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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:378.0TPM
GTEx:29.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glial cells:High
Neuronal cells:High
Neuropil:Not detected
 

Antibody staining

Antibody HPA051075

 

Antibody CAB005223

 

Antibody CAB075755

 

Antibody CAB075756

 

Endothelial cells

Medium   High   Medium   Low  

Glial cells

Medium   High   Low   Not detected  

Neuronal cells

High   High   High   High  

Neuropil

Low   Not detected   Not detected   Not detected  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

378.0

N/A Male, age 5
Sample 1
TPM: 387.7
overview Female, age 40
Sample 2
TPM: 404.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 342.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

29.7

GTEx sample id

RPKM

23.225.428.819.737.10510152025303540
 
23.225.428.819.737.10510152025303540

Brain - Cortex

Brain - Cortex
RPKM: 26.5
Samples: 114

Max RPKM: 42.5
Min RPKM: 19.7
Std RPKM: 4.5
Median RPKM: 25.4
GTEX-13OVJ-2826-SM-5L3GW 42.5
GTEX-NPJ8-1526-SM-2D7VU 40.2
GTEX-11OC5-0726-SM-5P9JK 38.3
GTEX-13NYC-2826-SM-5K7WR 38.1
GTEX-13NYS-3126-SM-5KLYV 37.8
GTEX-X585-3026-SM-46MWF 37.1
GTEX-UTHO-3026-SM-3GAFB 35.7
GTEX-13G51-3026-SM-5IJB8 35.0
GTEX-1192X-3126-SM-5N9BY 34.6
GTEX-N7MT-1126-SM-5SI7V 34.2
GTEX-13FHO-3026-SM-5J1O9 33.5
GTEX-144FL-3026-SM-5O99C 32.5
GTEX-13JVG-3126-SM-5L3FH 32.4
GTEX-132Q8-3026-SM-5PNVG 31.7
GTEX-13X6K-2926-SM-5Q5D5 31.3
GTEX-ZE7O-3126-SM-5HL5X 31.2
GTEX-139T8-1026-SM-5J2MC 31.0
GTEX-QVJO-1426-SM-2S1QY 30.7
GTEX-11WQK-3026-SM-5EQL6 30.3
GTEX-QVUS-2826-SM-3GADB 30.0
GTEX-QMR6-1426-SM-32PLA 29.8
GTEX-PWO3-0926-SM-2I5EY 29.7
GTEX-QDT8-2926-SM-32PKC 29.6
GTEX-WHSE-3026-SM-3P5ZH 29.5
GTEX-12ZZY-3026-SM-5GCOU 29.4
GTEX-13FHP-3026-SM-5IJBS 29.1
GTEX-11TTK-2926-SM-5PNYP 29.0
GTEX-R55F-1326-SM-5S2V4 28.9
GTEX-14A5I-2926-SM-5Q5CQ 28.8
GTEX-X4XX-3026-SM-3NMB2 28.7
GTEX-ZAJG-3126-SM-5HL9J 28.6
GTEX-RU72-3026-SM-5SI7Y 28.5
GTEX-NPJ7-2726-SM-2I3FT 28.2
GTEX-WZTO-2926-SM-3NM9I 28.2
GTEX-WWYW-3126-SM-3NB39 27.8
GTEX-XLM4-3026-SM-4AT6L 27.6
GTEX-YFC4-3126-SM-5PNV6 27.6
GTEX-11NUK-2926-SM-5A5MD 27.3
GTEX-13PVQ-3026-SM-5SI93 27.3
GTEX-13FLW-1426-SM-5K7YE 27.2
GTEX-11DXY-3226-SM-5GIDE 26.9
