We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
MKNK2
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:16.0RPKM
FANTOM5:76.2Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA021875

 

Antibody CAB037253

 

Glial cells

Low   Not detected  

Neuronal cells

Low   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

16.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 16.0
Samples: 117

Max RPKM: 51.1
Min RPKM: 4.6
Std RPKM: 7.6
Median RPKM: 13.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 51.1
GTEX-XMD1-0011-R5A-SM-4AT47 40.1
GTEX-13NYS-0011-R5a-SM-5MR4D 39.6
GTEX-WWYW-0011-R5A-SM-3NB3E 38.8
GTEX-NL3H-0011-R5a-SM-2I3GB 36.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 36.4
GTEX-12WSH-0011-R5b-SM-5P9F3 33.8
GTEX-139T8-0011-R5b-SM-5J1MO 31.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 29.0
GTEX-OXRN-0011-R5A-SM-2I5EF 28.9
GTEX-X4XX-0011-R5A-SM-46MWN 25.8
GTEX-X261-0011-R5A-SM-3NMB4 25.2
GTEX-13JVG-0011-R5a-SM-5MR4O 24.3
GTEX-13CIG-0011-R5b-SM-5L3F2 23.2
GTEX-1445S-0011-R5a-SM-5PNUS 22.2
GTEX-TSE9-0011-R5A-SM-3DB7J 21.5
GTEX-13X6I-0011-R5a-SM-5PNWW 21.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 20.5
GTEX-14BIM-0011-R5b-SM-5S2RM 20.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 19.8
GTEX-NL4W-0011-R5a-SM-2I3GD 19.7
GTEX-11GSP-0011-R5a-SM-57WBE 19.0
GTEX-13S7M-0011-R5b-SM-5P9HS 18.9
GTEX-132Q8-0011-R5a-SM-5IJDM 18.4
GTEX-13OW6-0011-R5a-SM-5O9BK 18.4
GTEX-ZV68-0011-R5a-SM-4YCDW 18.4
GTEX-12WSF-0011-R5a-SM-5HL8K 18.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 18.1
GTEX-13FLV-0011-R5a-SM-5LZWT 18.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 18.1
GTEX-13OVH-0011-R5b-SM-5KM4L 18.1
GTEX-13O3O-0011-R5b-SM-5KM44 18.0
GTEX-NPJ7-0011-R5a-SM-33HBK 17.4
GTEX-13OW5-0011-R5b-SM-5L3FR 17.3
GTEX-144GO-0011-R5a-SM-5PNUR 16.8
GTEX-X585-0011-R5A-SM-46MVI 16.8
GTEX-11H98-0011-R5b-SM-57WCF 16.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 16.2
GTEX-13CZV-0011-R5a-SM-5K7XA 16.1
GTEX-N7MT-0011-R5a-SM-2I3G6 16.1
GTEX-12ZZX-0011-R5a-SM-5HL89 16.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 16.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 16.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 15.8
GTEX-139TS-0011-R5b-SM-5J2MZ 15.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 15.8
GTEX-13NYB-0011-R5a-SM-5MR45 15.5
GTEX-12WSB-0011-R5b-SM-5GU67 15.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 15.0
GTEX-145LS-0011-R5a-SM-5SI65 14.9
GTEX-RU72-0011-R5A-SM-2TF6U 14.7
GTEX-13SLX-0011-R5a-SM-5O9BV 14.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 14.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 14.3
