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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:5384.6TPM
GTEx:1151.1RPKM
FANTOM5:7912.9Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Medium
 

Antibody staining

Antibody HPA001527

 

Antibody HPA005692

 

Antibody CAB009538

 

Bile duct cells

Low   Not detected   Not detected  

Hepatocytes

Medium   Medium   Low  
     
     
     

LIVER - HPA RNA-seq

Average TPM

5384.6

N/A Female, age 60
Sample 1
TPM: 3224.6
overview Male, age 54
Sample 2
TPM: 4506.9
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 5893.7
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 5667.5
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 4546.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 8947.9
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 6248.1
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 3325.2
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 5034.1
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 6451.5
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

1151.1

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 1151.1
Samples: 119

Max RPKM: 3940.9
Min RPKM: 181.8
Std RPKM: 704.8
Median RPKM: 977.8
GTEX-ZF2S-3026-SM-4WWCH 3940.9
GTEX-11DXZ-0126-SM-5EGGY 3353.9
GTEX-13SLX-1226-SM-5S2Q6 3285.3
GTEX-PX3G-0826-SM-48TZS 2730.7
GTEX-1399R-1226-SM-5P9GF 2682.1
GTEX-QESD-2026-SM-447BI 2540.1
GTEX-13FLV-0326-SM-5N9DJ 2417.9
GTEX-XOTO-0826-SM-4B65O 2331.5
GTEX-ZYT6-0626-SM-5E45V 2313.2
GTEX-12WSD-1426-SM-5GCN9 2300.9
GTEX-1212Z-0226-SM-59HLF 2295.6
GTEX-1399T-0826-SM-5IFES 2272.9
GTEX-YB5E-0326-SM-5IFHU 2271.1
GTEX-145MF-0826-SM-5QGQA 2128.4
GTEX-R53T-0326-SM-48FEC 2044.5
GTEX-ZAB5-0426-SM-5CVMI 2030.6
GTEX-QV44-0326-SM-4R1KD 1982.3
GTEX-RTLS-1326-SM-46MUN 1913.8
GTEX-U3ZN-0226-SM-3DB8D 1877.1
GTEX-147JS-1126-SM-5RQIW 1823.4
GTEX-14753-1626-SM-5NQ9L 1756.5
GTEX-14AS3-0126-SM-5Q5F4 1623.3
GTEX-T6MN-1226-SM-3NMA5 1621.9
GTEX-ZZPU-0426-SM-5GZYH 1612.5
GTEX-14DAQ-1726-SM-5S2R2 1603.2
GTEX-11GSP-0626-SM-5986T 1585.4
GTEX-ZF29-2026-SM-4WWB7 1581.5
GTEX-11EQ9-0526-SM-5A5JZ 1546.6
GTEX-QEL4-1226-SM-447A4 1544.5
GTEX-13OW6-2626-SM-5IFF2 1468.1
GTEX-Y5LM-0426-SM-4VBRO 1443.5
GTEX-139TU-0826-SM-5IJFG 1368.5
GTEX-13113-1326-SM-5GCOI 1360.7
GTEX-P78B-1326-SM-3P611 1352.2
GTEX-WYVS-1926-SM-4PQZ2 1342.0
GTEX-Q734-0326-SM-48U15 1341.3
GTEX-13FTW-1126-SM-5J2NV 1311.5
GTEX-WZTO-0626-SM-4PQYY 1249.5
GTEX-11NV4-1326-SM-5HL6V 1234.4
GTEX-QEG4-1826-SM-4R1JN 1223.9
GTEX-13VXU-0926-SM-5IFFH 1217.4
GTEX-ZVT3-1626-SM-5GU66 1204.2
GTEX-11DXY-0526-SM-5EGGQ 1186.2
GTEX-12WSM-0726-SM-5GCOW 1177.0
