We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CPA1
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:0.5TPM
GTEx:7.7RPKM
FANTOM5:0.6Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA021836

 

Antibody HPA052215

 

Antibody CAB025197

 

Adipocytes

Not detected   Not detected   Not detected  

Glandular cells

Not detected   Not detected   Low  

Myoepithelial cells

Not detected   Not detected   Low  
     
     
     

BREAST - HPA RNA-seq

Average TPM

0.5

overview Female, age 52
Sample 1
TPM: 1.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 0.8
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 0.1
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 0.0
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

7.7

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 7.7
Samples: 214

Max RPKM: 326.6
Min RPKM: 0
Std RPKM: 27.7
Median RPKM: 2.2
GTEX-11O72-2126-SM-5N9FO 326.6
GTEX-13FTX-1126-SM-5N9EN 152.9
GTEX-ZYW4-0826-SM-5GIDG 145.2
GTEX-ZYFC-0826-SM-5E44K 79.1
GTEX-Y8LW-1626-SM-5IFHX 74.9
GTEX-12BJ1-1826-SM-5HL9N 59.1
GTEX-ZAB4-2526-SM-5HL8M 57.1
GTEX-ZXES-0826-SM-5E43C 38.7
GTEX-145ME-1526-SM-5Q5F2 29.0
GTEX-YFC4-1426-SM-5IFJG 23.1
GTEX-1399U-1826-SM-5PNZ1 20.9
GTEX-ZAJG-0626-SM-5HL8X 20.3
GTEX-S33H-0326-SM-4AD6N 18.1
GTEX-11WQC-1726-SM-5GU4W 15.4
GTEX-TKQ2-1826-SM-33HB2 15.4
GTEX-WFON-1826-SM-3GILG 14.5
GTEX-YJ8O-2226-SM-5IFHW 14.2
GTEX-XMK1-1126-SM-4IHJ8 11.4
GTEX-R53T-1526-SM-48FEK 10.8
GTEX-T2YK-2226-SM-32QPT 10.2
GTEX-YB5K-1626-SM-5IFIN 10.2
GTEX-12WSB-0626-SM-59HJO 9.8
GTEX-13CF3-2126-SM-5IFJP 9.1
GTEX-11P81-1926-SM-5BC53 9.0
GTEX-144GM-0926-SM-5O994 8.0
GTEX-Y9LG-1426-SM-5IFJZ 7.9
GTEX-1314G-1226-SM-5BC6D 7.8
GTEX-YB5E-1726-SM-5IFJ3 7.8
GTEX-QVJO-1826-SM-447C9 7.5
GTEX-YEC3-1026-SM-5IFI5 7.5
GTEX-11TUW-1826-SM-5BC5D 7.2
GTEX-UJHI-1426-SM-3DB9C 7.0
GTEX-139T6-1626-SM-5PNYZ 6.7
GTEX-QEL4-2126-SM-447AE 6.6
GTEX-12KS4-0126-SM-5Q5A5 6.4
GTEX-11GS4-2126-SM-5A5KR 6.3
GTEX-13113-1726-SM-5GCOO 6.2
GTEX-PSDG-1626-SM-48TCQ 6.2
GTEX-12WSM-1726-SM-5BC6J 6.1
GTEX-U8XE-0826-SM-4E3J1 6.1
GTEX-Y114-2026-SM-4TT7L 6.1
GTEX-11GSO-1926-SM-5A5K3 6.0
GTEX-11ONC-2126-SM-5HL6E 5.9
GTEX-XQ8I-2426-SM-4WAXY 5.6
GTEX-11EMC-2026-SM-5A5JV 5.5
GTEX-R55D-0826-SM-48FEA 5.4
GTEX-S4Q7-1126-SM-4AD6R 5.4
GTEX-XQ3S-1326-SM-4BOPQ 5.4
GTEX-11DXZ-1926-SM-5GZZL 5.3
GTEX-SE5C-2126-SM-4BRUJ 5.3
GTEX-Y5V6-2126-SM-4WWFX 5.3
GTEX-QMRM-1626-SM-4R1KV 5.2
