Tissue expression of PHGDH - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	6.8	TPM
GTEx:	3.3	RPKM
FANTOM5:	8.4	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Low

Antibody staining	Antibody HPA021241	Antibody HPA024031	Antibody CAB003681	Antibody CAB068216
Glandular cells	Medium	High	Not detected	Low

SMALL INTESTINE - HPA RNA-seq

Average TPM	6.8

Male, age 65

Sample 1
TPM: 4.1

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 6.4

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 9.4

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 7.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	3.3

GTEx sample id

RPKM

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 3.3

Samples: 88

Max RPKM: 21.1
Min RPKM: 0.2
Std RPKM: 3.2
Median RPKM: 2.4

GTEX-VJYA-0926-SM-4KL1N

21.1

GTEX-XMK1-1826-SM-4B66F

18.2

GTEX-ZF2S-1726-SM-57WFT

11.9

GTEX-13111-1426-SM-5DUW3

8.8

GTEX-117YX-0326-SM-5GICL

8.8

GTEX-WEY5-1526-SM-4LMJF

7.9

GTEX-ZQUD-0926-SM-57WE3

7.3

GTEX-X15G-1426-SM-4PQZK

7.2

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	8.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 8.4

FF:10024-101D6

15,40,85 years, mixed

8.4