GTEX-13112-1426-SM-5EGH8 1175.3
GTEX-Z9EW-0426-SM-5CVM9 1161.5
GTEX-12WSI-0226-SM-5GCNA 1143.8
GTEX-RN64-1826-SM-48FDV 1131.5
GTEX-147F4-1426-SM-5LUA8 1129.2
GTEX-11ZTS-1426-SM-5EQMM 1128.7
GTEX-144GM-1326-SM-5LU5E 1126.1
GTEX-Y5V5-0926-SM-4VBPZ 1100.7
GTEX-RM2N-1926-SM-48FCU 1071.6
GTEX-11NUK-1226-SM-5P9GM 1065.7
GTEX-X3Y1-2726-SM-4PQZH 1025.7
GTEX-131YS-1626-SM-5HL6C 1021.9
GTEX-ZPU1-0826-SM-57WG2 1015.4
GTEX-OOBJ-0826-SM-3NB2K 1006.2
GTEX-132NY-0926-SM-5P9G3 979.5
GTEX-14E1K-0326-SM-5S2PE 977.8
GTEX-11OF3-0726-SM-5BC4Z 975.3
GTEX-UPK5-1426-SM-4JBHH 968.4
GTEX-XBEC-1526-SM-4AT68 931.6
GTEX-RWSA-1426-SM-47JXA 907.4
GTEX-TKQ2-1726-SM-4DXUP 904.9
GTEX-13FTZ-0726-SM-5IFFY 897.5
GTEX-X4EP-1026-SM-4QAS5 887.7
GTEX-RNOR-1426-SM-48FDJ 887.5
GTEX-139TS-1426-SM-5IFJD 875.9
GTEX-ZTPG-1426-SM-51MT3 865.4
GTEX-13PVR-0126-SM-5S2PY 854.3
GTEX-11WQC-0726-SM-5EQMR 851.6
GTEX-YECK-1926-SM-4W21H 785.6
GTEX-13N11-0926-SM-5IJG2 778.9
GTEX-SJXC-1226-SM-4DM78 770.8
GTEX-13NYB-1026-SM-5IFH3 762.3
GTEX-ZVT4-0626-SM-5E45T 761.2
GTEX-WFON-1726-SM-4LVMQ 759.7
GTEX-UPIC-0926-SM-4IHLV 756.4
GTEX-ZVP2-0626-SM-51MSO 748.5
GTEX-13QJC-0726-SM-5RQJK 740.8
GTEX-145LU-1326-SM-5LU9N 727.9
GTEX-YEC4-0826-SM-5P9FV 725.0
GTEX-14C38-1526-SM-5RQJ7 709.3
GTEX-X261-1726-SM-4PQYT 708.7
GTEX-1497J-0726-SM-5Q5D1 696.4
GTEX-14A5I-1726-SM-5QGQ5 691.6
GTEX-VUSG-0126-SM-4KL1X 678.5
GTEX-Q2AG-1126-SM-48U1P 664.7
GTEX-11ZUS-2526-SM-59872 660.3
GTEX-12KS4-1326-SM-5LUB3 658.1
GTEX-S4Z8-0526-SM-4AD4T 650.7
GTEX-131XH-0626-SM-5LZWH 627.4
GTEX-12WSG-0626-SM-5FQTQ 620.9
GTEX-X4EO-1126-SM-4QARQ 617.6
GTEX-ZYY3-0626-SM-5NQ6W 592.6
GTEX-11ZVC-0726-SM-5FQT9 592.0
GTEX-RU72-1426-SM-46MUF 585.8
GTEX-ZAB4-0826-SM-5LU9D 556.0
GTEX-REY6-1226-SM-48FDR 536.6
GTEX-146FH-1526-SM-5NQBU 526.4
GTEX-X4XY-1626-SM-46MVN 462.5
GTEX-13O3O-1826-SM-5IFGW 455.4
GTEX-WQUQ-1926-SM-4OOSA 445.1
GTEX-13N2G-0926-SM-5IFGJ 430.6
GTEX-UTHO-2426-SM-4JBHD 422.0
GTEX-145MO-2326-SM-5NQ9K 420.3
GTEX-139YR-0226-SM-5IFEM 414.5
GTEX-13NZB-0626-SM-5IFH6 411.9
GTEX-12696-0826-SM-5EGGE 410.7
GTEX-12ZZZ-1326-SM-59HKW 409.8
GTEX-1269C-0626-SM-5FQSS 397.0
GTEX-YFC4-1526-SM-5IFJS 384.1
GTEX-12WSL-0226-SM-5CVMJ 366.7
GTEX-S33H-1626-SM-4AD68 316.5
GTEX-13NZ9-1326-SM-5MR3V 288.7
GTEX-131XE-0326-SM-5LZVO 264.2
GTEX-S32W-1926-SM-4AD63 249.7
GTEX-QDVN-0826-SM-48TZ2 181.8
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

7912.9

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 7912.9
FF:10018-101C9 64,69,70 years, mixed 7912.9

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The Human Protein Atlas project is funded
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