GTEX-XMD2-0926-SM-4WWEF 5.2
GTEX-ZPIC-1126-SM-5BC7F 5.1
GTEX-ZYT6-0126-SM-5E45J 5.1
GTEX-XV7Q-2326-SM-4BRVZ 5.0
GTEX-ZUA1-1526-SM-59HLS 4.8
GTEX-ZZPU-0626-SM-5E43T 4.8
GTEX-12WSN-1326-SM-5GCNT 4.6
GTEX-13S86-1226-SM-5S2OA 4.6
GTEX-Y5V5-2126-SM-4WWFO 4.5
GTEX-12WSK-2226-SM-5GCO5 4.3
GTEX-Y111-2026-SM-4SOJA 4.3
GTEX-Y3I4-1526-SM-4TT7K 4.3
GTEX-ZLFU-2126-SM-4WWEV 4.2
GTEX-Q2AG-0326-SM-48U1O 4.1
GTEX-RUSQ-2026-SM-4GIAK 4.1
GTEX-TKQ1-0226-SM-33HB5 4.0
GTEX-S32W-2026-SM-4AD6E 3.9
GTEX-R3RS-0626-SM-48FE1 3.8
GTEX-S4P3-1326-SM-4AD6V 3.8
GTEX-SIU7-1626-SM-4BRUK 3.8
GTEX-REY6-2426-SM-48FF5 3.7
GTEX-XYKS-1326-SM-4BRUN 3.7
GTEX-11DXY-2326-SM-5GICW 3.6
GTEX-146FH-0826-SM-5SI8T 3.6
GTEX-XOT4-0726-SM-4GIAW 3.6
GTEX-XUZC-1626-SM-4BRVP 3.6
GTEX-Y3IK-2326-SM-4WWDT 3.6
GTEX-144GL-2026-SM-5LU3O 3.5
GTEX-S341-1526-SM-4AD6K 3.5
GTEX-117XS-1926-SM-5GICO 3.4
GTEX-S4UY-0726-SM-4AD6X 3.4
GTEX-ZLV1-1426-SM-4WWES 3.4
GTEX-117YX-1426-SM-5H12H 3.2
GTEX-WRHU-0326-SM-3MJFY 3.2
GTEX-ZTTD-1026-SM-51MRD 3.2
GTEX-QDT8-0626-SM-48TYW 3.0
GTEX-U3ZH-1426-SM-4DXSR 2.9
GTEX-13PVQ-1026-SM-5KM3M 2.8
GTEX-13QIC-2326-SM-5LU5N 2.8
GTEX-U3ZN-1926-SM-4DXSG 2.8
GTEX-1211K-1926-SM-5EQLB 2.7
GTEX-14AS3-1626-SM-5S2OY 2.7
GTEX-TML8-1226-SM-32QON 2.7
GTEX-UPK5-2326-SM-3P5Z8 2.7
GTEX-VUSG-2226-SM-4KKZO 2.7
GTEX-X4EP-2926-SM-3P5YQ 2.7
GTEX-ZZ64-1226-SM-5E43R 2.6
GTEX-1122O-1226-SM-5H113 2.5
GTEX-QEG5-0726-SM-4R1JQ 2.5
GTEX-WI4N-1426-SM-3LK7H 2.5
GTEX-XBED-1626-SM-47JYN 2.4
GTEX-14753-2426-SM-5LU8U 2.3
GTEX-RWS6-1926-SM-47JXY 2.3
GTEX-Y8E4-1626-SM-5S2MW 2.3
GTEX-11ZTT-2326-SM-5EQLG 2.2
GTEX-UTHO-1026-SM-3GAF7 2.2
GTEX-Y5LM-1726-SM-4VDSX 2.2
GTEX-ZQG8-0726-SM-5P9H9 2.2
GTEX-11DZ1-0326-SM-5N9BN 2.1
GTEX-T6MO-0326-SM-32QOK 2.1
GTEX-XUW1-2326-SM-4BOO5 2.1
GTEX-ZF2S-2026-SM-5E461 2.1
GTEX-T5JW-2026-SM-4DM63 2.0
GTEX-U412-1826-SM-4DXTJ 2.0
GTEX-XUJ4-1926-SM-4BOOV 2.0
GTEX-ZA64-1526-SM-5CVMD 2.0
GTEX-111YS-1926-SM-5GICC 1.9
GTEX-13W46-0826-SM-5LU3H 1.9
GTEX-145MN-1926-SM-5SIAI 1.9
GTEX-139TU-0626-SM-5KM3X 1.8
GTEX-13O3Q-2226-SM-5KM4O 1.8
GTEX-13D11-1026-SM-5IJFB 1.7
GTEX-13OW8-0226-SM-5K7UP 1.7
GTEX-WY7C-2726-SM-3NB3P 1.7
GTEX-ZVT4-1026-SM-57WC4 1.7
GTEX-XGQ4-0926-SM-4AT4U 1.6
GTEX-ZT9W-2026-SM-51MRA 1.6
GTEX-11ZUS-0826-SM-5FQUY 1.5
GTEX-13W3W-1226-SM-5LU4H 1.5
GTEX-T2IS-1526-SM-32QPR 1.5
GTEX-11LCK-2426-SM-5HL5F 1.4
GTEX-WOFL-0826-SM-3MJG1 1.4
GTEX-X261-0626-SM-3NMD9 1.4
GTEX-ZTX8-1226-SM-4YCE9 1.4
GTEX-132AR-0826-SM-5EGK6 1.3