GTEX-12ZZW-2926-SM-5LZUP 26.8
GTEX-131YS-3126-SM-5KLYT 26.4
GTEX-13IVO-2926-SM-5L3CZ 26.4
GTEX-PVOW-2526-SM-2XCF7 26.3
GTEX-11GSP-3226-SM-5986O 26.2
GTEX-1399T-3026-SM-5KLZC 26.2
GTEX-13NYB-3026-SM-5IJD7 26.2
GTEX-ZAK1-3026-SM-5S2MJ 26.2
GTEX-1445S-3026-SM-5O9BR 26.1
GTEX-13FXS-3126-SM-5J2NN 26.0
GTEX-1128S-2726-SM-5H12C 25.9
GTEX-111FC-3126-SM-5GZZ2 25.8
GTEX-ZZPT-3026-SM-5GZXH 25.8
GTEX-11GSO-2926-SM-5HL73 25.7
GTEX-RNOR-2326-SM-2TF4I 25.7
GTEX-12WSD-3126-SM-5HL7P 25.4
GTEX-11EI6-3026-SM-5GZZO 25.3
GTEX-11O72-2926-SM-5BC4V 25.3
GTEX-Y8DK-0826-SM-4TT3T 25.3
GTEX-12ZZZ-3026-SM-5BC67 25.2
GTEX-145LS-3126-SM-5Q5BY 25.0
GTEX-OXRN-2426-SM-2I5EQ 25.0
GTEX-11OF3-2926-SM-5HL78 24.9
GTEX-12ZZX-2926-SM-5GCOQ 24.8
GTEX-14BMV-3026-SM-5S2PQ 24.8
GTEX-ZVT3-3026-SM-5E43N 24.7
GTEX-1117F-3226-SM-5N9CT 24.6
GTEX-13QIC-2926-SM-5J2NF 24.6
GTEX-11EMC-3226-SM-5EGKW 24.5
GTEX-11GS4-3126-SM-5A5LH 24.4
GTEX-12WSH-3026-SM-5CVNI 24.4
GTEX-145MG-3026-SM-5RQJA 24.2
GTEX-ZUA1-3026-SM-59HJC 24.2
GTEX-T2IS-3026-SM-32QPM 24.0
GTEX-12WSC-3026-SM-5GCNF 23.9
GTEX-11ONC-2926-SM-5P9JM 23.7
GTEX-13JUV-2926-SM-5LZX7 23.7
GTEX-14ASI-3026-SM-5S2PN 23.7
GTEX-13O3Q-2926-SM-5KM45 23.6
GTEX-147GR-3026-SM-5S2ML 23.6
GTEX-13OW6-3026-SM-5J2MI 23.5
GTEX-1313W-3126-SM-5LZUI 23.4
GTEX-13OW8-2826-SM-5L3GC 23.3
GTEX-11DXW-1126-SM-5H12Q 23.2
GTEX-Q2AG-2926-SM-2HMJ3 23.2
GTEX-13OVH-3026-SM-5MR4N 23.1
GTEX-145MH-3026-SM-5Q5DZ 23.1
GTEX-TSE9-3026-SM-3DB76 23.1
GTEX-11PRG-2926-SM-5987A 22.9
GTEX-13PL6-3126-SM-5LUAR 22.8
GTEX-13SLX-3126-SM-5S2Q5 22.8
GTEX-131XW-3126-SM-5LZUC 22.7
GTEX-144GL-3026-SM-5Q5CW 22.4
GTEX-YJ89-3026-SM-5IFJI 22.4
GTEX-13OW7-3026-SM-5L3GY 22.3
GTEX-13X6J-3026-SM-5Q5CU 22.3
GTEX-XOTO-3026-SM-4B65M 22.1
GTEX-117XS-3026-SM-5N9CA 22.0
GTEX-WVLH-3026-SM-3MJG9 22.0
GTEX-13O3O-3126-SM-5KM3H 21.9
GTEX-11NV4-2126-SM-5N9DS 21.8
GTEX-T5JC-2426-SM-3NMDB 21.6
GTEX-T6MN-2626-SM-32PMQ 21.4
GTEX-12WSA-2926-SM-5EQ4D 21.3
GTEX-ZYFD-3026-SM-5E44C 21.2
GTEX-11ZUS-2926-SM-5FQSL 21.1
GTEX-12126-1026-SM-5P9JJ 21.1
GTEX-13S7M-3126-SM-5RQJQ 21.1
GTEX-WL46-2926-SM-3LK82 21.1
GTEX-145MF-2726-SM-5O995 20.8
GTEX-Z93S-2926-SM-57WB9 20.5
GTEX-Y111-2726-SM-4TT3N 19.9
GTEX-13VXU-2926-SM-5LU5C 19.7
Show all
28.731.936.119.647.305101520253035404550556065
 
