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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:290.8TPM
GTEx:43.8RPKM
FANTOM5:16.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA051075

 

Antibody CAB005223

 

Antibody CAB075755

 

Antibody CAB075756

 

Glandular cells

High   High   Medium   Medium  
       
       
       

SMALL INTESTINE - HPA RNA-seq

Average TPM

290.8

overview Male, age 65
Sample 1
TPM: 276.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 288.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 308.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 290.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

43.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 43.8
Samples: 88

Max RPKM: 83
Min RPKM: 19.1
Std RPKM: 11.2
Median RPKM: 43.3
GTEX-X15G-1426-SM-4PQZK 83.0
GTEX-UPK5-2026-SM-4JBIM 76.7
GTEX-11NSD-1726-SM-5N9C3 65.2
GTEX-11VI4-1626-SM-5EQKO 63.2
GTEX-11XUK-1426-SM-5EQMG 61.9
GTEX-11P82-0826-SM-5P9GU 60.7
GTEX-1399U-2126-SM-5IFEZ 60.0
GTEX-WRHK-1026-SM-4MVOD 59.3
GTEX-VUSG-1726-SM-4KKZL 59.0
GTEX-139YR-2226-SM-5IFFW 59.0
GTEX-Z9EW-0926-SM-5CVMM 57.2
GTEX-WFJO-0926-SM-4LVM2 56.8
GTEX-ZC5H-2326-SM-4WAYT 55.3
GTEX-ZP4G-1626-SM-57WGD 54.3
GTEX-WFG8-1626-SM-4LVMB 53.8
GTEX-13O61-1326-SM-5KM31 53.6
GTEX-1399R-2026-SM-5K7WN 53.2
GTEX-148VJ-2226-SM-5NQ9M 52.6
GTEX-14E6E-1626-SM-5RQI7 52.5
GTEX-XGQ4-1326-SM-4GIDU 52.0
GTEX-Y3IK-1726-SM-4YCCR 51.9
GTEX-131XG-1726-SM-5LZUR 51.4
GTEX-ZEX8-1826-SM-57WBH 51.2
GTEX-Y5LM-1626-SM-4VDTB 50.0
GTEX-1192X-2526-SM-59868 49.7
GTEX-13QBU-1926-SM-5IJEW 49.0
GTEX-13FH7-1226-SM-5IJFK 48.7
GTEX-13O21-1026-SM-5IJDU 48.1
GTEX-ZQUD-0926-SM-57WE3 47.9
GTEX-ZVP2-1726-SM-5GU5P 46.7
GTEX-117YX-0326-SM-5GICL 46.6
GTEX-WFG7-1726-SM-4LVME 46.6
GTEX-13111-1426-SM-5DUW3 46.3
GTEX-133LE-1426-SM-5IFH1 46.3
GTEX-WH7G-1626-SM-4LVMY 46.0
GTEX-12BJ1-1926-SM-5HL9Z 45.2
GTEX-ZQG8-2526-SM-57WEQ 44.9
GTEX-ZLV1-1126-SM-4WWBW 44.8
GTEX-ZVT2-2126-SM-5NQ93 44.5
GTEX-WEY5-1526-SM-4LMJF 44.3
GTEX-13FTW-2026-SM-5IJE2 44.2
GTEX-ZF2S-1726-SM-57WFT 43.8
GTEX-ZZ64-0526-SM-5GZXM 43.8
GTEX-145LT-1026-SM-5LU9O 43.7
GTEX-ZLFU-1526-SM-4WWBT 42.9
GTEX-13RTK-0826-SM-5Q5C6 42.2
GTEX-XAJ8-0526-SM-47JYK 42.2
GTEX-145ME-0926-SM-5O9AR 41.7
GTEX-ZYWO-1526-SM-5SIAL 41.6
GTEX-VJYA-0926-SM-4KL1N 41.5
GTEX-12WSK-1526-SM-5CVNO 40.7
GTEX-XXEK-1026-SM-4BRUW 40.1
GTEX-13113-1226-SM-5EGHT 39.9
GTEX-ZTPG-2626-SM-57WFX 39.9
GTEX-13PL7-2626-SM-5IFH4 39.9
GTEX-111CU-1326-SM-5NQ8L 39.5
GTEX-1399S-2026-SM-5KM4B 38.8
GTEX-Y114-1426-SM-4TT6W 38.6
GTEX-139T6-1026-SM-5IJGC 38.0
GTEX-11P7K-1626-SM-5GU63 38.0
GTEX-ZPIC-2326-SM-57WDW 37.4
GTEX-XMK1-1826-SM-4B66F 37.2
GTEX-131XF-1326-SM-5GCMQ 36.9
GTEX-13CF3-1226-SM-5LZXN 36.4
GTEX-11DXZ-1326-SM-5H11X 36.0
GTEX-ZTX8-0526-SM-59HLD 35.8
GTEX-WQUQ-2426-SM-4MVNW 35.8
GTEX-ZYFG-2026-SM-5E43Y 35.4
GTEX-14DAR-1426-SM-5RQIR 35.0
GTEX-11EQ9-1326-SM-5985X 34.9
GTEX-XUZC-1426-SM-4BRV3 34.7
GTEX-ZA64-1226-SM-5HL7B 34.5
GTEX-11DXX-1626-SM-5H11H 34.0
GTEX-XBED-1426-SM-4AT4G 33.9
GTEX-13D11-0726-SM-5LZZB 32.7
GTEX-ZXES-1526-SM-5NQ95 32.5
GTEX-11I78-1126-SM-5A5K5 32.0
GTEX-ZTSS-0926-SM-59865 31.1
GTEX-ZVZP-1826-SM-5GZXB 30.7
GTEX-YB5E-1526-SM-5IFIE 30.0
GTEX-YEC4-1726-SM-4W21E 29.7
GTEX-X5EB-1626-SM-4E3IV 29.1
GTEX-1122O-1326-SM-5H11F 28.2
GTEX-ZPCL-1726-SM-57WEO 27.1
GTEX-YF7O-1826-SM-5IFIU 26.8
GTEX-13OVI-1926-SM-5IJCG 25.9
GTEX-Y9LG-1626-SM-5IFHM 24.3
GTEX-111YS-1426-SM-5GID8 19.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

16.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 16.9
FF:10024-101D6 15,40,85 years, mixed 16.9

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