G-0011-R10a-SM-5MR34 21.4
GTEX-13OW7-0011-R10a-SM-5L3H3 21.4
GTEX-139TS-0011-R10a-SM-5K7TU 21.3
GTEX-147F4-0011-R10b-SM-5S2WC 20.8
GTEX-13NYS-0011-R10a-SM-5MR4S 20.7
GTEX-N7MS-0011-R10A-SM-2HMJK 20.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 20.6
GTEX-NL4W-0011-R10A-SM-2I3DY 20.2
GTEX-QMR6-0011-R10A-SM-32PKO 20.2
GTEX-1313W-0011-R10b-SM-5DUXA 20.0
GTEX-13SLW-0011-R10a-SM-5S2UI 19.9
GTEX-ZV68-0011-R10a-SM-51MT7 19.6
GTEX-14BIN-0011-R10a-SM-5S2UA 19.3
GTEX-13FXS-0011-R10a-SM-5J2MA 18.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 18.6
GTEX-13O3Q-0011-R10b-SM-5KM39 18.5
GTEX-ZF28-0011-R10a-SM-4WWEH 18.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 17.9
GTEX-ZXG5-0011-R10a-SM-57WDD 17.3
GTEX-ZVT3-0011-R10b-SM-57WB6 16.7
GTEX-X261-0011-R10B-SM-4E3JT 16.3
GTEX-14753-0011-R10b-SM-5S2WE 16.0
GTEX-13SLX-0011-R10a-SM-5P9HV 15.7
GTEX-Z93S-0011-R10a-SM-4RGNM 14.6
GTEX-13IVO-0011-R10a-SM-5LZY3 13.7
GTEX-1477Z-0011-R10b-SM-5S2RF 13.7
GTEX-12WSE-0011-R10b-SM-5P9JV 13.3
GTEX-12126-0011-R10b-SM-5BC6T 12.2
GTEX-YJ89-0011-R10a-SM-4SOK9 11.7
GTEX-131XW-0011-R10a-SM-5DUVA 11.4
GTEX-13NZA-0011-R10b-SM-5KM54 9.8
GTEX-11WQK-0011-R10a-SM-5BC6R 9.7
GTEX-11H98-0011-R10b-SM-5NQ98 8.8
GTEX-OXRO-0011-R10A-SM-2I5EH 8.0
GTEX-TSE9-0011-R10A-SM-3DB7O 7.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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