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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:29.7RPKM
FANTOM5:162.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:High
 

Antibody staining

Antibody HPA001209

 

Glial cells

High  

Neuronal cells

High  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

29.7

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 29.7
Samples: 117

Max RPKM: 132.8
Min RPKM: 6.5
Std RPKM: 16.2
Median RPKM: 27.2
GTEX-X4XX-0011-R5A-SM-46MWN 132.8
GTEX-X585-0011-R5A-SM-46MVI 80.3
GTEX-12WSA-0011-R5b-SM-5GU5I 64.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60.6
GTEX-13X6I-0011-R5a-SM-5PNWW 57.1
GTEX-WL46-0011-R5A-SM-3LK6V 56.5
GTEX-N7MS-0011-R5a-SM-2HMK8 55.6
GTEX-RVPV-0011-R5A-SM-2TF69 54.7
GTEX-WZTO-0011-R5B-SM-3NMC5 50.9
GTEX-13FLV-0011-R5a-SM-5LZWT 48.6
GTEX-13OVH-0011-R5b-SM-5KM4L 47.9
GTEX-13JVG-0011-R5a-SM-5MR4O 46.5
GTEX-R55E-0011-R5A-SM-2TC5N 45.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 45.4
GTEX-WWYW-0011-R5A-SM-3NB3E 45.2
GTEX-XMD1-0011-R5A-SM-4AT47 43.6
GTEX-13O3O-0011-R5b-SM-5KM44 42.7
GTEX-144GO-0011-R5a-SM-5PNUR 42.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 42.5
GTEX-XOTO-0011-R5A-SM-4B657 42.4
GTEX-12WSB-0011-R5b-SM-5GU67 41.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 41.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 40.4
GTEX-11NV4-0011-R5a-SM-5NQ88 40.3
GTEX-12WSF-0011-R5a-SM-5HL8K 39.4
GTEX-13NYB-0011-R5a-SM-5MR45 39.1
GTEX-Z93S-0011-R5b-SM-4RGNI 38.2
GTEX-PVOW-0011-R5A-SM-32PL7 37.8
GTEX-13S7M-0011-R5b-SM-5P9HS 37.4
GTEX-132Q8-0011-R5a-SM-5IJDM 36.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 35.7
GTEX-1445S-0011-R5a-SM-5PNUS 35.4
GTEX-13FXS-0011-R5b-SM-5LZYE 35.2
GTEX-11H98-0011-R5b-SM-57WCF 35.1
GTEX-NL4W-0011-R5a-SM-2I3GD 34.2
GTEX-X261-0011-R5A-SM-3NMB4 34.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 33.7
GTEX-NL3H-0011-R5a-SM-2I3GB 33.6
GTEX-11GSP-0011-R5a-SM-57WBE 32.6
GTEX-14BIN-0011-R5b-SM-5SI78 32.0
GTEX-QMR6-0011-R5A-SM-32PKT 31.5
GTEX-ZXG5-0011-R5b-SM-57WBN 31.4
GTEX-145LS-0011-R5a-SM-5SI65 31.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 30.3
GTEX-13NYS-0011-R5a-SM-5MR4D 30.1
GTEX-13OW5-0011-R5b-SM-5L3FR 30.0
GTEX-13OW7-0011-R5b-SM-5O9DM 29.8
GTEX-QVJO-0011-R5A-SM-2S1QM 29.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 29.6
GTEX-WVLH-0011-R5A-SM-3MJFW 29.4
GTEX-13112-0011-R5b-SM-5DUV8 29.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 29.1
GTEX-13X6K-0011-R5b-SM-5PNUE 29.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 28.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 28.7