GTEX-13O61-1826-SM-5KM4I 1.3
GTEX-11EQ9-1826-SM-5Q5AJ 1.2
GTEX-13OW5-2226-SM-5L3HC 1.2
GTEX-WYBS-0926-SM-3NM94 1.2
GTEX-WYJK-1326-SM-3NB2T 1.2
GTEX-X15G-1626-SM-3NMB3 1.2
GTEX-YFCO-1826-SM-4W1YH 1.2
GTEX-11DXW-0626-SM-5N9ER 1.1
GTEX-11P82-1326-SM-5HL62 1.1
GTEX-133LE-1726-SM-5K7VQ 1.1
GTEX-13PL6-2926-SM-5L3I2 1.1
GTEX-S7SE-0826-SM-4AT4D 1.1
GTEX-X4XY-0926-SM-4E3JD 1.1
GTEX-ZDTT-2126-SM-5S2OJ 1.1
GTEX-ZDYS-1126-SM-5K7UB 1.1
GTEX-ZV6S-1826-SM-5NQ8D 1.1
GTEX-132NY-0826-SM-5K7Y7 1.0
GTEX-13FTW-1426-SM-5LZWZ 1.0
GTEX-WYVS-1726-SM-3NMAY 1.0
GTEX-11I78-2226-SM-5PNYA 0.9
GTEX-11NSD-0926-SM-5N9DR 0.9
GTEX-11NV4-2026-SM-5N9DG 0.8
GTEX-11EM3-1326-SM-5N9C6 0.7
GTEX-13FHO-0826-SM-5L3E8 0.7
GTEX-145MO-0826-SM-5NQBL 0.7
GTEX-14E6E-1326-SM-5S2NR 0.7
GTEX-RU72-0626-SM-46MUI 0.7
GTEX-ZV7C-1826-SM-5NQ83 0.7
GTEX-ZVZQ-0826-SM-51MRF 0.7
GTEX-ZY6K-1626-SM-5GZWV 0.7
GTEX-13CF2-2026-SM-5K7VI 0.6
GTEX-VJWN-0726-SM-3GIJ8 0.6
GTEX-ZQUD-1926-SM-51MSA 0.6
GTEX-1192X-2326-SM-5987X 0.5
GTEX-11OF3-1926-SM-59889 0.5
GTEX-13N1W-0626-SM-5MR4U 0.5
GTEX-ZVT2-1826-SM-5NQ8W 0.5
GTEX-1117F-2826-SM-5GZXL 0.4
GTEX-11P7K-0726-SM-5EGKX 0.4
GTEX-W5X1-2326-SM-3GIL6 0.4
GTEX-ZF3C-2326-SM-5S2MZ 0.4
GTEX-11PRG-0826-SM-5EQ6A 0.3
GTEX-12ZZX-1126-SM-5EGKB 0.3
GTEX-131YS-0626-SM-5EGKL 0.3
GTEX-13FTY-2226-SM-5J1ND 0.3
GTEX-14ABY-2126-SM-5QGQZ 0.3
GTEX-WXYG-2226-SM-4E3IM 0.3
GTEX-ZDXO-0126-SM-5S2ND 0.3
GTEX-ZEX8-2226-SM-57WC6 0.3
GTEX-ZVE2-1226-SM-5NQ8R 0.3
GTEX-ZYWO-2326-SM-5GZY4 0.3
GTEX-11EI6-0626-SM-5985T 0.2
GTEX-1313W-0826-SM-5EQ4T 0.2
GTEX-131XW-0726-SM-5EGK3 0.2
GTEX-13N11-1726-SM-5J1OJ 0.2
GTEX-13NZ9-1026-SM-5MR5K 0.2
GTEX-13O3O-0826-SM-5K7WE 0.2
GTEX-ZC5H-2626-SM-5J2MG 0.2
GTEX-ZVTK-0326-SM-51MRR 0.2
GTEX-11WQK-2426-SM-5GU5C 0.1
GTEX-1269C-2426-SM-5FQSN 0.1
GTEX-132Q8-1426-SM-5EGK7 0.1
GTEX-13NZ8-0126-SM-5IJCT 0.1
GTEX-T5JC-2126-SM-32PMO 0.1
GTEX-T6MN-0726-SM-32PML 0.1
GTEX-TMMY-0726-SM-33HBE 0.1
GTEX-ZF29-1926-SM-5S2P1 0.1
GTEX-ZWKS-2826-SM-5NQ74 0.1
GTEX-11TT1-2126-SM-5GU5Y 0.0
GTEX-139T8-0826-SM-5L3DE 0.0
GTEX-13NZB-2126-SM-5MR4Y 0.0
GTEX-13O3P-0826-SM-5L3DH 0.0
GTEX-145LT-0726-SM-5S2VM 0.0
GTEX-147F4-2826-SM-5NQBN 0.0
GTEX-R55F-1726-SM-2TF4R 0.0
GTEX-XMD1-0826-SM-4AT52 0.0
GTEX-ZU9S-1926-SM-5NQBP 0.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

0.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 0.6
FF:10080-102A8 77 years, female 0.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.