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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:40.1TPM
GTEx:25.7RPKM
FANTOM5:153.4Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:High
Hepatocytes:Medium
 

Antibody staining

Antibody HPA001209

 

Bile duct cells

High  

Hepatocytes

Medium  
 
 
 

LIVER - HPA RNA-seq

Average TPM

40.1

N/A Female, age 60
Sample 1
TPM: 47.1
overview Male, age 54
Sample 2
TPM: 67.4
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 48.5
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 21.5
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 13.2
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 26.4
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 40.1
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 51.4
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 34.9
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 50.5
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

25.7

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 25.7
Samples: 119

Max RPKM: 48.6
Min RPKM: 6.9
Std RPKM: 8.6
Median RPKM: 24.8
GTEX-QDVN-0826-SM-48TZ2 48.6
GTEX-13PVR-0126-SM-5S2PY 47.6
GTEX-X3Y1-2726-SM-4PQZH 46.1
GTEX-ZF29-2026-SM-4WWB7 46.1
GTEX-13113-1326-SM-5GCOI 45.6
GTEX-Z9EW-0426-SM-5CVM9 44.3
GTEX-WFON-1726-SM-4LVMQ 41.7
GTEX-S4Z8-0526-SM-4AD4T 39.5
GTEX-RM2N-1926-SM-48FCU 39.1
GTEX-QV44-0326-SM-4R1KD 38.8
GTEX-13FTW-1126-SM-5J2NV 37.5
GTEX-YEC4-0826-SM-5P9FV 36.9
GTEX-14E1K-0326-SM-5S2PE 36.8
GTEX-11EQ9-0526-SM-5A5JZ 36.3
GTEX-ZZPU-0426-SM-5GZYH 36.1
GTEX-1399R-1226-SM-5P9GF 35.5
GTEX-X4XY-1626-SM-46MVN 34.5
GTEX-OOBJ-0826-SM-3NB2K 34.3
GTEX-R53T-0326-SM-48FEC 34.2
GTEX-ZF2S-3026-SM-4WWCH 33.8
GTEX-Y5V5-0926-SM-4VBPZ 33.6
GTEX-WQUQ-1926-SM-4OOSA 33.2
GTEX-VUSG-0126-SM-4KL1X 33.1
GTEX-14753-1626-SM-5NQ9L 32.4
GTEX-11DXZ-0126-SM-5EGGY 32.2
GTEX-UPK5-1426-SM-4JBHH 31.5
GTEX-14DAQ-1726-SM-5S2R2 31.4
GTEX-TKQ2-1726-SM-4DXUP 31.4
GTEX-132NY-0926-SM-5P9G3 31.3
GTEX-13NZ9-1326-SM-5MR3V 31.1
GTEX-ZVP2-0626-SM-51MSO 31.1
GTEX-RTLS-1326-SM-46MUN 30.9
GTEX-WYVS-1926-SM-4PQZ2 30.9
GTEX-RWSA-1426-SM-47JXA 30.7
GTEX-ZPU1-0826-SM-57WG2 30.5
GTEX-X4EP-1026-SM-4QAS5 30.3
GTEX-146FH-1526-SM-5NQBU 30.0
GTEX-REY6-1226-SM-48FDR 29.5
GTEX-ZAB5-0426-SM-5CVMI 29.5
GTEX-UPIC-0926-SM-4IHLV 29.4
GTEX-YFC4-1526-SM-5IFJS 29.2
GTEX-14AS3-0126-SM-5Q5F4 28.8
GTEX-PX3G-0826-SM-48TZS 28.6
GTEX-1497J-0726-SM-5Q5D1 28.4
GTEX-1212Z-0226-SM-59HLF 27.9