GTEX-13FHP-0011-R5b-SM-5LZY2 28.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 27.4
GTEX-13OVL-0011-R5b-SM-5L3FU 27.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 27.2
GTEX-131YS-0011-R5b-SM-5K7YB 27.1
GTEX-13SLX-0011-R5a-SM-5O9BV 26.9
GTEX-N7MT-0011-R5a-SM-2I3G6 26.4
GTEX-OHPN-0011-R5A-SM-2I5FF 26.4
GTEX-144GL-0011-R5b-SM-5PNUJ 25.5
GTEX-14BIM-0011-R5b-SM-5S2RM 25.5
GTEX-RVPU-0011-R5A-SM-2XCAD 24.8
GTEX-13FLW-0011-R5a-SM-5LZX6 24.7
GTEX-RU72-0011-R5A-SM-2TF6U 23.6
GTEX-ZVT3-0011-R5a-SM-51MSI 23.6
GTEX-YFC4-0011-R5a-SM-4RGLR 23.5
GTEX-11WQC-0011-R5a-SM-5BC74 23.3
GTEX-13JUV-0011-R5a-SM-5LZY5 23.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 23.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 22.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 22.5
GTEX-T5JC-0011-R5A-SM-32PLK 21.6
GTEX-13OW6-0011-R5a-SM-5O9BK 21.4
GTEX-NPJ7-0011-R5a-SM-33HBK 21.2
GTEX-13CZV-0011-R5a-SM-5K7XA 21.0
GTEX-145MH-0011-R5a-SM-5P9JT 21.0
GTEX-ZUA1-0011-R5b-SM-51MTG 20.9
GTEX-13VXU-0011-R5a-SM-5O9D7 20.8
GTEX-12WSD-0011-R5b-SM-5CVNG 19.9
GTEX-S7SE-0011-R5A-SM-2XCDA 19.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 18.9
GTEX-14ABY-0011-R5b-SM-5SI7B 18.7
GTEX-1399T-0011-R5b-SM-5IJDK 18.5
GTEX-13G51-0011-R5a-SM-5L3EB 18.1
GTEX-139TS-0011-R5b-SM-5J2MZ 17.9
GTEX-1313W-0011-R5b-SM-5L3EP 17.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 17.7
GTEX-P44H-0011-R5A-SM-2XCEX 17.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 17.4
GTEX-12WSC-0011-R5b-SM-5CVNS 17.2
GTEX-12ZZX-0011-R5a-SM-5HL89 17.0
GTEX-ZE7O-0011-R5a-SM-57WBO 16.8
GTEX-13X6J-0011-R5b-SM-5PNWT 16.6
GTEX-139T8-0011-R5b-SM-5J1MO 16.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 16.3
GTEX-13CF2-0011-R5a-SM-5LZWS 15.9
GTEX-UTHO-0011-R5A-SM-3GIJD 15.7
GTEX-1477Z-0011-R5b-SM-5PNUO 15.2
GTEX-13CIG-0011-R5b-SM-5L3F2 15.0
GTEX-12WSH-0011-R5b-SM-5P9F3 14.9
GTEX-11OF3-0011-R5a-SM-57WB4 14.6
GTEX-11UD1-0011-R5b-SM-5P9FP 14.3
GTEX-OXRN-0011-R5A-SM-2I5EF 14.0
GTEX-T6MN-0011-R5A-SM-32QPD 13.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 13.7
GTEX-TSE9-0011-R5A-SM-3DB7J 13.6
GTEX-ZV68-0011-R5a-SM-4YCDW 13.6
GTEX-S7PM-0011-R5A-SM-3NM8G 13.5
GTEX-139TT-0011-R5b-SM-5K7W8 11.6
GTEX-YJ89-0011-R5a-SM-4V6GM 9.2
GTEX-13NZA-0011-R5b-SM-5KM4K 7.7
GTEX-145MG-0011-R5b-SM-5S2VU 6.5
GTEX-T2IS-0011-R5A-SM-32QP4 6.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

162.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 162.3
FF:10164-103B2 76 years, female 164.3
FF:10379-105H1 89 years, female 160.4

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