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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:98.8TPM
GTEx:53.0RPKM
FANTOM5:58.7Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Glandular cells:High
Myoepithelial cells:High
 

Antibody staining

Antibody HPA024344

 

Antibody CAB016113

 

Adipocytes

High   High  

Glandular cells

High   High  

Myoepithelial cells

High   High  
   
   
   

BREAST - HPA RNA-seq

Average TPM

98.8

overview Female, age 52
Sample 1
TPM: 82.0
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 84.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 105.2
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 123.7
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

53.0

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 53.0
Samples: 214

Max RPKM: 95.5
Min RPKM: 27.6
Std RPKM: 10.6
Median RPKM: 51.7
GTEX-QEG5-0726-SM-4R1JQ 95.5
GTEX-T2IS-1526-SM-32QPR 90.1
GTEX-13NZ9-1026-SM-5MR5K 80.4
GTEX-13PVQ-1026-SM-5KM3M 78.4
GTEX-R3RS-0626-SM-48FE1 78.2
GTEX-X261-0626-SM-3NMD9 75.9
GTEX-ZTX8-1226-SM-4YCE9 73.7
GTEX-11WQK-2426-SM-5GU5C 72.8
GTEX-ZY6K-1626-SM-5GZWV 72.8
GTEX-ZU9S-1926-SM-5NQBP 70.4
GTEX-11EMC-2026-SM-5A5JV 70.0
GTEX-13FTY-2226-SM-5J1ND 69.7
GTEX-U3ZH-1426-SM-4DXSR 69.6
GTEX-ZTTD-1026-SM-51MRD 69.5
GTEX-13PL6-2926-SM-5L3I2 69.1
GTEX-13NZ8-0126-SM-5IJCT 68.8
GTEX-QEL4-2126-SM-447AE 68.2
GTEX-13N1W-0626-SM-5MR4U 68.0
GTEX-133LE-1726-SM-5K7VQ 67.8
GTEX-VUSG-2226-SM-4KKZO 66.9
GTEX-X4EP-2926-SM-3P5YQ 66.4
GTEX-131XW-0726-SM-5EGK3 66.3
GTEX-11DZ1-0326-SM-5N9BN 66.0
GTEX-11EI6-0626-SM-5985T 65.8
GTEX-QDT8-0626-SM-48TYW 65.8
GTEX-UPK5-2326-SM-3P5Z8 65.8
GTEX-XMD2-0926-SM-4WWEF 65.3
GTEX-YFC4-1426-SM-5IFJG 65.2
GTEX-131YS-0626-SM-5EGKL 64.9
GTEX-13W3W-1226-SM-5LU4H 64.9
GTEX-ZEX8-2226-SM-57WC6 64.8
GTEX-ZAJG-0626-SM-5HL8X 64.6
GTEX-RU72-0626-SM-46MUI 64.2
GTEX-11GS4-2126-SM-5A5KR 63.6
GTEX-13OW5-2226-SM-5L3HC 63.4
GTEX-ZC5H-2626-SM-5J2MG 63.4
GTEX-11PRG-0826-SM-5EQ6A 63.0
GTEX-T6MN-0726-SM-32PML 62.6
GTEX-13NZB-2126-SM-5MR4Y 62.5
GTEX-T2YK-2226-SM-32QPT 62.5
GTEX-13CF2-2026-SM-5K7VI 62.2
GTEX-132Q8-1426-SM-5EGK7 62.1
GTEX-ZVTK-0326-SM-51MRR 62.0
GTEX-139TU-0626-SM-5KM3X 61.8
GTEX-13O3O-0826-SM-5K7WE 61.8
GTEX-RUSQ-2026-SM-4GIAK 61.8
GTEX-11TUW-1826-SM-5BC5D 61.1
GTEX-1192X-2326-SM-5987X 60.9
GTEX-11P82-1326-SM-5HL62 60.9
GTEX-WYVS-1726-SM-3NMAY 60.8
GTEX-147F4-2826-SM-5NQBN 60.7
GTEX-1117F-2826-SM-5GZXL 60.6
GTEX-11DXW-0626-SM-5N9ER 60.5
GTEX-132AR-0826-SM-5EGK6 60.4
