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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:45.2TPM
GTEx:58.3RPKM
FANTOM5:298.6Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:High
Myoepithelial cells:High
 

Antibody staining

Antibody HPA001209

 

Adipocytes

Medium  

Glandular cells

High  

Myoepithelial cells

High  
 
 
 

BREAST - HPA RNA-seq

Average TPM

45.2

overview Female, age 52
Sample 1
TPM: 60.3
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 49.4
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 44.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 26.4
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

58.3

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 58.3
Samples: 214

Max RPKM: 120.4
Min RPKM: 20.9
Std RPKM: 22.9
Median RPKM: 53.9
GTEX-YEC3-1026-SM-5IFI5 120.4
GTEX-139T6-1626-SM-5PNYZ 120.3
GTEX-12BJ1-1826-SM-5HL9N 119.0
GTEX-ZA64-1526-SM-5CVMD 117.4
GTEX-YFCO-1826-SM-4W1YH 117.3
GTEX-1399U-1826-SM-5PNZ1 115.7
GTEX-ZDYS-1126-SM-5K7UB 108.0
GTEX-XGQ4-0926-SM-4AT4U 107.2
GTEX-ZLFU-2126-SM-4WWEV 106.3
GTEX-13O61-1826-SM-5KM4I 104.6
GTEX-ZF29-1926-SM-5S2P1 104.3
GTEX-ZQG8-0726-SM-5P9H9 99.3
GTEX-ZDTT-2126-SM-5S2OJ 98.9
GTEX-RWS6-1926-SM-47JXY 97.9
GTEX-REY6-2426-SM-48FF5 97.7
GTEX-ZQUD-1926-SM-51MSA 97.4
GTEX-Y8LW-1626-SM-5IFHX 96.8
GTEX-11P7K-0726-SM-5EGKX 95.3
GTEX-11P82-1326-SM-5HL62 94.6
GTEX-WYJK-1326-SM-3NB2T 94.1
GTEX-11ZTT-2326-SM-5EQLG 93.8
GTEX-T6MO-0326-SM-32QOK 92.6
GTEX-1211K-1926-SM-5EQLB 92.5
GTEX-ZZ64-1226-SM-5E43R 92.3
GTEX-PSDG-1626-SM-48TCQ 90.7
GTEX-13FTW-1426-SM-5LZWZ 90.6
GTEX-R55D-0826-SM-48FEA 89.5
GTEX-11EM3-1326-SM-5N9C6 88.9
GTEX-XBED-1626-SM-47JYN 88.2
GTEX-13D11-1026-SM-5IJFB 85.9
GTEX-XUJ4-1926-SM-4BOOV 85.7
GTEX-S4UY-0726-SM-4AD6X 85.1
GTEX-ZZPU-0626-SM-5E43T 84.5
GTEX-Y3I4-1526-SM-4TT7K 82.9
GTEX-145MN-1926-SM-5SIAI 82.4
GTEX-12WSK-2226-SM-5GCO5 81.9
GTEX-ZXES-0826-SM-5E43C 80.6
GTEX-13W3W-1226-SM-5LU4H 79.8
GTEX-ZTX8-1226-SM-4YCE9 79.6
GTEX-Y9LG-1426-SM-5IFJZ 79.3
GTEX-UJHI-1426-SM-3DB9C 78.3
GTEX-ZV6S-1826-SM-5NQ8D 77.3
GTEX-S4Q7-1126-SM-4AD6R 77.1
GTEX-XQ8I-2426-SM-4WAXY 76.6
GTEX-XUW1-2326-SM-4BOO5 76.1
GTEX-1122O-1226-SM-5H113 75.6
GTEX-WXYG-2226-SM-4E3IM 74.9
GTEX-Y5V6-2126-SM-4WWFX 74.5
GTEX-13CF3-2126-SM-5IFJP 74.3
GTEX-ZV7C-1826-SM-5NQ83 74.2
GTEX-XUZC-1626-SM-4BRVP 73.7
GTEX-14E6E-1326-SM-5S2NR 73.2
GTEX-ZLV1-1426-SM-4WWES 73.0
GTEX-11LCK-2426-SM-5HL5F 72.9
GTEX-117YX-1426-SM-5H12H 71.8
