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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:179.1TPM
GTEx:78.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:High
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA001097

 

Endothelial cells

Low  

Glial cells

High  

Neuronal cells

High  

Neuropil

Medium  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

179.1

N/A Male, age 5
Sample 1
TPM: 179.5
overview Female, age 40
Sample 2
TPM: 178.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 179.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

78.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 81.7
Samples: 114

Max RPKM: 122
Min RPKM: 35.6
Std RPKM: 14.2
Median RPKM: 82.9
GTEX-1117F-3226-SM-5N9CT 122.0
GTEX-13FHO-3026-SM-5J1O9 113.3
GTEX-139T8-1026-SM-5J2MC 113.0
GTEX-13OW8-2826-SM-5L3GC 112.9
GTEX-13JUV-2926-SM-5LZX7 107.0
GTEX-11OC5-0726-SM-5P9JK 106.6
GTEX-QVJO-1426-SM-2S1QY 103.6
GTEX-NPJ7-2726-SM-2I3FT 101.2
GTEX-ZYFD-3026-SM-5E44C 98.6
GTEX-11TTK-2926-SM-5PNYP 97.1
GTEX-1192X-3126-SM-5N9BY 97.0
GTEX-13OVJ-2826-SM-5L3GW 97.0
GTEX-1445S-3026-SM-5O9BR 96.8
GTEX-NPJ8-1526-SM-2D7VU 95.6
GTEX-QVUS-2826-SM-3GADB 95.1
GTEX-13O3Q-2926-SM-5KM45 94.0
GTEX-11NV4-2126-SM-5N9DS 93.6
GTEX-13SLX-3126-SM-5S2Q5 93.5
GTEX-13OW6-3026-SM-5J2MI 93.3
GTEX-WHSE-3026-SM-3P5ZH 92.6
GTEX-14A5I-2926-SM-5Q5CQ 92.3
GTEX-Y111-2726-SM-4TT3N 92.0
GTEX-12ZZX-2926-SM-5GCOQ 91.2
GTEX-11GSO-2926-SM-5HL73 91.1
GTEX-12ZZW-2926-SM-5LZUP 91.1
GTEX-144FL-3026-SM-5O99C 90.3
GTEX-YJ89-3026-SM-5IFJI 89.8
GTEX-12126-1026-SM-5P9JJ 89.2
GTEX-131XW-3126-SM-5LZUC 89.1
GTEX-WL46-2926-SM-3LK82 89.0
GTEX-YFC4-3126-SM-5PNV6 88.4
GTEX-13FHP-3026-SM-5IJBS 88.1
GTEX-XLM4-3026-SM-4AT6L 88.1
GTEX-ZUA1-3026-SM-59HJC 87.6
GTEX-13NYS-3126-SM-5KLYV 87.3
GTEX-ZVT3-3026-SM-5E43N 87.2
GTEX-11ONC-2926-SM-5P9JM 87.0
GTEX-14ASI-3026-SM-5S2PN 87.0
GTEX-13X6K-2926-SM-5Q5D5 86.6
GTEX-Z93S-2926-SM-57WB9 86.5
GTEX-WVLH-3026-SM-3MJG9 85.9
GTEX-OXRN-2426-SM-2I5EQ 85.8
GTEX-14BMV-3026-SM-5S2PQ 85.6
GTEX-13VXU-2926-SM-5LU5C 85.5
GTEX-X585-3026-SM-46MWF 85.5
GTEX-13FLW-1426-SM-5K7YE 85.3