GTEX-X261-1726-SM-4PQYT 27.8
GTEX-ZVT4-0626-SM-5E45T 27.7
GTEX-ZYT6-0626-SM-5E45V 26.9
GTEX-P78B-1326-SM-3P611 26.7
GTEX-QEL4-1226-SM-447A4 26.5
GTEX-13N2G-0926-SM-5IFGJ 26.4
GTEX-12WSM-0726-SM-5GCOW 26.3
GTEX-YB5E-0326-SM-5IFHU 25.7
GTEX-ZAB4-0826-SM-5LU9D 25.7
GTEX-Q734-0326-SM-48U15 25.3
GTEX-13FLV-0326-SM-5N9DJ 25.2
GTEX-X4EO-1126-SM-4QARQ 25.1
GTEX-RN64-1826-SM-48FDV 25.0
GTEX-XOTO-0826-SM-4B65O 25.0
GTEX-S33H-1626-SM-4AD68 24.8
GTEX-11ZVC-0726-SM-5FQT9 24.7
GTEX-144GM-1326-SM-5LU5E 24.7
GTEX-14A5I-1726-SM-5QGQ5 24.7
GTEX-S32W-1926-SM-4AD63 24.0
GTEX-12696-0826-SM-5EGGE 23.7
GTEX-11DXY-0526-SM-5EGGQ 23.5
GTEX-ZYY3-0626-SM-5NQ6W 23.4
GTEX-QESD-2026-SM-447BI 23.3
GTEX-UTHO-2426-SM-4JBHD 23.3
GTEX-139TS-1426-SM-5IFJD 22.8
GTEX-13NZB-0626-SM-5IFH6 22.8
GTEX-145MF-0826-SM-5QGQA 22.5
GTEX-11NUK-1226-SM-5P9GM 22.4
GTEX-139TU-0826-SM-5IJFG 22.4
GTEX-XBEC-1526-SM-4AT68 22.4
GTEX-11WQC-0726-SM-5EQMR 22.2
GTEX-13QJC-0726-SM-5RQJK 22.1
GTEX-ZTPG-1426-SM-51MT3 22.1
GTEX-147F4-1426-SM-5LUA8 21.7
GTEX-Y5LM-0426-SM-4VBRO 21.6
GTEX-139YR-0226-SM-5IFEM 21.4
GTEX-RNOR-1426-SM-48FDJ 21.2
GTEX-U3ZN-0226-SM-3DB8D 21.1
GTEX-ZVT3-1626-SM-5GU66 21.0
GTEX-11ZTS-1426-SM-5EQMM 20.9
GTEX-RU72-1426-SM-46MUF 20.9
GTEX-SJXC-1226-SM-4DM78 20.8
GTEX-131XE-0326-SM-5LZVO 20.4
GTEX-13SLX-1226-SM-5S2Q6 20.1
GTEX-147JS-1126-SM-5RQIW 20.0
GTEX-12WSD-1426-SM-5GCN9 19.7
GTEX-13N11-0926-SM-5IJG2 19.5
GTEX-12WSG-0626-SM-5FQTQ 19.1
GTEX-13O3O-1826-SM-5IFGW 18.9
GTEX-13OW6-2626-SM-5IFF2 18.4
GTEX-1399T-0826-SM-5IFES 18.1
GTEX-12WSL-0226-SM-5CVMJ 17.7
GTEX-14C38-1526-SM-5RQJ7 17.7
GTEX-11OF3-0726-SM-5BC4Z 17.1
GTEX-131YS-1626-SM-5HL6C 16.8
GTEX-13112-1426-SM-5EGH8 16.4
GTEX-1269C-0626-SM-5FQSS 16.2
GTEX-12WSI-0226-SM-5GCNA 15.7
GTEX-QEG4-1826-SM-4R1JN 15.6
GTEX-T6MN-1226-SM-3NMA5 15.4
GTEX-145MO-2326-SM-5NQ9K 15.3
GTEX-131XH-0626-SM-5LZWH 14.8
GTEX-12KS4-1326-SM-5LUB3 14.5
GTEX-11GSP-0626-SM-5986T 14.2
GTEX-11NV4-1326-SM-5HL6V 14.1
GTEX-145LU-1326-SM-5LU9N 14.1
GTEX-13VXU-0926-SM-5IFFH 14.0
GTEX-Q2AG-1126-SM-48U1P 13.9
GTEX-WZTO-0626-SM-4PQYY 13.2
GTEX-13FTZ-0726-SM-5IFFY 12.8
GTEX-11ZUS-2526-SM-59872 12.4
GTEX-YECK-1926-SM-4W21H 11.0
GTEX-13NYB-1026-SM-5IFH3 10.1
GTEX-12ZZZ-1326-SM-59HKW 6.9
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

153.4

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 153.4
FF:10018-101C9 64,69,70 years, mixed 153.4

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