Fields »
ABOUT
HELP
BLOG
PTGS1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.6TPM
GTEx:4.9RPKM
FANTOM5:16.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA002834

  

Antibody CAB020315

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA002834

  

Antibody CAB020315

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

11.6
N/A Female, age 80
Sample 1
TPM: 3.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 3.5
N/A Female, age 57
Sample 3
TPM: 3.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 23.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 24.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

4.9

GTEx sample id

RPKM
1.62.43.50.46.10123456789101112
 
1.62.43.50.46.10123456789101112

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 2.8
Samples: 350

Max RPKM: 12.2
Min RPKM: 0.4
Std RPKM: 1.7
Median RPKM: 2.4
GTEX-Q734-1826-SM-2I3EL 12.2
GTEX-13111-1726-SM-5EGJZ 11.9
GTEX-13YAN-0426-SM-5O9DR 10.6
GTEX-13FHO-0326-SM-5IJBH 9.2
GTEX-14C5O-0226-SM-5SI6O 9.1
GTEX-WL46-0326-SM-3LK6Y 8.5
GTEX-P4PQ-0226-SM-2S1NK 8.3
GTEX-P4QR-0426-SM-2S1NV 8.1
Show all
3.45.911.10.922.005101520253035404550
 
3.45.911.10.922.005101520253035404550

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 8.2
Samples: 227

Max RPKM: 54
Min RPKM: 0.9
Std RPKM: 6.9
Median RPKM: 5.9
GTEX-1128S-0926-SM-5GZZU 54.0
GTEX-ZYW4-2226-SM-5GZYG 35.5
GTEX-11WQK-1526-SM-5EGKN 32.5
GTEX-11NV4-1426-SM-5BC4W 27.9
GTEX-12WSC-1726-SM-5GCN3 26.4
GTEX-XLM4-1026-SM-4AT51 25.0
GTEX-Y8E4-1226-SM-5IFIM 23.6
GTEX-13G51-0526-SM-5IJCQ 23.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

16.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 16.7
FF:10010-101C1 65,65,76 years, mixed 16.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.