GTEX-144GL-3026-SM-5Q5CW 84.9
GTEX-11PRG-2926-SM-5987A 84.6
GTEX-XOTO-3026-SM-4B65M 84.4
GTEX-WWYW-3126-SM-3NB39 84.1
GTEX-11EMC-3226-SM-5EGKW 84.0
GTEX-145LS-3126-SM-5Q5BY 83.9
GTEX-1313W-3126-SM-5LZUI 83.6
GTEX-ZE7O-3126-SM-5HL5X 83.3
GTEX-13OVH-3026-SM-5MR4N 83.2
GTEX-13NYC-2826-SM-5K7WR 83.0
GTEX-TSE9-3026-SM-3DB76 83.0
GTEX-145MH-3026-SM-5Q5DZ 82.7
GTEX-11WQK-3026-SM-5EQL6 82.4
GTEX-Q2AG-2926-SM-2HMJ3 82.3
GTEX-145MF-2726-SM-5O995 81.9
GTEX-11GSP-3226-SM-5986O 81.7
GTEX-147GR-3026-SM-5S2ML 81.5
GTEX-12WSC-3026-SM-5GCNF 81.3
GTEX-13O3O-3126-SM-5KM3H 80.8
GTEX-T6MN-2626-SM-32PMQ 80.7
GTEX-11NUK-2926-SM-5A5MD 80.5
GTEX-QDT8-2926-SM-32PKC 80.1
GTEX-RU72-3026-SM-5SI7Y 80.0
GTEX-11ZUS-2926-SM-5FQSL 79.9
GTEX-13FXS-3126-SM-5J2NN 79.8
GTEX-11DXY-3226-SM-5GIDE 79.4
GTEX-131YS-3126-SM-5KLYT 79.1
GTEX-T5JC-2426-SM-3NMDB 78.9
GTEX-12ZZY-3026-SM-5GCOU 78.5
GTEX-132Q8-3026-SM-5PNVG 77.7
GTEX-T2IS-3026-SM-32QPM 77.7
GTEX-12WSD-3126-SM-5HL7P 77.3
GTEX-RNOR-2326-SM-2TF4I 77.2
GTEX-QMR6-1426-SM-32PLA 76.8
GTEX-13NYB-3026-SM-5IJD7 76.4
GTEX-Y8DK-0826-SM-4TT3T 76.1
GTEX-13X6J-3026-SM-5Q5CU 75.8
GTEX-11DXW-1126-SM-5H12Q 75.7
GTEX-PWO3-0926-SM-2I5EY 75.6
GTEX-11EI6-3026-SM-5GZZO 75.4
GTEX-145MG-3026-SM-5RQJA 74.8
GTEX-WZTO-2926-SM-3NM9I 74.2
GTEX-R55F-1326-SM-5S2V4 74.1
GTEX-ZAK1-3026-SM-5S2MJ 73.7
GTEX-111FC-3126-SM-5GZZ2 73.4
GTEX-117XS-3026-SM-5N9CA 73.4
GTEX-11GS4-3126-SM-5A5LH 72.1
GTEX-1128S-2726-SM-5H12C 72.0
GTEX-1399T-3026-SM-5KLZC 70.2
GTEX-13QIC-2926-SM-5J2NF 69.8
GTEX-13OW7-3026-SM-5L3GY 69.2
GTEX-ZAJG-3126-SM-5HL9J 68.7
GTEX-13S7M-3126-SM-5RQJQ 68.4
GTEX-X4XX-3026-SM-3NMB2 68.2
GTEX-N7MT-1126-SM-5SI7V 68.1
GTEX-13G51-3026-SM-5IJB8 67.8
GTEX-13JVG-3126-SM-5L3FH 67.7
GTEX-PVOW-2526-SM-2XCF7 64.5
GTEX-12ZZZ-3026-SM-5BC67 63.7
GTEX-13PVQ-3026-SM-5SI93 57.3
GTEX-12WSH-3026-SM-5CVNI 55.5
GTEX-ZZPT-3026-SM-5GZXH 53.5
GTEX-UTHO-3026-SM-3GAFB 53.2
GTEX-12WSA-2926-SM-5EQ4D 52.9
GTEX-13PL6-3126-SM-5LUAR 52.8
GTEX-13IVO-2926-SM-5L3CZ 50.9
GTEX-11O72-2926-SM-5BC4V 35.6
GTEX-11OF3-2926-SM-5HL78 35.6
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 75.3
Samples: 108

