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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:33.2RPKM
FANTOM5:194.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA027559

 

Antibody HPA043084

 

Glial cells

Medium   Low  

Neuronal cells

Medium   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

33.2

GTEx sample id

RPKM

24.532.540.011.259.301020304050607080
 
24.532.540.011.259.301020304050607080

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 33.2
Samples: 117

Max RPKM: 80.3
Min RPKM: 11.2
Std RPKM: 11.9
Median RPKM: 32.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 80.3
GTEX-T2IS-0011-R5A-SM-32QP4 65.8
GTEX-132Q8-0011-R5a-SM-5IJDM 59.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 59.3
GTEX-13JUV-0011-R5a-SM-5LZY5 54.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 53.4
GTEX-131YS-0011-R5b-SM-5K7YB 52.2
GTEX-S7SE-0011-R5A-SM-2XCDA 51.7
GTEX-13G51-0011-R5a-SM-5L3EB 49.9
GTEX-PVOW-0011-R5A-SM-32PL7 49.9
GTEX-WWYW-0011-R5A-SM-3NB3E 49.1
GTEX-P44H-0011-R5A-SM-2XCEX 49.0
GTEX-XMD1-0011-R5A-SM-4AT47 48.0
GTEX-14BIM-0011-R5b-SM-5S2RM 46.3
GTEX-OHPN-0011-R5A-SM-2I5FF 45.9
GTEX-N7MT-0011-R5a-SM-2I3G6 45.7
GTEX-WL46-0011-R5A-SM-3LK6V 45.7
GTEX-13NYS-0011-R5a-SM-5MR4D 45.5
GTEX-T6MN-0011-R5A-SM-32QPD 44.6
GTEX-145MH-0011-R5a-SM-5P9JT 43.9
GTEX-NL4W-0011-R5a-SM-2I3GD 43.7
GTEX-11GSP-0011-R5a-SM-57WBE 43.6
GTEX-11OF3-0011-R5a-SM-57WB4 43.1
GTEX-WVLH-0011-R5A-SM-3MJFW 43.0
GTEX-13OW6-0011-R5a-SM-5O9BK 42.0
GTEX-T5JC-0011-R5A-SM-32PLK 41.9
GTEX-RU72-0011-R5A-SM-2TF6U 41.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 40.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 40.4
GTEX-1399T-0011-R5b-SM-5IJDK 40.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 39.6
GTEX-1313W-0011-R5b-SM-5L3EP 39.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 39.2
GTEX-WZTO-0011-R5B-SM-3NMC5 39.2
GTEX-13X6I-0011-R5a-SM-5PNWW 38.8
GTEX-13X6J-0011-R5b-SM-5PNWT 38.8
GTEX-QVJO-0011-R5A-SM-2S1QM 38.3
GTEX-UTHO-0011-R5A-SM-3GIJD 38.3
GTEX-12WSB-0011-R5b-SM-5GU67 38.1
GTEX-13VXU-0011-R5a-SM-5O9D7 37.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 36.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 36.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 36.1
GTEX-12WSF-0011-R5a-SM-5HL8K 35.7
GTEX-12WSC-0011-R5b-SM-5CVNS 35.3
GTEX-11H98-0011-R5b-SM-57WCF 35.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 34.8
GTEX-139TS-0011-R5b-SM-5J2MZ 34.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 34.3
GTEX-13SLX-0011-R5a-SM-5O9BV 34.2
GTEX-144GO-0011-R5a-SM-5PNUR 34.2
GTEX-14ABY-0011-R5b-SM-5SI7B 34.1
GTEX-ZE7O-0011-R5a-SM-57WBO 33.9
GTEX-13OW5-0011-R5b-SM-5L3FR 33.7
