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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:79.3TPM
GTEx:52.5RPKM
FANTOM5:102.8Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:High
 

Antibody staining

Antibody HPA024344

 

Antibody CAB016113

 

Squamous epithelial cells

High   High  
   
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

79.3

overview Female, age 70
Sample 1
TPM: 76.2
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 83.7
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 78.0
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

52.5

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 52.5
Samples: 286

Max RPKM: 101.4
Min RPKM: 25.6
Std RPKM: 11.3
Median RPKM: 51.1
GTEX-RUSQ-0826-SM-47JWW 101.4
GTEX-TMMY-1126-SM-4DXSX 94.2
GTEX-ZTX8-0226-SM-5E44D 91.5
GTEX-13X6H-1326-SM-5LU42 86.0
GTEX-13X6I-1026-SM-5LU4C 83.0
GTEX-11TT1-0526-SM-5P9JO 80.4
GTEX-133LE-0626-SM-5IFFJ 79.5
GTEX-146FQ-1026-SM-5LU8I 78.8
GTEX-Y111-1626-SM-57WCY 77.4
GTEX-ZDYS-0826-SM-4WWCR 76.5
GTEX-13FH7-0526-SM-5IJF8 75.7
GTEX-RU72-0726-SM-46MUW 75.3
GTEX-S32W-0926-SM-4AD5X 73.5
GTEX-WFJO-0826-SM-4LVM5 71.6
GTEX-11DYG-1326-SM-5N9DO 71.1
GTEX-XGQ4-1526-SM-4AT6H 70.9
GTEX-R55D-1126-SM-48FEB 69.7
GTEX-13O1R-1326-SM-5IJF5 68.6
GTEX-12WSL-1526-SM-5GCP8 68.4
GTEX-P4QS-0626-SM-3NMD1 68.1
GTEX-Y3I4-1226-SM-4TT8N 68.0
GTEX-111YS-0926-SM-5EGGI 67.6
GTEX-13CF3-1626-SM-5IFG9 67.2
GTEX-11EMC-2226-SM-5A5JW 66.6
GTEX-ZT9X-0526-SM-5GCOP 66.3
GTEX-146FH-1726-SM-5QGQ2 66.2
GTEX-11DZ1-2026-SM-5A5KG 66.0
GTEX-11LCK-1726-SM-5S2OQ 66.0
GTEX-13U4I-1126-SM-5LU3S 65.4
GTEX-NPJ8-1926-SM-3MJGB 65.4
GTEX-X15G-0826-SM-4PQZD 64.8
GTEX-14E6E-0726-SM-5S2R3 64.6
GTEX-WFG7-1126-SM-4LMK3 64.6
GTEX-131XF-0826-SM-5GICG 64.5
GTEX-ZYWO-1026-SM-5E45U 64.4
GTEX-139UW-1126-SM-5IJEJ 64.3
GTEX-QESD-0826-SM-47J4G 64.3
GTEX-13W3W-1626-SM-5LU35 64.1
GTEX-13S86-0826-SM-5SI6J 64.0
GTEX-145ME-0526-SM-5QGQV 63.7
GTEX-ZXES-1126-SM-5GZXN 63.7
GTEX-14BMU-0926-SM-5S2QB 63.6
GTEX-11EM3-0826-SM-5N9CC 63.4
GTEX-YFC4-1226-SM-5LU9R 63.1
GTEX-11NSD-1126-SM-5N9BQ 62.4
GTEX-S3XE-0926-SM-4AD4S 62.1
GTEX-V955-1126-SM-4JBH3 62.1
GTEX-QEG5-1426-SM-447AS 62.0
GTEX-13O3Q-0826-SM-5IFGF 61.9
GTEX-P78B-1026-SM-3NMC4 61.9
GTEX-XLM4-2326-SM-4TT2D 61.9
GTEX-OXRL-0626-SM-3NM9C 61.8
GTEX-144GN-0626-SM-5O9B2 61.7
GTEX-13111-0826-SM-5LZV3 61.6