GTEX-111YS-1926-SM-5GICC 60.2
GTEX-ZLFU-2126-SM-4WWEV 60.2
GTEX-1211K-1926-SM-5EQLB 60.0
GTEX-13FHO-0826-SM-5L3E8 60.0
GTEX-S341-1526-SM-4AD6K 59.7
GTEX-13O3Q-2226-SM-5KM4O 58.8
GTEX-1313W-0826-SM-5EQ4T 58.4
GTEX-WYBS-0926-SM-3NM94 58.4
GTEX-XMD1-0826-SM-4AT52 58.2
GTEX-Y3IK-2326-SM-4WWDT 58.2
GTEX-Y111-2026-SM-4SOJA 57.9
GTEX-13QIC-2326-SM-5LU5N 57.8
GTEX-12ZZX-1126-SM-5EGKB 57.5
GTEX-S32W-2026-SM-4AD6E 57.5
GTEX-WI4N-1426-SM-3LK7H 57.2
GTEX-ZVE2-1226-SM-5NQ8R 57.0
GTEX-12WSB-0626-SM-59HJO 56.6
GTEX-R55F-1726-SM-2TF4R 56.6
GTEX-WYJK-1326-SM-3NB2T 56.6
GTEX-ZLV1-1426-SM-4WWES 56.6
GTEX-11TT1-2126-SM-5GU5Y 55.9
GTEX-13D11-1026-SM-5IJFB 55.9
GTEX-XBED-1626-SM-47JYN 55.7
GTEX-S4P3-1326-SM-4AD6V 55.6
GTEX-1269C-2426-SM-5FQSN 55.4
GTEX-ZYWO-2326-SM-5GZY4 55.1
GTEX-Y8LW-1626-SM-5IFHX 54.9
GTEX-ZVT4-1026-SM-57WC4 54.9
GTEX-XOT4-0726-SM-4GIAW 54.7
GTEX-1399U-1826-SM-5PNZ1 54.6
GTEX-WRHU-0326-SM-3MJFY 54.6
GTEX-ZF2S-2026-SM-5E461 54.4
GTEX-11WQC-1726-SM-5GU4W 54.3
GTEX-13OW8-0226-SM-5K7UP 54.2
GTEX-T5JW-2026-SM-4DM63 54.2
GTEX-146FH-0826-SM-5SI8T 54.0
GTEX-Q2AG-0326-SM-48U1O 53.9
GTEX-WOFL-0826-SM-3MJG1 53.7
GTEX-13S86-1226-SM-5S2OA 53.6
GTEX-SIU7-1626-SM-4BRUK 53.4
GTEX-ZV7C-1826-SM-5NQ83 53.4
GTEX-139T8-0826-SM-5L3DE 53.3
GTEX-11P7K-0726-SM-5EGKX 53.2
GTEX-REY6-2426-SM-48FF5 53.0
GTEX-X4XY-0926-SM-4E3JD 53.0
GTEX-Y114-2026-SM-4TT7L 52.8
GTEX-ZF29-1926-SM-5S2P1 52.7
GTEX-RWS6-1926-SM-47JXY 52.6
GTEX-13O3P-0826-SM-5L3DH 52.5
GTEX-1122O-1226-SM-5H113 52.4
GTEX-U412-1826-SM-4DXTJ 52.3
GTEX-ZWKS-2826-SM-5NQ74 52.2
GTEX-11LCK-2426-SM-5HL5F 51.9
GTEX-QVJO-1826-SM-447C9 51.6
GTEX-11EM3-1326-SM-5N9C6 51.5
GTEX-S4UY-0726-SM-4AD6X 51.5
GTEX-Y5V5-2126-SM-4WWFO 51.4
GTEX-UJHI-1426-SM-3DB9C 50.9
GTEX-ZYFC-0826-SM-5E44K 50.6
GTEX-11GSO-1926-SM-5A5K3 50.4
GTEX-11DXY-2326-SM-5GICW 50.3
GTEX-ZA64-1526-SM-5CVMD 50.3
GTEX-ZUA1-1526-SM-59HLS 50.3
GTEX-U3ZN-1926-SM-4DXSG 50.2
GTEX-VJWN-0726-SM-3GIJ8 50.1
GTEX-ZZPU-0626-SM-5E43T 50.1
GTEX-11EQ9-1826-SM-5Q5AJ 49.9
GTEX-XV7Q-2326-SM-4BRVZ 49.9
GTEX-11NV4-2026-SM-5N9DG 49.8
GTEX-11O72-2126-SM-5N9FO 49.8
GTEX-Y5LM-1726-SM-4VDSX 49.6
GTEX-X15G-1626-SM-3NMB3 49.5
GTEX-12WSM-1726-SM-5BC6J 49.4
GTEX-145LT-0726-SM-5S2VM 49.4
GTEX-145MO-0826-SM-5NQBL 49.4
GTEX-ZVZQ-0826-SM-51MRF 49.3
GTEX-ZDXO-0126-SM-5S2ND 49.2
GTEX-XQ8I-2426-SM-4WAXY 49.1
GTEX-132NY-0826-SM-5K7Y7 48.8
GTEX-14753-2426-SM-5LU8U 48.8
GTEX-Y5V6-2126-SM-4WWFX 48.8
GTEX-S33H-0326-SM-4AD6N 48.7
GTEX-T5JC-2126-SM-32PMO 48.4