GTEX-TMMY-0726-SM-33HBE 71.8
GTEX-YB5K-1626-SM-5IFIN 71.7
GTEX-S4P3-1326-SM-4AD6V 71.4
GTEX-11DXZ-1926-SM-5GZZL 70.3
GTEX-U3ZN-1926-SM-4DXSG 70.2
GTEX-X261-0626-SM-3NMD9 70.2
GTEX-Y114-2026-SM-4TT7L 69.9
GTEX-Y5V5-2126-SM-4WWFO 68.3
GTEX-12ZZX-1126-SM-5EGKB 68.0
GTEX-X15G-1626-SM-3NMB3 67.8
GTEX-13FTX-1126-SM-5N9EN 67.3
GTEX-T2IS-1526-SM-32QPR 67.1
GTEX-132Q8-1426-SM-5EGK7 67.0
GTEX-12WSN-1326-SM-5GCNT 66.7
GTEX-ZVT2-1826-SM-5NQ8W 66.0
GTEX-TKQ1-0226-SM-33HB5 65.5
GTEX-145ME-1526-SM-5Q5F2 65.3
GTEX-WFON-1826-SM-3GILG 65.0
GTEX-11TT1-2126-SM-5GU5Y 64.6
GTEX-11I78-2226-SM-5PNYA 63.9
GTEX-Y8E4-1626-SM-5S2MW 63.8
GTEX-ZT9W-2026-SM-51MRA 63.7
GTEX-SE5C-2126-SM-4BRUJ 63.6
GTEX-R53T-1526-SM-48FEK 63.3
GTEX-133LE-1726-SM-5K7VQ 62.8
GTEX-ZPIC-1126-SM-5BC7F 62.4
GTEX-S341-1526-SM-4AD6K 62.1
GTEX-11NSD-0926-SM-5N9DR 61.9
GTEX-QMRM-1626-SM-4R1KV 61.5
GTEX-111YS-1926-SM-5GICC 60.9
GTEX-145LT-0726-SM-5S2VM 60.6
GTEX-WI4N-1426-SM-3LK7H 60.5
GTEX-ZC5H-2626-SM-5J2MG 59.6
GTEX-ZY6K-1626-SM-5GZWV 58.6
GTEX-13NZB-2126-SM-5MR4Y 58.2
GTEX-144GM-0926-SM-5O994 57.9
GTEX-ZYWO-2326-SM-5GZY4 57.6
GTEX-ZVT4-1026-SM-57WC4 57.4
GTEX-X4EP-2926-SM-3P5YQ 57.1
GTEX-13113-1726-SM-5GCOO 57.0
GTEX-12KS4-0126-SM-5Q5A5 56.9
GTEX-S32W-2026-SM-4AD6E 56.1
GTEX-U412-1826-SM-4DXTJ 55.8
GTEX-WY7C-2726-SM-3NB3P 55.8
GTEX-XV7Q-2326-SM-4BRVZ 55.5
GTEX-11EQ9-1826-SM-5Q5AJ 55.4
GTEX-QEL4-2126-SM-447AE 55.4
GTEX-U3ZH-1426-SM-4DXSR 54.6
GTEX-YB5E-1726-SM-5IFJ3 54.6
GTEX-13PL6-2926-SM-5L3I2 54.4
GTEX-RU72-0626-SM-46MUI 54.0
GTEX-XOT4-0726-SM-4GIAW 54.0
GTEX-13OW5-2226-SM-5L3HC 53.9
GTEX-ZVE2-1226-SM-5NQ8R 53.7
GTEX-RUSQ-2026-SM-4GIAK 53.1
GTEX-TML8-1226-SM-32QON 52.9
GTEX-11EMC-2026-SM-5A5JV 52.8
GTEX-13N11-1726-SM-5J1OJ 52.4
GTEX-11TUW-1826-SM-5BC5D 52.3
GTEX-ZAJG-0626-SM-5HL8X 52.1
GTEX-ZAB4-2526-SM-5HL8M 51.7
GTEX-147F4-2826-SM-5NQBN 51.1
GTEX-14AS3-1626-SM-5S2OY 50.8
GTEX-1269C-2426-SM-5FQSN 50.6
GTEX-12WSM-1726-SM-5BC6J 50.5
GTEX-WYVS-1726-SM-3NMAY 50.5
GTEX-13N1W-0626-SM-5MR4U 50.3
GTEX-1192X-2326-SM-5987X 50.1
GTEX-13NZ8-0126-SM-5IJCT 50.1
GTEX-XMD1-0826-SM-4AT52 50.0
GTEX-Y3IK-2326-SM-4WWDT 49.1
GTEX-ZF3C-2326-SM-5S2MZ 48.6
GTEX-11P81-1926-SM-5BC53 48.5
GTEX-13FTY-2226-SM-5J1ND 48.4
GTEX-11WQC-1726-SM-5GU4W 48.3
GTEX-R3RS-0626-SM-48FE1 47.6
GTEX-XMK1-1126-SM-4IHJ8 47.6
GTEX-VUSG-2226-SM-4KKZO 47.0
GTEX-Y5LM-1726-SM-4VDSX 47.0
GTEX-UPK5-2326-SM-3P5Z8 46.6
GTEX-R55F-1726-SM-2TF4R 46.5
GTEX-145MO-0826-SM-5NQBL 46.3
GTEX-QVJO-1826-SM-447C9 46.1
