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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:109.6TPM
GTEx:51.8RPKM
FANTOM5:185.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA024344

 

Antibody CAB016113

 

Glandular cells

High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

109.6

overview Male, age 65
Sample 1
TPM: 108.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 100.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 123.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 106.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

51.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 51.8
Samples: 88

Max RPKM: 83.6
Min RPKM: 28.6
Std RPKM: 11
Median RPKM: 49.8
GTEX-UPK5-2026-SM-4JBIM 83.6
GTEX-131XG-1726-SM-5LZUR 78.8
GTEX-ZP4G-1626-SM-57WGD 74.4
GTEX-WFG8-1626-SM-4LVMB 70.7
GTEX-ZEX8-1826-SM-57WBH 70.4
GTEX-11VI4-1626-SM-5EQKO 69.3
GTEX-11NSD-1726-SM-5N9C3 68.9
GTEX-WRHK-1026-SM-4MVOD 68.3
GTEX-Y5LM-1626-SM-4VDTB 67.6
GTEX-X15G-1426-SM-4PQZK 67.5
GTEX-11P82-0826-SM-5P9GU 67.1
GTEX-11XUK-1426-SM-5EQMG 64.8
GTEX-VUSG-1726-SM-4KKZL 64.2
GTEX-Z9EW-0926-SM-5CVMM 64.1
GTEX-XGQ4-1326-SM-4GIDU 64.0
GTEX-148VJ-2226-SM-5NQ9M 64.0
GTEX-139YR-2226-SM-5IFFW 63.0
GTEX-133LE-1426-SM-5IFH1 62.8
GTEX-ZVP2-1726-SM-5GU5P 61.5
GTEX-WH7G-1626-SM-4LVMY 60.0
GTEX-1399U-2126-SM-5IFEZ 59.9
GTEX-13FH7-1226-SM-5IJFK 59.3
GTEX-13111-1426-SM-5DUW3 59.1
GTEX-WFJO-0926-SM-4LVM2 59.1
GTEX-ZYWO-1526-SM-5SIAL 58.0
GTEX-13FTW-2026-SM-5IJE2 57.8
GTEX-ZVT2-2126-SM-5NQ93 57.7
GTEX-139T6-1026-SM-5IJGC 56.6
GTEX-14E6E-1626-SM-5RQI7 55.9
GTEX-145ME-0926-SM-5O9AR 55.9
GTEX-13O61-1326-SM-5KM31 55.6
GTEX-WEY5-1526-SM-4LMJF 55.4
GTEX-13RTK-0826-SM-5Q5C6 54.4
GTEX-131XF-1326-SM-5GCMQ 53.4
GTEX-117YX-0326-SM-5GICL 52.8
GTEX-ZC5H-2326-SM-4WAYT 52.7
GTEX-ZLFU-1526-SM-4WWBT 52.3
GTEX-13QBU-1926-SM-5IJEW 52.3
GTEX-11EQ9-1326-SM-5985X 51.5
GTEX-1399R-2026-SM-5K7WN 51.0
GTEX-12BJ1-1926-SM-5HL9Z 51.0
GTEX-111CU-1326-SM-5NQ8L 50.9
GTEX-ZZ64-0526-SM-5GZXM 50.2
GTEX-ZQUD-0926-SM-57WE3 50.0
GTEX-XAJ8-0526-SM-47JYK 49.6
GTEX-ZA64-1226-SM-5HL7B 49.1
GTEX-1399S-2026-SM-5KM4B 49.1
GTEX-ZYFG-2026-SM-5E43Y 48.7
GTEX-145LT-1026-SM-5LU9O 48.4
GTEX-ZLV1-1126-SM-4WWBW 48.4
GTEX-14DAR-1426-SM-5RQIR 48.3
GTEX-WQUQ-2426-SM-4MVNW 47.9
GTEX-11DXX-1626-SM-5H11H 47.8
GTEX-ZTPG-2626-SM-57WFX 47.0
GTEX-13113-1226-SM-5EGHT 46.9
GTEX-ZPIC-2326-SM-57WDW 46.7
GTEX-13O21-1026-SM-5IJDU 46.5
GTEX-11I78-1126-SM-5A5K5 46.0
GTEX-1192X-2526-SM-59868 45.9
GTEX-11P7K-1626-SM-5GU63 45.9
GTEX-ZF2S-1726-SM-57WFT 45.7
GTEX-VJYA-0926-SM-4KL1N 45.4
GTEX-13D11-0726-SM-5LZZB 44.4
GTEX-Y114-1426-SM-4TT6W 44.3
GTEX-13CF3-1226-SM-5LZXN 44.0
GTEX-11DXZ-1326-SM-5H11X 43.8
GTEX-ZTX8-0526-SM-59HLD 43.7
GTEX-XBED-1426-SM-4AT4G 43.7
GTEX-XXEK-1026-SM-4BRUW 42.5
GTEX-ZQG8-2526-SM-57WEQ 42.5
GTEX-Y3IK-1726-SM-4YCCR 41.7
GTEX-ZXES-1526-SM-5NQ95 41.1
GTEX-YB5E-1526-SM-5IFIE 40.8
GTEX-Y9LG-1626-SM-5IFHM 40.8
GTEX-12WSK-1526-SM-5CVNO 40.7
GTEX-XUZC-1426-SM-4BRV3 40.3
GTEX-WFG7-1726-SM-4LVME 40.1
GTEX-13PL7-2626-SM-5IFH4 40.0
GTEX-13OVI-1926-SM-5IJCG 38.5
GTEX-XMK1-1826-SM-4B66F 38.4
GTEX-YF7O-1826-SM-5IFIU 38.0
GTEX-1122O-1326-SM-5H11F 37.3
GTEX-ZVZP-1826-SM-5GZXB 37.1
GTEX-ZTSS-0926-SM-59865 36.9
GTEX-X5EB-1626-SM-4E3IV 36.1
GTEX-YEC4-1726-SM-4W21E 35.8
GTEX-ZPCL-1726-SM-57WEO 33.7
GTEX-111YS-1426-SM-5GID8 28.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

185.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 185.3
FF:10024-101D6 15,40,85 years, mixed 185.3

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The Human Protein Atlas project is funded
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