Tissue expression of PHGDH - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	53.8	TPM
GTEx:	12.7	RPKM
FANTOM5:	49.2	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA021241	Antibody HPA024031	Antibody CAB003681	Antibody CAB068216
Squamous epithelial cells	High	High	Not detected	High

ESOPHAGUS - HPA RNA-seq

Average TPM	53.8

Female, age 70

Sample 1
TPM: 60.4

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 47.0

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 54.1

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	12.7

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 12.7

Samples: 286

Max RPKM: 34
Min RPKM: 3.3
Std RPKM: 5.6
Median RPKM: 11.7

GTEX-ZTPG-1626-SM-5DUX2

34.0

GTEX-VJYA-0726-SM-4KL1T

32.5

GTEX-XYKS-1526-SM-4BRUP

30.2

GTEX-144GO-2726-SM-5O9A2

30.1

GTEX-QLQW-0526-SM-4R1KS

30.1

GTEX-RU72-0726-SM-46MUW

29.5

GTEX-UPK5-1226-SM-4IHL8

28.8

GTEX-11TT1-0526-SM-5P9JO

28.5

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	49.2

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 49.2

FF:10015-101C6

68,74,75 years, mixed

49.2