Tissue expression of BRPF3 - Summary - The Human Protein Atlas

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BRPF3

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	BRPF3
Gene description	Bromodomain and PHD finger containing, 3
Protein class	Plasma proteins Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	7
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

General cytoplasmic and nuclear expression.

DATA RELIABILITY
Data reliability description	Antibody staining mainly not consistent with RNA expression data. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA022787
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	BRPF3 (HGNC Symbol)
Synonyms	KIAA1286
Description	Bromodomain and PHD finger containing, 3 (HGNC Symbol)
Entrez gene summary
Chromosome	6
Cytoband	p21.31
Chromosome location (bp)	36196744 - 36232790
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000096070 (version 83.38)
Entrez gene	27154
UniProt	Q9ULD4 (UniProt - Evidence at protein level)
neXtProt	NX_Q9ULD4
Antibodypedia	BRPF3 antibodies

PROTEIN BROWSER

BRPF3-001	BRPF3-003	BRPF3-006	BRPF3-007	BRPF3-008	BRPF3-011	BRPF3-012

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
BRPF3-001 ENSP00000350267 ENST00000357641	Q9ULD4 [Direct mapping] Bromodomain and PHD finger-containing protein 3 Show all	THUMBUP predicted membrane proteins Predicted intracellular proteins Plasma proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0002576 [platelet degranulation] GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0005829 [cytosol] GO:0007596 [blood coagulation] GO:0008270 [zinc ion binding] GO:0030168 [platelet activation] GO:0043966 [histone H3 acetylation] GO:0070776 [MOZ/MORF histone acetyltransferase complex] Show all	1205 aa 135.7 kDa	No	0
BRPF3-003 ENSP00000345419 ENST00000339717	Q9ULD4 [Direct mapping] Bromodomain and PHD finger-containing protein 3 Show all	THUMBUP predicted membrane proteins Predicted intracellular proteins Plasma proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0002576 [platelet degranulation] GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0005829 [cytosol] GO:0007596 [blood coagulation] GO:0008270 [zinc ion binding] GO:0030168 [platelet activation] GO:0043966 [histone H3 acetylation] GO:0070776 [MOZ/MORF histone acetyltransferase complex] Show all	935 aa 106.2 kDa	No	0
BRPF3-006 ENSP00000410669 ENST00000446974	A8WI62 [Direct mapping] Bromodomain and PHD finger-containing protein 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		95 aa 10.9 kDa	No	0
BRPF3-007 ENSP00000413655 ENST00000454960	A8WI61 [Direct mapping] Bromodomain and PHD finger-containing protein 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		129 aa 14.6 kDa	No	0
BRPF3-008 ENSP00000434501 ENST00000534694	Q9ULD4 [Direct mapping] Bromodomain and PHD finger-containing protein 3 Show all	THUMBUP predicted membrane proteins Predicted intracellular proteins Plasma proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0002576 [platelet degranulation] GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0005829 [cytosol] GO:0007596 [blood coagulation] GO:0008270 [zinc ion binding] GO:0030168 [platelet activation] GO:0043966 [histone H3 acetylation] GO:0070776 [MOZ/MORF histone acetyltransferase complex] Show all	871 aa 99.7 kDa	No	0
BRPF3-011 ENSP00000436504 ENST00000534400	E9PI60 [Direct mapping] Bromodomain and PHD finger-containing protein 3 Show all	THUMBUP predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0008270 [zinc ion binding] Show all	1106 aa 124.1 kDa	No	0
BRPF3-012 ENSP00000431894 ENST00000527657	E9PJ12 [Direct mapping] Bromodomain and PHD finger-containing protein 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		93 aa 10.9 kDa	No	0

Contact

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.