GTEX-131YS-0626-SM-5EGKL 46.0
GTEX-1117F-2826-SM-5GZXL 45.6
GTEX-SIU7-1626-SM-4BRUK 45.6
GTEX-QEG5-0726-SM-4R1JQ 44.8
GTEX-11PRG-0826-SM-5EQ6A 44.5
GTEX-ZU9S-1926-SM-5NQBP 44.3
GTEX-WYBS-0926-SM-3NM94 44.2
GTEX-13QIC-2326-SM-5LU5N 43.9
GTEX-13W46-0826-SM-5LU3H 43.7
GTEX-ZEX8-2226-SM-57WC6 43.6
GTEX-T5JC-2126-SM-32PMO 43.5
GTEX-ZF2S-2026-SM-5E461 43.1
GTEX-14753-2426-SM-5LU8U 42.8
GTEX-X4XY-0926-SM-4E3JD 42.8
GTEX-QDT8-0626-SM-48TYW 42.2
GTEX-11ZUS-0826-SM-5FQUY 42.0
GTEX-13NZ9-1026-SM-5MR5K 41.6
GTEX-13S86-1226-SM-5S2OA 40.5
GTEX-Q2AG-0326-SM-48U1O 40.5
GTEX-ZYT6-0126-SM-5E45J 40.4
GTEX-131XW-0726-SM-5EGK3 40.1
GTEX-11ONC-2126-SM-5HL6E 39.8
GTEX-13OW8-0226-SM-5K7UP 39.8
GTEX-146FH-0826-SM-5SI8T 39.4
GTEX-UTHO-1026-SM-3GAF7 39.2
GTEX-XQ3S-1326-SM-4BOPQ 38.9
GTEX-13PVQ-1026-SM-5KM3M 38.6
GTEX-WOFL-0826-SM-3MJG1 38.6
GTEX-ZYW4-0826-SM-5GIDG 38.5
GTEX-1314G-1226-SM-5BC6D 38.4
GTEX-139T8-0826-SM-5L3DE 38.4
GTEX-11GS4-2126-SM-5A5KR 38.2
GTEX-144GL-2026-SM-5LU3O 37.5
GTEX-13O3O-0826-SM-5K7WE 37.4
GTEX-11EI6-0626-SM-5985T 37.3
GTEX-13O3Q-2226-SM-5KM4O 37.2
GTEX-YFC4-1426-SM-5IFJG 37.2
GTEX-XMD2-0926-SM-4WWEF 37.0
GTEX-YJ8O-2226-SM-5IFHW 36.4
GTEX-ZWKS-2826-SM-5NQ74 36.4
GTEX-132AR-0826-SM-5EGK6 36.3
GTEX-117XS-1926-SM-5GICO 35.9
GTEX-U8XE-0826-SM-4E3J1 35.7
GTEX-T6MN-0726-SM-32PML 35.6
GTEX-11GSO-1926-SM-5A5K3 35.4
GTEX-11WQK-2426-SM-5GU5C 35.4
GTEX-11DZ1-0326-SM-5N9BN 35.3
GTEX-13FHO-0826-SM-5L3E8 35.3
GTEX-12WSB-0626-SM-59HJO 34.6
GTEX-139TU-0626-SM-5KM3X 33.4
GTEX-T5JW-2026-SM-4DM63 33.4
GTEX-13O3P-0826-SM-5L3DH 33.3
GTEX-132NY-0826-SM-5K7Y7 33.1
GTEX-13CF2-2026-SM-5K7VI 33.1
GTEX-11DXY-2326-SM-5GICW 33.0
GTEX-WRHU-0326-SM-3MJFY 33.0
GTEX-Y111-2026-SM-4SOJA 32.9
GTEX-ZVTK-0326-SM-51MRR 30.5
GTEX-ZUA1-1526-SM-59HLS 30.4
GTEX-T2YK-2226-SM-32QPT 30.2
GTEX-14ABY-2126-SM-5QGQZ 29.7
GTEX-TKQ2-1826-SM-33HB2 29.7
GTEX-VJWN-0726-SM-3GIJ8 29.1
GTEX-11O72-2126-SM-5N9FO 28.4
GTEX-11OF3-1926-SM-59889 28.0
GTEX-ZTTD-1026-SM-51MRD 27.7
GTEX-11DXW-0626-SM-5N9ER 27.1
GTEX-11NV4-2026-SM-5N9DG 26.8
GTEX-1313W-0826-SM-5EQ4T 26.8
GTEX-ZDXO-0126-SM-5S2ND 26.8
GTEX-XYKS-1326-SM-4BRUN 26.7
GTEX-ZVZQ-0826-SM-51MRF 26.2
GTEX-S33H-0326-SM-4AD6N 25.1
GTEX-W5X1-2326-SM-3GIL6 24.7
GTEX-S7SE-0826-SM-4AT4D 21.0
GTEX-ZYFC-0826-SM-5E44K 20.9
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

298.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 298.6
FF:10080-102A8 77 years, female 298.6

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