We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SETD1A
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:10.9TPM
GTEx:10.1RPKM
FANTOM5:17.2Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA020646

 

Antibody HPA058376

 

Cells in red pulp

Medium   Medium  

Cells in white pulp

Medium   Medium  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

10.9

overview Female, age 60
Sample 1
TPM: 12.5
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 13.1
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 10.1
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 12.8
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 6.1
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

10.1

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 10.1
Samples: 104

Max RPKM: 14.5
Min RPKM: 7.1
Std RPKM: 1.5
Median RPKM: 9.9
GTEX-XXEK-0126-SM-4BRVU 14.5
GTEX-131XE-1126-SM-5EGHW 14.3
GTEX-ZPU1-1026-SM-4YCEQ 13.9
GTEX-12WSG-0926-SM-5EGIH 13.5
GTEX-13S86-0126-SM-5S2PI 13.4
GTEX-OOBJ-0926-SM-48TDO 13.3
GTEX-ZLFU-0526-SM-4WWBN 12.8
GTEX-UPK5-1626-SM-4JBHI 12.5
GTEX-XQ8I-1726-SM-4BOQB 12.5
GTEX-X4LF-0226-SM-4QAS8 12.4
GTEX-XUJ4-0226-SM-4BOP8 12.4
GTEX-P4QS-0926-SM-48TBS 12.2
GTEX-1122O-0526-SM-5N9DM 11.9
GTEX-131XG-0426-SM-5IFGD 11.9
GTEX-OIZH-0926-SM-48TBR 11.7
GTEX-XAJ8-0126-SM-47JYG 11.5
GTEX-11DXX-0726-SM-5H12X 11.4
GTEX-ZVZP-0726-SM-59HKA 11.4
GTEX-X3Y1-0126-SM-4PQZA 11.3
GTEX-WHWD-0126-SM-4OORS 11.2
GTEX-12WSJ-0526-SM-5GCOZ 11.1
GTEX-Q2AH-0226-SM-48U1I 11.1
GTEX-13FH7-1326-SM-5IFG8 11.0
GTEX-1211K-0426-SM-5FQTP 10.9
GTEX-P4PP-0926-SM-48TBZ 10.9
GTEX-QV31-0126-SM-447BP 10.9
GTEX-W5WG-0626-SM-4SOID 10.9
GTEX-XGQ4-0126-SM-4AT4H 10.9
GTEX-11XUK-0426-SM-5EQML 10.8
GTEX-POMQ-0126-SM-48TD6 10.8
GTEX-12WSK-0126-SM-5GCO7 10.7
GTEX-1399R-0226-SM-5IJGG 10.7
GTEX-R55G-0226-SM-48FEI 10.7
GTEX-ZVP2-0526-SM-51MSC 10.7
GTEX-11EQ9-0426-SM-5A5JY 10.6
GTEX-13VXT-1326-SM-5LU3Y 10.6
GTEX-QLQW-0126-SM-447BK 10.6
GTEX-117YX-2126-SM-5GIEL 10.5
GTEX-PX3G-0926-SM-48U12 10.5
GTEX-S3XE-0626-SM-4AD6B 10.5
GTEX-12BJ1-0726-SM-5EGGF 10.4
GTEX-QDVN-0526-SM-48TZ4 10.4
GTEX-XMK1-0126-SM-4B65F 10.4
GTEX-XPVG-0626-SM-4B65B 10.4
GTEX-Z9EW-0726-SM-5HL9H 10.2
GTEX-11NSD-0426-SM-5N9CR 10.1
GTEX-RUSQ-0126-SM-47JWV 10.1
GTEX-U3ZH-0126-SM-4DXUK 10.1
GTEX-ZP4G-0326-SM-4YCEF 10.1
GTEX-QMRM-0226-SM-4R1K7 10.0
GTEX-13PVR-0326-SM-5RQJY 9.9
GTEX-146FR-1926-SM-5NQA6 9.9
GTEX-O5YT-0926-SM-48TDG 9.9
GTEX-Y114-0726-SM-4TT6U 9.9
GTEX-1399S-0226-SM-5IFFG 9.8
GTEX-PW2O-0126-SM-48TC8 9.8
GTEX-139T6-0226-SM-5IFGZ 9.7
GTEX-T5JW-0126-SM-4DM6K 9.7
GTEX-X585-1826-SM-4QAS3 9.7
GTEX-YB5E-0426-SM-5IFHR 9.7
GTEX-13PL7-1126-SM-5MR5O 9.6
GTEX-VJYA-0126-SM-4KL1P 9.6
GTEX-YFCO-0926-SM-5LUA5 9.6
GTEX-ZYWO-0226-SM-5GZX3 9.5
GTEX-146FQ-0626-SM-5LU9U 9.4
GTEX-U4B1-0526-SM-4DXTK 9.4
GTEX-WFON-0126-SM-4LVM9 9.4
GTEX-11VI4-0126-SM-5GU6Z 9.3
GTEX-13CF3-0226-SM-5J1NW 9.3
GTEX-147F3-0126-SM-5NQBJ 9.3
GTEX-144GN-2126-SM-5O99D 9.2
GTEX-YB5K-1926-SM-4VDT4 9.2
GTEX-13111-0126-SM-5EGHO 9.1
GTEX-132QS-0226-SM-5IFFZ 9.1
GTEX-QV44-0126-SM-4R1KH 9.1
GTEX-S4Z8-0226-SM-4AD5K 9.1
GTEX-ZAB5-0526-SM-5CVMU 9.1
GTEX-13N11-0126-SM-5KM2Z 8.9
GTEX-Y3I4-0126-SM-4TT26 8.9
GTEX-ZLWG-0426-SM-4WWFA 8.9
GTEX-Q734-0226-SM-48U1A 8.7
GTEX-UJHI-0126-SM-4IHLP 8.7
GTEX-11P7K-0426-SM-5BC5H 8.6
GTEX-139YR-0426-SM-5IFFV 8.6
GTEX-U3ZN-0126-SM-4DXUM 8.6
GTEX-PLZ6-0126-SM-48TC6 8.5
GTEX-XV7Q-0126-SM-4BRVK 8.5
GTEX-14DAR-0326-SM-5S2PS 8.4
GTEX-14E6E-1226-SM-5S2R5 8.4
GTEX-Y3IK-0126-SM-4WWE9 8.4
GTEX-ZV6S-0826-SM-5NQ6Z 8.4
GTEX-ZYFG-0726-SM-5GIDX 8.4
GTEX-12WSN-0126-SM-5DUX5 8.3
GTEX-145MN-0126-SM-5RQHY 8.3
GTEX-13X6H-0726-SM-5Q5BX 8.2
GTEX-Y8LW-0126-SM-4VBS1 8.2
GTEX-11LCK-0126-SM-5A5M5 8.1
GTEX-13U4I-1626-SM-5IFFR 8.1
GTEX-ZDTT-1026-SM-5KM19 8.1
GTEX-YEC4-0126-SM-4W21T 8.0
GTEX-11P81-1326-SM-5GU5S 7.8
GTEX-Y5LM-0326-SM-4VBRN 7.8
GTEX-QCQG-0226-SM-48U28 7.4
GTEX-ZZPU-0126-SM-5E446 7.1
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

17.2

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 17.2
FF:10025-101D7 39,50,70 years, male 17.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.