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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:34.2RPKM
FANTOM5:18.0Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:High
 

Antibody staining

Antibody HPA051075

 

Antibody CAB005223

 

Antibody CAB075755

 

Antibody CAB075756

 

Glial cells

Not detected   High   Low   Not detected  

Neuronal cells

High   High   High   Medium  
       
       
       

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

34.2

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 34.2
Samples: 94

Max RPKM: 51.5
Min RPKM: 11.9
Std RPKM: 8.8
Median RPKM: 35.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 51.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50.6
GTEX-QVUS-0011-R1A-SM-3GAD2 49.7
GTEX-X585-0011-R1B-SM-46MVE 49.1
GTEX-UTHO-0011-R1A-SM-3GIJO 49.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 48.4
GTEX-QMR6-0011-R1A-SM-32PKW 47.8
GTEX-QVJO-0011-R1A-SM-2S1QI 47.5
GTEX-13OW5-0011-R1b-SM-5L3GE 47.1
GTEX-13NYS-0011-R1b-SM-5MR55 46.8
GTEX-ZAB4-0011-R1a-SM-4RGNO 45.0
GTEX-131XH-0011-R1a-SM-5DUWA 44.9
GTEX-13N1W-0011-R1b-SM-5MR4T 44.0
GTEX-13G51-0011-R1a-SM-5LZYR 43.6
GTEX-12WSH-0011-R1a-SM-5GU5V 43.5
GTEX-WWYW-0011-R1A-SM-3TW8G 43.0
GTEX-T6MN-0011-R1A-SM-32QOY 41.3
GTEX-13QJC-0011-R1b-SM-5S2UU 40.7
GTEX-PVOW-0011-R1A-SM-32PL6 40.5
GTEX-PWO3-0011-R1A-SM-2I5EW 40.3
GTEX-QDT8-0011-R1A-SM-32PKS 40.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40.1
GTEX-T5JC-0011-R1A-SM-32PM6 39.9
GTEX-145LS-0011-R1b-SM-5PNUP 39.7
GTEX-N7MT-0011-R1a-SM-5SI7S 39.3
GTEX-13N2G-0011-R1b-SM-5MR3G 39.3
GTEX-144GL-0011-R1a-SM-5PNZ5 39.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 39.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 38.9
GTEX-11ZTS-0011-R1a-SM-5BC71 38.6
GTEX-13FHO-0011-R1b-SM-5KLZG 38.4
GTEX-1313W-0011-R1b-SM-5EQ4A 38.4
GTEX-13JUV-0011-R1a-SM-5LZY4 38.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 38.1
GTEX-X4XX-0011-R1B-SM-3P622 38.0
GTEX-13JVG-0011-R1a-SM-5KM32 37.9
GTEX-NPJ8-0011-R1a-SM-33HCB 37.9
GTEX-ZUA1-0011-R1a-SM-4YCE2 37.7
GTEX-N7MS-0011-R1a-SM-2HMJG 37.2
GTEX-13X6I-0011-R1b-SM-5PNZC 37.2
GTEX-13O3O-0011-R1b-SM-5KM2K 37.0
GTEX-XMD1-0011-R1A-SM-4AT4C 36.9
GTEX-11UD1-0011-R1b-SM-5BC7D 36.7
GTEX-NPJ7-0011-R1a-SM-3GACT 36.4
GTEX-13FXS-0011-R1a-SM-5K7U6 36.2
GTEX-13FLW-0011-R1b-SM-5LZX2 35.8
GTEX-P44H-0011-R1A-SM-3NM8J 35.6
GTEX-R55E-0011-R1A-SM-2TC6N 35.3
GTEX-11GSO-0011-R1b-SM-57WD3 35.2
GTEX-YFC4-0011-R1a-SM-4V6EH 34.4
GTEX-131YS-0011-R1a-SM-5DUXC 34.3
GTEX-13OVL-0011-R1a-SM-5L3H5 33.7
GTEX-XOTO-0011-R1B-SM-4B65C 33.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 33.3
GTEX-12WSF-0011-R1a-SM-5DUVI 33.2
GTEX-14ASI-0011-R1b-SM-5S2TY 33.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 32.8
GTEX-TSE9-0011-R1A-SM-3DB7E 32.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 32.0
GTEX-139TT-0011-R1a-SM-5LZVD 31.9
GTEX-13NYB-0011-R1b-SM-5KM4F 31.8
GTEX-13S7M-0011-R1b-SM-5PNZE 30.7
GTEX-S7SE-0011-R1A-SM-2XCDE 30.6
GTEX-WL46-0011-R1A-SM-3LK6M 30.5
GTEX-145MH-0011-R1b-SM-5PNWY 30.4
GTEX-12WSB-0011-R1b-SM-5P9EY 30.3
GTEX-12WSD-0011-R1b-SM-5LZVY 30.2
GTEX-RNOR-0011-R1A-SM-5SI8F 30.2
GTEX-132Q8-0011-R1a-SM-5EGLK 29.7
GTEX-12WSE-0011-R1b-SM-5GU4V 29.6
GTEX-1212Z-0011-R1b-SM-5BC72 29.2
GTEX-145LU-0011-R1a-SM-5Q5CE 29.1
GTEX-1399T-0011-R1b-SM-5DUWN 28.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 27.1
GTEX-13OW7-0011-R1b-SM-5L3HF 25.7
GTEX-12WSM-0011-R1a-SM-5LZW6 25.4
GTEX-11ONC-0011-R1a-SM-57WD4 24.9
GTEX-13NZA-0011-R1b-SM-5LUAF 24.8
GTEX-13OW8-0011-R1a-SM-5L3HI 24.2
GTEX-WVLH-0011-R1A-SM-4MVOK 24.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 23.9
GTEX-13112-0011-R1b-SM-5HL7K 23.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 22.7
GTEX-NL3H-0011-R1a-SM-48TDJ 22.5
GTEX-13PDP-0011-R1a-SM-5PNX5 21.9
GTEX-13SLW-0011-R1a-SM-5S2W7 21.6
GTEX-139T8-0011-R1a-SM-5HL75 20.8
GTEX-YJ89-0011-R1a-SM-4RGLS 19.5
GTEX-ZF28-0011-R1a-SM-4WWD1 18.6
GTEX-144GO-0011-R1a-SM-5PNWO 18.0
GTEX-13FHP-0011-R1b-SM-5K7XL 17.9
GTEX-13CF2-0011-R1a-SM-5LZY1 16.6
GTEX-ZE7O-0011-R1a-SM-57WDM 12.1
GTEX-13FTY-0011-R1a-SM-5LZXE 11.9
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

18.0

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 18.0
FF:10169-103B7 60 years, female 21.7
FF:10153-102I9 76 years, female 21.4
FF:10374-105G5 89 years, female 10.9

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