GTEX-ZPU1-1426-SM-4WWFU 61.5
GTEX-132QS-1426-SM-5P9GE 61.4
GTEX-ZGAY-1126-SM-4WWBS 61.4
GTEX-T5JW-1326-SM-4DM5G 61.3
GTEX-XMK1-1326-SM-4B65Q 61.3
GTEX-13PVQ-1726-SM-5IFF3 61.2
GTEX-SUCS-0726-SM-4DM7J 61.1
GTEX-UPK5-1226-SM-4IHL8 61.1
GTEX-P4PQ-0626-SM-3NMCU 60.9
GTEX-WQUQ-1626-SM-4OOSH 60.8
GTEX-WFG8-1226-SM-4V6EI 60.7
GTEX-12WSD-1826-SM-5GCOA 60.6
GTEX-1211K-0926-SM-5FQTL 60.5
GTEX-ZY6K-0626-SM-59HJL 60.5
GTEX-132AR-2226-SM-5J2NT 60.4
GTEX-WK11-1026-SM-4OOS8 60.2
GTEX-YF7O-0926-SM-5IFIF 60.2
GTEX-ZAB5-0926-SM-5CVMV 60.2
GTEX-U3ZH-1026-SM-4DXUZ 60.1
GTEX-Y8LW-0726-SM-5IFI1 60.1
GTEX-144GO-2726-SM-5O9A2 60.0
GTEX-11DXX-1126-SM-5GZZK 59.8
GTEX-12WSA-1426-SM-5EGJU 59.7
GTEX-ZZ64-0226-SM-5E44X 59.5
GTEX-WOFM-0626-SM-4OOS3 59.2
GTEX-ZYW4-1326-SM-5E45N 59.0
GTEX-13O21-0626-SM-5IJDI 58.9
GTEX-144FL-2726-SM-5O98Z 58.9
GTEX-1399U-1026-SM-5J1OC 58.4
GTEX-14C38-2126-SM-5RQJO 58.4
GTEX-S4P3-0426-SM-4AD56 58.4
GTEX-PSDG-1326-SM-48TD2 58.3
GTEX-R55E-1326-SM-48FCR 58.3
GTEX-Y8E4-1726-SM-5LU9G 58.2
GTEX-1497J-2726-SM-5SI9W 58.1
GTEX-S7SF-0926-SM-4AD4M 58.0
GTEX-ZTPG-1626-SM-5DUX2 57.9
GTEX-U4B1-0826-SM-4DXTW 57.8
GTEX-PLZ5-0926-SM-3TW8L 57.5
GTEX-Y5V6-1026-SM-4VBS2 57.4
GTEX-139T6-0626-SM-5IFF9 57.2
GTEX-13X6K-2126-SM-5O9D4 57.2
GTEX-ZYY3-1526-SM-5SIA9 57.2
GTEX-ZVE2-1326-SM-5NQ94 56.9
GTEX-145MF-1426-SM-5O9B6 56.8
GTEX-13OVJ-1226-SM-5L3HA 56.5
GTEX-PVOW-1626-SM-48TC9 56.5
GTEX-144GM-1426-SM-5LU31 56.4
GTEX-11XUK-0826-SM-5GU6P 56.3
GTEX-QDVN-1026-SM-48TZA 56.3
GTEX-X3Y1-1326-SM-4PQZB 56.2
GTEX-QEL4-1426-SM-447AC 56.0
GTEX-T2IS-0826-SM-4DM6L 55.8
GTEX-TKQ1-0326-SM-4DXSM 55.8
GTEX-X4EO-1226-SM-4QARR 55.6
GTEX-X4LF-0626-SM-4QASB 55.6
GTEX-RNOR-1226-SM-48FDQ 55.5
GTEX-132Q8-1826-SM-5EGIY 55.4
GTEX-QLQ7-0926-SM-447BC 55.4
GTEX-1212Z-2126-SM-5FQTM 55.0
GTEX-XXEK-0326-SM-4BRVV 55.0
GTEX-11I78-1526-SM-5A5K7 54.9
GTEX-QEG4-0726-SM-4R1JL 54.7
GTEX-14ICL-0526-SM-5RQJ6 54.1
GTEX-R3RS-1326-SM-48FE7 54.1
GTEX-XQ3S-1126-SM-4BOPK 53.9
GTEX-145MN-1026-SM-5NQ9G 53.8
GTEX-REY6-1326-SM-48FDO 53.8
GTEX-13FTW-1626-SM-5KM4N 53.3
GTEX-RU1J-0326-SM-46MUM 53.3
GTEX-W5WG-1626-SM-4LMKG 53.0
GTEX-Q2AI-0626-SM-48TZU 52.8
GTEX-12696-1326-SM-5FQTJ 52.5
GTEX-VJYA-0726-SM-4KL1T 52.5
GTEX-TSE9-1226-SM-4DXTM 52.4
GTEX-QDVJ-0726-SM-48U1W 52.2
GTEX-Y5V5-1626-SM-4VDSG 51.9
GTEX-ZYT6-1126-SM-5GZYR 51.9
GTEX-OXRK-1326-SM-3NB1A 51.8
GTEX-S341-0526-SM-4AD5U 51.7
