Tissue expression of SETD1A - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	8.6	TPM
GTEx:	7.4	RPKM
FANTOM5:	9.4	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:	Medium
Fibroblasts:	Low

Antibody staining	Antibody HPA020646	Antibody HPA058376
Chondrocytes	Medium	Low
Fibroblasts	Low	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Low
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA020646	Antibody HPA058376
Adipocytes	Medium	Low
Fibroblasts	Low	Low
Peripheral nerve	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	8.6

Female, age 80

Sample 1
TPM: 10.4

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 6.6

Female, age 57

Sample 3
TPM: 5.2

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 9.7

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 11.1

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	7.4

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 7.8

Samples: 350

Max RPKM: 13.7
Min RPKM: 4
Std RPKM: 1.5
Median RPKM: 7.8

GTEX-146FH-0226-SM-5QGPQ

13.7

GTEX-S7SF-1826-SM-3K2AD

13.7

GTEX-13O1R-0226-SM-5K7U5

13.2

GTEX-X4XY-0326-SM-46MVZ

13.1

GTEX-XBEC-0326-SM-4AT4M

12.5

GTEX-P4QT-0226-SM-3LK68

12.0

GTEX-REY6-0326-SM-2TF5A

12.0

GTEX-T6MN-0226-SM-32PMD

11.9

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 6.8

Samples: 227

Max RPKM: 11.3
Min RPKM: 3.9
Std RPKM: 1.3
Median RPKM: 6.7

GTEX-11WQK-1526-SM-5EGKN

11.3

GTEX-13IVO-2426-SM-5K7V9

11.3

GTEX-13S86-0926-SM-5SI6I

11.1

GTEX-ZAJG-1626-SM-5HL7I

10.5

GTEX-12WSA-1626-SM-5EGJV

10.2

GTEX-11EM3-1126-SM-5A5KM

9.7

GTEX-13S7M-0826-SM-5QGQX

9.7

GTEX-XUZC-1126-SM-4BOPZ

9.7

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	9.4

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 9.4

FF:10010-101C1

65,65,76 years, mixed

9.4