GTEX-TMMY-0726-SM-33HBE 48.2
GTEX-SE5C-2126-SM-4BRUJ 48.1
GTEX-Y3I4-1526-SM-4TT7K 48.1
GTEX-12WSN-1326-SM-5GCNT 48.0
GTEX-13113-1726-SM-5GCOO 47.9
GTEX-WXYG-2226-SM-4E3IM 47.8
GTEX-13O61-1826-SM-5KM4I 47.5
GTEX-11OF3-1926-SM-59889 47.3
GTEX-XQ3S-1326-SM-4BOPQ 47.3
GTEX-YJ8O-2226-SM-5IFHW 47.2
GTEX-TML8-1226-SM-32QON 47.0
GTEX-W5X1-2326-SM-3GIL6 47.0
GTEX-117XS-1926-SM-5GICO 46.9
GTEX-XUJ4-1926-SM-4BOOV 46.9
GTEX-11P81-1926-SM-5BC53 46.8
GTEX-U8XE-0826-SM-4E3J1 46.8
GTEX-S7SE-0826-SM-4AT4D 46.7
GTEX-ZVT2-1826-SM-5NQ8W 46.7
GTEX-12WSK-2226-SM-5GCO5 46.6
GTEX-12BJ1-1826-SM-5HL9N 46.5
GTEX-144GM-0926-SM-5O994 46.5
GTEX-13CF3-2126-SM-5IFJP 46.1
GTEX-144GL-2026-SM-5LU3O 45.8
GTEX-11ZUS-0826-SM-5FQUY 45.4
GTEX-ZYW4-0826-SM-5GIDG 45.4
GTEX-XUZC-1626-SM-4BRVP 45.3
GTEX-ZYT6-0126-SM-5E45J 45.2
GTEX-11I78-2226-SM-5PNYA 45.1
GTEX-ZF3C-2326-SM-5S2MZ 44.7
GTEX-ZPIC-1126-SM-5BC7F 44.6
GTEX-R55D-0826-SM-48FEA 44.4
GTEX-XUW1-2326-SM-4BOO5 44.4
GTEX-13N11-1726-SM-5J1OJ 44.3
GTEX-139T6-1626-SM-5PNYZ 43.8
GTEX-YFCO-1826-SM-4W1YH 43.8
GTEX-13W46-0826-SM-5LU3H 43.5
GTEX-Y8E4-1626-SM-5S2MW 43.4
GTEX-145MN-1926-SM-5SIAI 42.7
GTEX-S4Q7-1126-SM-4AD6R 42.7
GTEX-XYKS-1326-SM-4BRUN 42.5
GTEX-14E6E-1326-SM-5S2NR 42.4
GTEX-T6MO-0326-SM-32QOK 42.4
GTEX-ZV6S-1826-SM-5NQ8D 42.3
GTEX-TKQ2-1826-SM-33HB2 42.2
GTEX-YB5K-1626-SM-5IFIN 42.1
GTEX-XGQ4-0926-SM-4AT4U 42.0
GTEX-11NSD-0926-SM-5N9DR 41.8
GTEX-R53T-1526-SM-48FEK 41.8
GTEX-145ME-1526-SM-5Q5F2 41.5
GTEX-ZXES-0826-SM-5E43C 41.5
GTEX-117YX-1426-SM-5H12H 41.3
GTEX-14AS3-1626-SM-5S2OY 41.3
GTEX-1314G-1226-SM-5BC6D 41.0
GTEX-14ABY-2126-SM-5QGQZ 40.9
GTEX-ZDTT-2126-SM-5S2OJ 40.9
GTEX-Y9LG-1426-SM-5IFJZ 40.8
GTEX-13FTW-1426-SM-5LZWZ 40.6
GTEX-PSDG-1626-SM-48TCQ 39.9
GTEX-WY7C-2726-SM-3NB3P 39.9
GTEX-UTHO-1026-SM-3GAF7 39.8
GTEX-ZQUD-1926-SM-51MSA 39.8
GTEX-TKQ1-0226-SM-33HB5 39.3
GTEX-ZDYS-1126-SM-5K7UB 39.2
GTEX-ZT9W-2026-SM-51MRA 38.8
GTEX-11DXZ-1926-SM-5GZZL 37.9
GTEX-12KS4-0126-SM-5Q5A5 37.4
GTEX-ZZ64-1226-SM-5E43R 37.2
GTEX-ZAB4-2526-SM-5HL8M 36.9
GTEX-11ONC-2126-SM-5HL6E 36.8
GTEX-11ZTT-2326-SM-5EQLG 36.7
GTEX-YEC3-1026-SM-5IFI5 36.3
GTEX-YB5E-1726-SM-5IFJ3 35.3
GTEX-13FTX-1126-SM-5N9EN 35.1
GTEX-WFON-1826-SM-3GILG 34.6
GTEX-QMRM-1626-SM-4R1KV 33.3
GTEX-ZQG8-0726-SM-5P9H9 30.3
GTEX-XMK1-1126-SM-4IHJ8 27.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

58.7

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 58.7
FF:10080-102A8 77 years, female 58.7

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