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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9.9TPM
GTEx:5.3RPKM
FANTOM5:9.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA048315

  

Adipocytes

 Not detected  

Fibroblasts

 Low  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:High
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA047893

  

Antibody HPA048315

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 High   Low  

Peripheral nerve

 Medium   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

9.9
N/A Female, age 80
Sample 1
TPM: 14.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 7.5
N/A Female, age 57
Sample 3
TPM: 6.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 11.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 9.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

5.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 5.8
Samples: 350

Max RPKM: 10
Min RPKM: 2.3
Std RPKM: 1.2
Median RPKM: 5.7
GTEX-TML8-2026-SM-32QOP 10.0
GTEX-XBEC-0326-SM-4AT4M 8.9
GTEX-Y111-0226-SM-4SOIW 8.9
GTEX-S7SE-0226-SM-2XCD4 8.8
GTEX-13FHP-0226-SM-5K7WD 8.7
GTEX-RVPU-2326-SM-2TF6R 8.7
GTEX-Y8E5-0226-SM-57WCM 8.6
GTEX-148VI-1726-SM-5S2W9 8.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 4.5
Samples: 227

Max RPKM: 7.6
Min RPKM: 1.5
Std RPKM: 1.2
Median RPKM: 4.4
GTEX-Y8E4-1226-SM-5IFIM 7.6
GTEX-WYVS-0626-SM-4SOJY 7.5
GTEX-XMK1-0926-SM-4B66X 7.4
GTEX-XQ8I-1426-SM-4BOPW 7.1
GTEX-11DXY-0326-SM-5H12F 7.0
GTEX-13N11-1826-SM-5IJDS 7.0
GTEX-13U4I-1726-SM-5J1MF 7.0
GTEX-14A6H-1026-SM-5SIAZ 7.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

9.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 9.4
FF:10010-101C1 65,65,76 years, mixed 9.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.