GTEX-XYKS-1526-SM-4BRUP 51.7
GTEX-ZAB4-1126-SM-5HL86 51.7
GTEX-11TUW-1326-SM-5EQKV 51.5
GTEX-ZYFG-1126-SM-5GICY 51.5
GTEX-QCQG-0626-SM-48U21 51.3
GTEX-QLQW-0526-SM-4R1KS 51.3
GTEX-R45C-1226-SM-48FEE 51.2
GTEX-12ZZW-1726-SM-5DUVD 51.1
GTEX-139TU-1226-SM-5J2NL 51.1
GTEX-ZF29-1326-SM-4WWB6 51.1
GTEX-11ZTS-2626-SM-5EGIC 51.0
GTEX-146FR-0426-SM-5SI97 51.0
GTEX-11P81-0826-SM-5P9GR 50.9
GTEX-145LS-1826-SM-5LUAZ 50.6
GTEX-147F3-0826-SM-5NQA7 50.6
GTEX-V1D1-1026-SM-4JBHE 50.4
GTEX-YEC3-2526-SM-4YCDN 50.4
GTEX-ZZPT-1426-SM-5N9C5 50.3
GTEX-11NUK-1326-SM-5P9GN 50.2
GTEX-13D11-1926-SM-5IFGB 50.2
GTEX-U3ZN-1726-SM-4DXUQ 50.2
GTEX-QV44-1126-SM-4R1KO 50.0
GTEX-ZF2S-1226-SM-4WWAX 49.6
GTEX-11P82-0526-SM-5986P 49.5
GTEX-S33H-0826-SM-4AD5Y 49.5
GTEX-ZG7Y-1126-SM-4WWEZ 49.5
GTEX-ZUA1-1226-SM-5NQ6O 49.5
GTEX-U8XE-1726-SM-4E3IF 49.4
GTEX-UPIC-1026-SM-4IHLT 49.4
GTEX-11GSP-1826-SM-5N9DQ 49.3
GTEX-12C56-1226-SM-5FQSU 49.3
GTEX-QVUS-0626-SM-447CC 49.3
GTEX-UJMC-0926-SM-4IHLK 49.3
GTEX-ZYVF-2226-SM-5GIDD 49.3
GTEX-OIZH-0626-SM-3NB1L 49.1
GTEX-11VI4-0526-SM-5EQ48 49.0
GTEX-OIZI-1426-SM-3NB1T 49.0
GTEX-XQ8I-1526-SM-4BOOH 48.9
GTEX-13G51-0926-SM-5IFFU 48.8
GTEX-UJHI-0826-SM-4IHLM 48.7
GTEX-U3ZM-0526-SM-4DXTB 48.6
GTEX-WVLH-1426-SM-4MVNX 48.6
GTEX-11DXZ-1226-SM-5H11L 47.4
GTEX-NFK9-1126-SM-3LK78 47.3
GTEX-RM2N-0726-SM-48FD5 47.3
GTEX-XOTO-2126-SM-4B64U 47.3
GTEX-14BIN-2726-SM-5RQIE 47.2
GTEX-WFON-0826-SM-4LVMI 47.1
GTEX-139YR-1726-SM-5IFFK 47.0
GTEX-OOBK-0625-SM-3LK5P 47.0
GTEX-SNMC-0526-SM-4DM69 46.9
GTEX-ZA64-0626-SM-5HL9O 46.9
GTEX-14H4A-1626-SM-5SI69 46.8
GTEX-13FLV-1126-SM-5J2NO 46.6
GTEX-13NZB-1226-SM-5J2MW 46.6
GTEX-XBED-1026-SM-48TCB 46.6
GTEX-Q2AH-0826-SM-48TZN 46.5
GTEX-Y9LG-0626-SM-4WWDH 46.5
GTEX-Y114-0926-SM-4TT7J 46.4
GTEX-1122O-1726-SM-5GICM 46.3
GTEX-11DXY-1426-SM-5N9CN 46.2
GTEX-145MO-1426-SM-5Q5BS 46.0
GTEX-XK95-1026-SM-4GIDV 46.0
GTEX-13OVG-0626-SM-5IFEP 45.7
GTEX-131XE-1426-SM-5HL7V 45.6
GTEX-WEY5-0926-SM-4LMI4 45.4
GTEX-12KS4-0926-SM-5BC5S 45.3
GTEX-148VJ-1026-SM-5LU98 45.0
GTEX-111CU-0726-SM-5GZYD 44.9
GTEX-YECK-1626-SM-5IFHQ 44.8
GTEX-Y5LM-1026-SM-4VDSQ 44.7
GTEX-14E1K-1226-SM-5S2PD 44.6
GTEX-XV7Q-1126-SM-4BRVS 44.6
GTEX-13QBU-1026-SM-5LU3R 44.4
GTEX-Z9EW-0526-SM-5HL8S 44.4
GTEX-PLZ6-0526-SM-3P61C 44.3
GTEX-R53T-1126-SM-48FD4 44.3
GTEX-S95S-0426-SM-4B64I 44.3
GTEX-ZVP2-1326-SM-57WCE 44.3
GTEX-RWS6-0826-SM-47JXF 44.2
