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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:18.0TPM
GTEx:12.3RPKM
FANTOM5:66.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA002834

 

Antibody CAB020315

 

Glandular cells

Medium   Medium  
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

18.0

overview Male, age 65
Sample 1
TPM: 7.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 15.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 25.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 23.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

12.3

GTEx sample id

RPKM

7.18.914.93.524.5051015202530354045
 
7.18.914.93.524.5051015202530354045

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 12.3
Samples: 88

Max RPKM: 46.1
Min RPKM: 3.5
Std RPKM: 8.7
Median RPKM: 8.9
GTEX-XMK1-1826-SM-4B66F 46.1
GTEX-ZQUD-0926-SM-57WE3 45.6
GTEX-145ME-0926-SM-5O9AR 45.1
GTEX-13111-1426-SM-5DUW3 37.1
GTEX-111CU-1326-SM-5NQ8L 33.1
GTEX-ZF2S-1726-SM-57WFT 24.5
GTEX-Y114-1426-SM-4TT6W 23.5
GTEX-12WSK-1526-SM-5CVNO 23.0
GTEX-ZQG8-2526-SM-57WEQ 21.5
GTEX-13OVI-1926-SM-5IJCG 20.7
GTEX-ZEX8-1826-SM-57WBH 20.5
GTEX-WFG7-1726-SM-4LVME 19.4
GTEX-148VJ-2226-SM-5NQ9M 18.5
GTEX-ZC5H-2326-SM-4WAYT 17.9
GTEX-WEY5-1526-SM-4LMJF 17.6
GTEX-117YX-0326-SM-5GICL 17.5
GTEX-ZPIC-2326-SM-57WDW 17.0
GTEX-XAJ8-0526-SM-47JYK 16.6
GTEX-ZTPG-2626-SM-57WFX 16.4
GTEX-VUSG-1726-SM-4KKZL 16.1
GTEX-1192X-2526-SM-59868 15.9
GTEX-13O21-1026-SM-5IJDU 15.9
GTEX-X15G-1426-SM-4PQZK 14.6
GTEX-ZYWO-1526-SM-5SIAL 14.2
GTEX-XXEK-1026-SM-4BRUW 14.1
GTEX-Z9EW-0926-SM-5CVMM 14.1
GTEX-13QBU-1926-SM-5IJEW 13.6
GTEX-WH7G-1626-SM-4LVMY 13.4
GTEX-Y3IK-1726-SM-4YCCR 13.0
GTEX-11NSD-1726-SM-5N9C3 12.4
GTEX-WFG8-1626-SM-4LVMB 12.0
GTEX-13RTK-0826-SM-5Q5C6 10.4
GTEX-VJYA-0926-SM-4KL1N 10.1
GTEX-ZP4G-1626-SM-57WGD 9.9
GTEX-XGQ4-1326-SM-4GIDU 9.9
GTEX-131XF-1326-SM-5GCMQ 9.8
GTEX-ZVP2-1726-SM-5GU5P 9.8
GTEX-ZVT2-2126-SM-5NQ93 9.7
GTEX-11VI4-1626-SM-5EQKO 9.7
GTEX-ZPCL-1726-SM-57WEO 9.2
GTEX-11DXZ-1326-SM-5H11X 9.1
GTEX-Y5LM-1626-SM-4VDTB 9.0
GTEX-WQUQ-2426-SM-4MVNW 9.0
GTEX-145LT-1026-SM-5LU9O 8.9
GTEX-XBED-1426-SM-4AT4G 8.8
GTEX-133LE-1426-SM-5IFH1 8.8
GTEX-X5EB-1626-SM-4E3IV 8.8
GTEX-131XG-1726-SM-5LZUR 8.7
GTEX-11XUK-1426-SM-5EQMG 8.7
GTEX-XUZC-1426-SM-4BRV3 8.6
GTEX-UPK5-2026-SM-4JBIM 8.6
GTEX-11EQ9-1326-SM-5985X 8.6
GTEX-13113-1226-SM-5EGHT 8.4
GTEX-139T6-1026-SM-5IJGC 8.2
GTEX-ZLFU-1526-SM-4WWBT 7.9
GTEX-11P82-0826-SM-5P9GU 7.8
GTEX-13FTW-2026-SM-5IJE2 7.7
GTEX-ZA64-1226-SM-5HL7B 7.7
GTEX-ZVZP-1826-SM-5GZXB 7.6
GTEX-139YR-2226-SM-5IFFW 7.5
GTEX-1399R-2026-SM-5K7WN 7.5
GTEX-12BJ1-1926-SM-5HL9Z 7.4
GTEX-13FH7-1226-SM-5IJFK 7.3
GTEX-13CF3-1226-SM-5LZXN 7.2
GTEX-1399U-2126-SM-5IFEZ 7.2
GTEX-WFJO-0926-SM-4LVM2 7.1
GTEX-13O61-1326-SM-5KM31 7.1
GTEX-ZXES-1526-SM-5NQ95 7.0
GTEX-Y9LG-1626-SM-5IFHM 7.0
GTEX-11DXX-1626-SM-5H11H 7.0
GTEX-ZTX8-0526-SM-59HLD 6.9
GTEX-WRHK-1026-SM-4MVOD 6.8
GTEX-14E6E-1626-SM-5RQI7 6.8
GTEX-YEC4-1726-SM-4W21E 6.5
GTEX-YB5E-1526-SM-5IFIE 6.5
GTEX-11P7K-1626-SM-5GU63 6.4
GTEX-11I78-1126-SM-5A5K5 6.3
GTEX-ZZ64-0526-SM-5GZXM 6.0
GTEX-ZYFG-2026-SM-5E43Y 5.7
GTEX-1399S-2026-SM-5KM4B 5.6
GTEX-1122O-1326-SM-5H11F 5.6
GTEX-ZLV1-1126-SM-4WWBW 5.5
GTEX-YF7O-1826-SM-5IFIU 5.5
GTEX-14DAR-1426-SM-5RQIR 5.3
GTEX-ZTSS-0926-SM-59865 5.2
GTEX-13D11-0726-SM-5LZZB 4.9
GTEX-13PL7-2626-SM-5IFH4 4.5
GTEX-111YS-1426-SM-5GID8 3.5
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

66.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 66.5
FF:10024-101D6 15,40,85 years, mixed 66.5

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