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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:58.7TPM
GTEx:11.2RPKM
FANTOM5:47.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA001169

  

Antibody CAB011233

  

Adipocytes

 Low   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA001169

  

Antibody CAB011233

  

Adipocytes

 Low   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Medium   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

58.7
N/A Female, age 80
Sample 1
TPM: 56.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 38.7
N/A Female, age 57
Sample 3
TPM: 32.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 84.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 81.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.2

GTEx sample id

RPKM
9.611.112.65.317.00246810121416
 
9.611.112.65.317.00246810121416

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 11.1
Samples: 350

Max RPKM: 17.2
Min RPKM: 5.3
Std RPKM: 2.2
Median RPKM: 11.1
GTEX-146FQ-0226-SM-5NQAL 17.2
GTEX-Y5V6-2526-SM-5IFJV 17.2
GTEX-111CU-1826-SM-5GZYN 17.0
GTEX-12126-0426-SM-5Q5AP 16.6
GTEX-11DXX-2326-SM-5Q5A2 16.0
GTEX-11ONC-2526-SM-5986W 16.0
GTEX-Y5V5-2426-SM-5IFJA 16.0
GTEX-111VG-2326-SM-5N9BK 15.8
Show all
9.711.212.65.516.00246810121416182022
 
9.711.212.65.516.00246810121416182022

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 11.3
Samples: 227

Max RPKM: 22.7
Min RPKM: 5.5
Std RPKM: 2.3
Median RPKM: 11.2
GTEX-146FH-2026-SM-5SI9I 22.7
GTEX-131XG-0126-SM-5K7UJ 18.8
GTEX-13X6H-1726-SM-5Q5EH 18.8
GTEX-132AR-0526-SM-5J2MJ 18.6
GTEX-139D8-1626-SM-5IJFZ 17.2
GTEX-13S86-0926-SM-5SI6I 17.0
GTEX-12WSI-1526-SM-5GCNM 16.0
GTEX-13X6I-1526-SM-5SIAC 15.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

47.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 47.3
FF:10010-101C1 65,65,76 years, mixed 47.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.