GTEX-XUZC-0426-SM-4BOPE 44.2
GTEX-ZVT2-1326-SM-5E45H 43.9
GTEX-11ZU8-1526-SM-5EGHX 43.8
GTEX-R55C-0826-SM-48FCL 43.8
GTEX-PWN1-0626-SM-48TDT 43.7
GTEX-Y3IK-1126-SM-51MSV 43.6
GTEX-1399R-0826-SM-5IJEL 43.5
GTEX-11ONC-1526-SM-5GU6S 43.4
GTEX-12ZZX-1326-SM-5DUWI 43.3
GTEX-RTLS-1126-SM-46MUQ 43.3
GTEX-WH7G-0926-SM-4LVMJ 43.3
GTEX-WRHK-0526-SM-4MVOF 43.3
GTEX-1399S-1326-SM-5P9GH 43.2
GTEX-11EQ9-0726-SM-5A5K2 43.1
GTEX-ZQUD-0426-SM-57WFR 43.1
GTEX-ZE9C-1126-SM-4WWBD 43.0
GTEX-1399Q-1126-SM-5P9JA 42.8
GTEX-13FTX-0526-SM-5IFGS 42.8
GTEX-XUJ4-1026-SM-4BOPB 42.5
GTEX-13FHO-1726-SM-5IFGM 42.4
GTEX-13OVI-2626-SM-5KM4T 42.4
GTEX-131YS-1426-SM-5IJF7 42.3
GTEX-12WSK-1126-SM-5LZV8 42.2
GTEX-131XG-1026-SM-5GCMX 42.2
GTEX-T8EM-0526-SM-4DM64 42.2
GTEX-14AS3-0626-SM-5QGQD 42.0
GTEX-PLZ4-1626-SM-3P618 42.0
GTEX-XMD2-1326-SM-4YCET 42.0
GTEX-13PVR-1826-SM-5Q5CC 41.9
GTEX-ZPCL-1426-SM-57WEC 41.7
GTEX-P4QT-0626-SM-3NMCP 41.5
GTEX-13OW8-2326-SM-5L3I9 41.1
GTEX-YB5E-0926-SM-4WWDQ 41.0
GTEX-ZF3C-1626-SM-4WWB4 41.0
GTEX-145LT-1126-SM-5LUA1 40.9
GTEX-YJ89-1526-SM-5P9IR 40.9
GTEX-O5YV-1026-SM-3LK72 40.6
GTEX-145LV-1326-SM-5S2QI 40.5
GTEX-T5JC-1726-SM-4DM6U 40.4
GTEX-14DAQ-1426-SM-5RQJD 40.2
GTEX-OIZG-1026-SM-3LK5X 40.0
GTEX-XBEW-1326-SM-4AT63 39.9
GTEX-13W46-1926-SM-5J2MF 39.6
GTEX-ZTSS-0626-SM-59867 39.6
GTEX-117YX-1626-SM-5GZZG 38.6
GTEX-T6MO-0526-SM-4DM6R 38.5
GTEX-PWCY-0726-SM-48TCS 38.4
GTEX-SNOS-0626-SM-4DM5F 38.4
GTEX-R55G-1026-SM-48FDI 38.3
GTEX-13RTK-0526-SM-5S2QF 38.0
GTEX-TML8-1526-SM-4DXUX 37.5
GTEX-VUSG-1226-SM-4KKZF 37.4
GTEX-ZT9W-1326-SM-51MTB 37.4
GTEX-OXRP-0926-SM-48TC1 37.3
GTEX-12ZZY-1426-SM-5N9EI 37.2
GTEX-P4PP-0626-SM-3NM9X 37.1
GTEX-X585-1226-SM-46MW7 37.1
GTEX-N7MT-0326-SM-48TDP 36.8
GTEX-ZLV1-0526-SM-4WWD4 36.8
GTEX-RVPV-0526-SM-47JYL 36.6
GTEX-SE5C-1226-SM-4BRWV 36.3
GTEX-11P7K-1326-SM-5BC5G 36.1
GTEX-S4Q7-0626-SM-4AD5M 35.8
GTEX-ZC5H-1326-SM-5HL7E 35.5
GTEX-RN64-1026-SM-48FDX 35.2
GTEX-117YW-1926-SM-5H121 34.0
GTEX-X62O-2226-SM-46MW3 34.0
GTEX-12BJ1-1626-SM-5HL8Y 33.9
GTEX-X4XY-1726-SM-46MVO 32.5
GTEX-13QJ3-1726-SM-5RQK9 32.0
GTEX-OXRN-1726-SM-3NM9B 28.4
GTEX-14A6H-1326-SM-5NQBC 25.6
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

102.8

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 102.8
FF:10015-101C6 68,74,75 years, mixed 102.8

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