Max RPKM: 122.2
Min RPKM: 30
Std RPKM: 14.9
Median RPKM: 76.7
GTEX-13FHO-0011-R10b-SM-5J2MM 122.2
GTEX-13OW8-0011-R10a-SM-5L3H6 110.7
GTEX-13JUV-0011-R10b-SM-5LZXR 107.8
GTEX-13OVJ-0011-R10b-SM-5L3HT 99.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 99.1
GTEX-13SLW-0011-R10a-SM-5S2UI 96.6
GTEX-11H98-0011-R10b-SM-5NQ98 95.9
GTEX-131XH-0011-R10a-SM-5EGLJ 94.6
GTEX-1445S-0011-R10a-SM-5PNWB 94.1
GTEX-13OVL-0011-R10a-SM-5L3GS 94.0
GTEX-Q2AG-0011-R10A-SM-2HMLA 93.6
GTEX-TSE9-0011-R10A-SM-3DB7O 91.7
GTEX-13X6K-0011-R10a-SM-5P9JR 91.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 89.1
GTEX-147F4-0011-R10b-SM-5S2WC 88.1
GTEX-13FXS-0011-R10a-SM-5J2MA 87.0
GTEX-Z93S-0011-R10a-SM-4RGNM 86.4
GTEX-147GR-0011-R10b-SM-5S2UM 86.1
GTEX-13G51-0011-R10b-SM-5LZYF 85.6
GTEX-T5JC-0011-R10A-SM-32PM2 85.6
GTEX-12WSM-0011-R10a-SM-5DUWV 85.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 85.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 85.2
GTEX-YJ89-0011-R10a-SM-4SOK9 85.2
GTEX-N7MS-0011-R10A-SM-2HMJK 84.4
GTEX-XLM4-0011-R10A-SM-4AT5P 84.3
GTEX-YFC4-0011-R10a-SM-4SOK5 84.1
GTEX-145MH-0011-R10b-SM-5PNUK 83.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 83.3
GTEX-NL3H-0011-R10A-SM-2I3E9 82.8
GTEX-12WSE-0011-R10b-SM-5P9JV 82.7
GTEX-13S7M-0011-R10b-SM-5PNZB 82.7
GTEX-ZF28-0011-R10a-SM-4WWEH 82.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 82.2
GTEX-N7MT-0011-R10A-SM-2I3E1 82.0
GTEX-13JVG-0011-R10b-SM-5KM2P 81.5
GTEX-145MG-0011-R10a-SM-5PNWG 81.0
GTEX-NL4W-0011-R10A-SM-2I3DY 81.0
GTEX-12126-0011-R10b-SM-5BC6T 80.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 80.3
GTEX-139TS-0011-R10a-SM-5K7TU 80.3
GTEX-145LS-0011-R10a-SM-5PNUQ 80.2
GTEX-ZXG5-0011-R10a-SM-57WDD 80.0
GTEX-13OW6-0011-R10a-SM-5L3HE 79.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 78.7
GTEX-WVLH-0011-R10A-SM-3MJFM 78.7
GTEX-11WQK-0011-R10a-SM-5BC6R 78.4
GTEX-Y8DK-0011-R10A-SM-4SOK1 78.2
GTEX-P44H-0011-R10A-SM-2XCEK 78.0
GTEX-ZVT3-0011-R10b-SM-57WB6 77.9
GTEX-131YS-0011-R10b-SM-5EQ5N 77.8
GTEX-12WSF-0011-R10a-SM-5LZVH 77.6
GTEX-13O3Q-0011-R10b-SM-5KM39 77.0
GTEX-X585-0011-R10A-SM-46MUY 76.9
GTEX-14ASI-0011-R10b-SM-5S2VZ 76.6
GTEX-11WQC-0011-R10a-SM-57WCT 76.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC 76.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 76.2
GTEX-WL46-0011-R10A-SM-3MJFQ 76.1
GTEX-WZTO-0011-R10B-SM-4E3KB 75.9
GTEX-X4XX-0011-R10B-SM-46MWO 75.8
GTEX-13X6I-0011-R10a-SM-5PNWI 75.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 75.3
GTEX-11GSP-0011-R10a-SM-5NQ7J 75.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 74.9
GTEX-12WSC-0011-R10a-SM-5GU57 74.7
GTEX-13NYS-0011-R10a-SM-5MR4S 72.5
GTEX-OXRN-0011-R10A-SM-2I5GC 72.4
GTEX-14BIL-0011-R10a-SM-5SI75 72.1
GTEX-12WSD-0011-R10b-SM-5GU79 71.7
GTEX-14BIN-0011-R10a-SM-5S2UA 71.5
GTEX-1313W-0011-R10b-SM-5DUXA 71.4
GTEX-13QJC-0011-R10a-SM-5SI63 71.0
GTEX-12ZZY-0011-R10b-SM-5HL7W 70.6
GTEX-S7SE-0011-R10A-SM-2XCDF 70.4
GTEX-13QIC-0011-R10a-SM-5O9C7 69.8
GTEX-13FLW-0011-R10b-SM-5LZZF 69.6
GTEX-T6MN-0011-R10A-SM-32QP7 69.4
GTEX-14753-0011-R10b-SM-5S2WE 68.2
GTEX-WWYW-0011-R10A-SM-3NB35 67.2
GTEX-1477Z-0011-R10b-SM-5S2RF 67.1
GTEX-13O3O-0011-R10a-SM-5LUA9 66.4
GTEX-13CZV-0011-R10b-SM-5LZYD 66.2
GTEX-XMD1-0011-R10A-SM-4AT4A 66.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 66.1
GTEX-13OW7-0011-R10a-SM-5L3H3 66.0
GTEX-13N1W-0011-R10b-SM-5MR4H 65.2
GTEX-13X6J-0011-R10b-SM-5PNWA 64.4
GTEX-QMR6-0011-R10A-SM-32PKO 63.4
GTEX-13NYB-0011-R10a-SM-5KM43 62.8
GTEX-QVUS-0011-R10A-SM-3GIK3 61.8
GTEX-13SLX-0011-R10a-SM-5P9HV 60.9
GTEX-ZV68-0011-R10a-SM-51MT7 60.9
GTEX-ZUA1-0011-R10a-SM-51MT6 60.4
GTEX-145LU-0011-R10a-SM-5PNWJ 59.8
GTEX-QDT8-0011-R10A-SM-32PKG 57.4
GTEX-X4EP-0011-R10B-SM-4QASJ 55.9
GTEX-X261-0011-R10B-SM-4E3JT 54.4
GTEX-12WSH-0011-R10a-SM-5LZUS 53.7
GTEX-13NZA-0011-R10b-SM-5KM54 51.8
GTEX-13N2G-0011-R10a-SM-5MR34 50.0
GTEX-12WSA-0011-R10b-SM-5P9ET 49.8
GTEX-11ZUS-0011-R10b-SM-5BC79 47.0
GTEX-RVPU-0011-R10A-SM-2XCAH 46.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 44.9
GTEX-OXRO-0011-R10A-SM-2I5EH 38.9
GTEX-131XW-0011-R10a-SM-5DUVA 37.8
GTEX-13IVO-0011-R10a-SM-5LZY3 30.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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