28.731.936.119.647.305101520253035404550556065

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 33.1
Samples: 108

Max RPKM: 69
Min RPKM: 19.6
Std RPKM: 7.1
Median RPKM: 31.9
GTEX-13N2G-0011-R10a-SM-5MR34 69.0
GTEX-X4EP-0011-R10B-SM-4QASJ 59.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 49.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 47.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 45.4
GTEX-12WSD-0011-R10b-SM-5GU79 45.3
GTEX-QVUS-0011-R10A-SM-3GIK3 45.1
GTEX-13NYS-0011-R10a-SM-5MR4S 44.9
GTEX-XMD1-0011-R10A-SM-4AT4A 42.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 42.0
GTEX-13QJC-0011-R10a-SM-5SI63 41.2
GTEX-WWYW-0011-R10A-SM-3NB35 41.0
GTEX-13JVG-0011-R10b-SM-5KM2P 39.1
GTEX-QDT8-0011-R10A-SM-32PKG 38.8
GTEX-P44H-0011-R10A-SM-2XCEK 38.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 38.2
GTEX-132Q8-0011-R10b-SM-5DUWZ 38.1
GTEX-13X6K-0011-R10a-SM-5P9JR 37.7
GTEX-X585-0011-R10A-SM-46MUY 37.7
GTEX-ZAB4-0011-R10a-SM-4SOKH 37.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 37.6
GTEX-11H98-0011-R10b-SM-5NQ98 37.2
GTEX-14BIL-0011-R10a-SM-5SI75 37.1
GTEX-13X6I-0011-R10a-SM-5PNWI 37.0
GTEX-139TS-0011-R10a-SM-5K7TU 36.8
GTEX-QMR6-0011-R10A-SM-32PKO 36.6
GTEX-11ZUS-0011-R10b-SM-5BC79 36.2
GTEX-X261-0011-R10B-SM-4E3JT 36.1
GTEX-NL4W-0011-R10A-SM-2I3DY 35.9
GTEX-ZF28-0011-R10a-SM-4WWEH 35.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 35.8
GTEX-13FHO-0011-R10b-SM-5J2MM 35.6
GTEX-147GR-0011-R10b-SM-5S2UM 35.1
GTEX-1445S-0011-R10a-SM-5PNWB 35.0
GTEX-XLM4-0011-R10A-SM-4AT5P 34.5
GTEX-YFC4-0011-R10a-SM-4SOK5 34.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 34.4
GTEX-13FLW-0011-R10b-SM-5LZZF 34.2
GTEX-145MG-0011-R10a-SM-5PNWG 34.2
GTEX-X4XX-0011-R10B-SM-46MWO 34.2
GTEX-T5JC-0011-R10A-SM-32PM2 34.0
GTEX-12WSF-0011-R10a-SM-5LZVH 33.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 33.6
GTEX-NL3H-0011-R10A-SM-2I3E9 33.6
GTEX-13CZV-0011-R10b-SM-5LZYD 33.4
GTEX-13O3Q-0011-R10b-SM-5KM39 33.4
GTEX-14BIN-0011-R10a-SM-5S2UA 33.1
GTEX-11WQK-0011-R10a-SM-5BC6R 32.9
GTEX-131XH-0011-R10a-SM-5EGLJ 32.7
GTEX-N7MT-0011-R10A-SM-2I3E1 32.6
GTEX-13JUV-0011-R10b-SM-5LZXR 32.4
GTEX-WZTO-0011-R10B-SM-4E3KB 32.1