GTEX-13O3O-0011-R5b-SM-5KM44 33.1
GTEX-13OVL-0011-R5b-SM-5L3FU 32.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 32.6
GTEX-145LS-0011-R5a-SM-5SI65 32.6
GTEX-R55E-0011-R5A-SM-2TC5N 32.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 32.3
GTEX-N7MS-0011-R5a-SM-2HMK8 32.1
GTEX-RVPU-0011-R5A-SM-2XCAD 32.1
GTEX-13S7M-0011-R5b-SM-5P9HS 31.9
GTEX-NL3H-0011-R5a-SM-2I3GB 31.8
GTEX-13JVG-0011-R5a-SM-5MR4O 31.7
GTEX-13FXS-0011-R5b-SM-5LZYE 31.5
GTEX-13FLW-0011-R5a-SM-5LZX6 30.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 30.8
GTEX-12WSD-0011-R5b-SM-5CVNG 30.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 30.6
GTEX-13CZV-0011-R5a-SM-5K7XA 30.4
GTEX-X261-0011-R5A-SM-3NMB4 29.9
GTEX-13X6K-0011-R5b-SM-5PNUE 29.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 29.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 29.4
GTEX-13OW7-0011-R5b-SM-5O9DM 28.4
GTEX-RVPV-0011-R5A-SM-2TF69 27.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 27.0
GTEX-YFC4-0011-R5a-SM-4RGLR 26.8
GTEX-OXRN-0011-R5A-SM-2I5EF 26.7
GTEX-1445S-0011-R5a-SM-5PNUS 26.6
GTEX-Z93S-0011-R5b-SM-4RGNI 26.2
GTEX-ZXG5-0011-R5b-SM-57WBN 26.2
GTEX-13OVH-0011-R5b-SM-5KM4L 26.1
GTEX-ZV68-0011-R5a-SM-4YCDW 26.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 25.8
GTEX-11WQC-0011-R5a-SM-5BC74 24.7
GTEX-14BIN-0011-R5b-SM-5SI78 24.5
GTEX-11NV4-0011-R5a-SM-5NQ88 24.1
GTEX-TSE9-0011-R5A-SM-3DB7J 23.8
GTEX-NPJ7-0011-R5a-SM-33HBK 23.7
GTEX-X4XX-0011-R5A-SM-46MWN 23.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 22.9
GTEX-139TT-0011-R5b-SM-5K7W8 22.9
GTEX-ZUA1-0011-R5b-SM-51MTG 22.7
GTEX-S7PM-0011-R5A-SM-3NM8G 22.6
GTEX-13FLV-0011-R5a-SM-5LZWT 22.4
GTEX-QMR6-0011-R5A-SM-32PKT 22.4
GTEX-XOTO-0011-R5A-SM-4B657 20.9
GTEX-X585-0011-R5A-SM-46MVI 20.6
GTEX-12WSA-0011-R5b-SM-5GU5I 20.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 19.7
GTEX-12ZZX-0011-R5a-SM-5HL89 19.5
GTEX-1477Z-0011-R5b-SM-5PNUO 19.4
GTEX-ZVT3-0011-R5a-SM-51MSI 18.5
GTEX-11UD1-0011-R5b-SM-5P9FP 18.4
GTEX-YJ89-0011-R5a-SM-4V6GM 18.1
GTEX-13CIG-0011-R5b-SM-5L3F2 17.7
GTEX-13112-0011-R5b-SM-5DUV8 17.5
GTEX-13NYB-0011-R5a-SM-5MR45 17.0
GTEX-139T8-0011-R5b-SM-5J1MO 15.5
GTEX-144GL-0011-R5b-SM-5PNUJ 14.6
GTEX-145MG-0011-R5b-SM-5S2VU 12.9
GTEX-13CF2-0011-R5a-SM-5LZWS 12.7
GTEX-12WSH-0011-R5b-SM-5P9F3 12.4
GTEX-13FHP-0011-R5b-SM-5LZY2 12.4
GTEX-13NZA-0011-R5b-SM-5KM4K 11.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

194.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 194.3
FF:10164-103B2 76 years, female 292.3
FF:10379-105H1 89 years, female 96.2

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The Human Protein Atlas project is funded
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