GTEX-T5JC-0011-R5A-SM-32PLK 14.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 14.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 13.9
GTEX-13FLW-0011-R5a-SM-5LZX6 13.9
GTEX-13X6K-0011-R5b-SM-5PNUE 13.7
GTEX-WZTO-0011-R5B-SM-3NMC5 13.6
GTEX-13JUV-0011-R5a-SM-5LZY5 13.5
GTEX-145MH-0011-R5a-SM-5P9JT 13.5
GTEX-XOTO-0011-R5A-SM-4B657 13.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 13.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 13.2
GTEX-WVLH-0011-R5A-SM-3MJFW 13.2
GTEX-ZXG5-0011-R5b-SM-57WBN 13.2
GTEX-OHPN-0011-R5A-SM-2I5FF 13.1
GTEX-13FXS-0011-R5b-SM-5LZYE 13.0
GTEX-14BIN-0011-R5b-SM-5SI78 12.8
GTEX-RVPU-0011-R5A-SM-2XCAD 12.8
GTEX-RVPV-0011-R5A-SM-2TF69 12.6
GTEX-131YS-0011-R5b-SM-5K7YB 12.4
GTEX-13OVL-0011-R5b-SM-5L3FU 12.4
GTEX-YFC4-0011-R5a-SM-4RGLR 12.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 12.3
GTEX-R55E-0011-R5A-SM-2TC5N 12.3
GTEX-N7MS-0011-R5a-SM-2HMK8 12.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 12.0
GTEX-13112-0011-R5b-SM-5DUV8 11.9
GTEX-13OW7-0011-R5b-SM-5O9DM 11.9
GTEX-13VXU-0011-R5a-SM-5O9D7 11.9
GTEX-11UD1-0011-R5b-SM-5P9FP 11.7
GTEX-P44H-0011-R5A-SM-2XCEX 11.7
GTEX-S7PM-0011-R5A-SM-3NM8G 11.7
GTEX-T6MN-0011-R5A-SM-32QPD 11.6
GTEX-WL46-0011-R5A-SM-3LK6V 11.5
GTEX-ZUA1-0011-R5b-SM-51MTG 11.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 11.4
GTEX-1399T-0011-R5b-SM-5IJDK 11.1
GTEX-13G51-0011-R5a-SM-5L3EB 11.0
GTEX-1477Z-0011-R5b-SM-5PNUO 10.9
GTEX-S7SE-0011-R5A-SM-2XCDA 10.9
GTEX-ZE7O-0011-R5a-SM-57WBO 10.9
GTEX-ZVT3-0011-R5a-SM-51MSI 10.8
GTEX-11WQC-0011-R5a-SM-5BC74 10.6
GTEX-QVJO-0011-R5A-SM-2S1QM 10.6
GTEX-11OF3-0011-R5a-SM-57WB4 10.5
GTEX-13FHP-0011-R5b-SM-5LZY2 10.5
GTEX-YJ89-0011-R5a-SM-4V6GM 10.4
GTEX-UTHO-0011-R5A-SM-3GIJD 10.3
GTEX-144GL-0011-R5b-SM-5PNUJ 10.2
GTEX-12WSC-0011-R5b-SM-5CVNS 10.1
GTEX-12WSD-0011-R5b-SM-5CVNG 9.9
GTEX-14ABY-0011-R5b-SM-5SI7B 9.9
GTEX-13NZA-0011-R5b-SM-5KM4K 9.6
GTEX-Z93S-0011-R5b-SM-4RGNI 9.4
GTEX-139TT-0011-R5b-SM-5K7W8 9.3
GTEX-QMR6-0011-R5A-SM-32PKT 9.3
GTEX-12WSA-0011-R5b-SM-5GU5I 9.2
GTEX-11NV4-0011-R5a-SM-5NQ88 8.5
GTEX-1313W-0011-R5b-SM-5L3EP 8.5
GTEX-PVOW-0011-R5A-SM-32PL7 8.3
GTEX-13X6J-0011-R5b-SM-5PNWT 8.1
GTEX-13CF2-0011-R5a-SM-5LZWS 7.6
GTEX-145MG-0011-R5b-SM-5S2VU 6.7
GTEX-T2IS-0011-R5A-SM-32QP4 4.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

76.2

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 76.2
FF:10164-103B2 76 years, female 102.0
FF:10379-105H1 89 years, female 50.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.