GTEX-OXRN-0011-R10A-SM-2I5GC 32.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 32.0
GTEX-13QIC-0011-R10a-SM-5O9C7 31.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 31.6
GTEX-TSE9-0011-R10A-SM-3DB7O 31.5
GTEX-YJ89-0011-R10a-SM-4SOK9 31.5
GTEX-Z93S-0011-R10a-SM-4RGNM 31.5
GTEX-ZVT3-0011-R10b-SM-57WB6 31.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 31.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 30.9
GTEX-13S7M-0011-R10b-SM-5PNZB 30.9
GTEX-ZUA1-0011-R10a-SM-51MT6 30.9
GTEX-131YS-0011-R10b-SM-5EQ5N 30.8
GTEX-12WSH-0011-R10a-SM-5LZUS 30.7
GTEX-T6MN-0011-R10A-SM-32QP7 30.6
GTEX-12126-0011-R10b-SM-5BC6T 30.5
GTEX-13NYB-0011-R10a-SM-5KM43 30.5
GTEX-11WQC-0011-R10a-SM-57WCT 30.4
GTEX-WVLH-0011-R10A-SM-3MJFM 30.4
GTEX-S7SE-0011-R10A-SM-2XCDF 30.2
GTEX-12WSM-0011-R10a-SM-5DUWV 30.1
GTEX-145LS-0011-R10a-SM-5PNUQ 30.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 29.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 29.7
GTEX-13X6J-0011-R10b-SM-5PNWA 29.5
GTEX-147F4-0011-R10b-SM-5S2WC 29.4
GTEX-145MH-0011-R10b-SM-5PNUK 29.2
GTEX-13N1W-0011-R10b-SM-5MR4H 29.0
GTEX-13SLW-0011-R10a-SM-5S2UI 28.7
GTEX-1313W-0011-R10b-SM-5DUXA 28.6
GTEX-145LU-0011-R10a-SM-5PNWJ 28.6
GTEX-N7MS-0011-R10A-SM-2HMJK 28.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 28.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 28.3
GTEX-13OW8-0011-R10a-SM-5L3H6 28.0
GTEX-13OW6-0011-R10a-SM-5L3HE 27.9
GTEX-13O3O-0011-R10a-SM-5LUA9 27.8
GTEX-13OVL-0011-R10a-SM-5L3GS 27.4
GTEX-12WSC-0011-R10a-SM-5GU57 27.2
GTEX-12WSA-0011-R10b-SM-5P9ET 27.1
GTEX-ZXG5-0011-R10a-SM-57WDD 26.6
GTEX-13G51-0011-R10b-SM-5LZYF 26.4
GTEX-13SLX-0011-R10a-SM-5P9HV 26.2
GTEX-1477Z-0011-R10b-SM-5S2RF 26.2
GTEX-12WSE-0011-R10b-SM-5P9JV 25.8
GTEX-RVPU-0011-R10A-SM-2XCAH 25.8
GTEX-13FXS-0011-R10a-SM-5J2MA 25.4
GTEX-ZV68-0011-R10a-SM-51MT7 25.1
GTEX-WL46-0011-R10A-SM-3MJFQ 24.8
GTEX-13OW7-0011-R10a-SM-5L3H3 24.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 24.5
GTEX-OXRO-0011-R10A-SM-2I5EH 23.9
GTEX-13IVO-0011-R10a-SM-5LZY3 21.7
GTEX-14753-0011-R10b-SM-5S2WE 21.7
GTEX-13NZA-0011-R10b-SM-5KM54 20.9
GTEX-131XW-0011-R10a-SM-5DUVA 19.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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