We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ACO2
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:27.1TPM
GTEx:16.1RPKM
FANTOM5:115.5Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:High
Hepatocytes:Low
 

Antibody staining

Antibody HPA001097

 

Bile duct cells

High  

Hepatocytes

Low  
 
 
 

LIVER - HPA RNA-seq

Average TPM

27.1

N/A Female, age 60
Sample 1
TPM: 36.3
overview Male, age 54
Sample 2
TPM: 31.6
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 31.7
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 10.5
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 12.0
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 27.9
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 26.4
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 31.5
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 21.6
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 42.0
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

16.1

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 16.1
Samples: 119

Max RPKM: 65.1
Min RPKM: 3.5
Std RPKM: 7.9
Median RPKM: 14.2
GTEX-13N11-0926-SM-5IJG2 65.1
GTEX-13113-1326-SM-5GCOI 37.7
GTEX-S32W-1926-SM-4AD63 34.5
GTEX-R53T-0326-SM-48FEC 31.6
GTEX-S4Z8-0526-SM-4AD4T 28.6
GTEX-QDVN-0826-SM-48TZ2 28.3
GTEX-Y5LM-0426-SM-4VBRO 28.2
GTEX-11EQ9-0526-SM-5A5JZ 27.5
GTEX-Q734-0326-SM-48U15 26.7
GTEX-QESD-2026-SM-447BI 25.6
GTEX-12WSG-0626-SM-5FQTQ 25.1
GTEX-ZTPG-1426-SM-51MT3 25.1
GTEX-OOBJ-0826-SM-3NB2K 24.9
GTEX-ZF29-2026-SM-4WWB7 24.4
GTEX-1399R-1226-SM-5P9GF 23.8
GTEX-1497J-0726-SM-5Q5D1 23.7
GTEX-13FTW-1126-SM-5J2NV 23.5
GTEX-13PVR-0126-SM-5S2PY 23.5
GTEX-UPIC-0926-SM-4IHLV 23.0
GTEX-QEL4-1226-SM-447A4 22.9
GTEX-13SLX-1226-SM-5S2Q6 22.3
GTEX-X4EO-1126-SM-4QARQ 22.0
GTEX-RM2N-1926-SM-48FCU 21.8
GTEX-WFON-1726-SM-4LVMQ 21.6
GTEX-Z9EW-0426-SM-5CVM9 21.6
GTEX-14C38-1526-SM-5RQJ7 21.3
GTEX-XOTO-0826-SM-4B65O 21.3
GTEX-145MF-0826-SM-5QGQA 21.1
GTEX-146FH-1526-SM-5NQBU 21.1
GTEX-14E1K-0326-SM-5S2PE 21.0
GTEX-ZZPU-0426-SM-5GZYH 21.0
GTEX-ZAB5-0426-SM-5CVMI 20.9
GTEX-ZYY3-0626-SM-5NQ6W 20.6
GTEX-QV44-0326-SM-4R1KD 20.2
GTEX-YB5E-0326-SM-5IFHU 20.2
GTEX-ZF2S-3026-SM-4WWCH 20.0
GTEX-ZVP2-0626-SM-51MSO 19.3
GTEX-X3Y1-2726-SM-4PQZH 19.1
GTEX-QEG4-1826-SM-4R1JN 18.3
GTEX-12WSL-0226-SM-5CVMJ 17.6
GTEX-P78B-1326-SM-3P611 17.6
GTEX-11DXZ-0126-SM-5EGGY 17.4
GTEX-PX3G-0826-SM-48TZS 17.1
GTEX-139TU-0826-SM-5IJFG 16.6
GTEX-147F4-1426-SM-5LUA8 16.5
GTEX-14AS3-0126-SM-5Q5F4 16.5
GTEX-139YR-0226-SM-5IFEM 16.3
GTEX-WYVS-1926-SM-4PQZ2 16.3
GTEX-YEC4-0826-SM-5P9FV 16.1
GTEX-U3ZN-0226-SM-3DB8D 16.0
GTEX-1212Z-0226-SM-59HLF 15.8
GTEX-WQUQ-1926-SM-4OOSA 15.7
GTEX-ZPU1-0826-SM-57WG2 15.7
GTEX-RWSA-1426-SM-47JXA 15.4
GTEX-14753-1626-SM-5NQ9L 14.9
GTEX-131XE-0326-SM-5LZVO 14.8
GTEX-TKQ2-1726-SM-4DXUP 14.8
GTEX-144GM-1326-SM-5LU5E 14.7
GTEX-ZAB4-0826-SM-5LU9D 14.5
GTEX-132NY-0926-SM-5P9G3 14.2
GTEX-13NZ9-1326-SM-5MR3V 14.1
GTEX-147JS-1126-SM-5RQIW 14.0
GTEX-VUSG-0126-SM-4KL1X 13.8
GTEX-X4EP-1026-SM-4QAS5 13.6
GTEX-12WSD-1426-SM-5GCN9 13.5
GTEX-RTLS-1326-SM-46MUN 13.5
GTEX-14DAQ-1726-SM-5S2R2 13.3
GTEX-UTHO-2426-SM-4JBHD 13.3
GTEX-ZVT4-0626-SM-5E45T 13.2
GTEX-UPK5-1426-SM-4JBHH 12.7
GTEX-12WSI-0226-SM-5GCNA 12.6
GTEX-REY6-1226-SM-48FDR 12.4
GTEX-13OW6-2626-SM-5IFF2 12.3
GTEX-Y5V5-0926-SM-4VBPZ 12.3
GTEX-12WSM-0726-SM-5GCOW 12.1
GTEX-145MO-2326-SM-5NQ9K 12.0
GTEX-YFC4-1526-SM-5IFJS 11.9
GTEX-139TS-1426-SM-5IFJD 11.7
GTEX-RU72-1426-SM-46MUF 11.7
GTEX-1399T-0826-SM-5IFES 11.6
GTEX-RN64-1826-SM-48FDV 11.2
GTEX-X4XY-1626-SM-46MVN 11.2
GTEX-T6MN-1226-SM-3NMA5 10.8
GTEX-13FLV-0326-SM-5N9DJ 10.7
GTEX-14A5I-1726-SM-5QGQ5 10.7
GTEX-12KS4-1326-SM-5LUB3 10.6
GTEX-XBEC-1526-SM-4AT68 10.5
GTEX-ZYT6-0626-SM-5E45V 10.5
GTEX-WZTO-0626-SM-4PQYY 10.4
GTEX-11ZVC-0726-SM-5FQT9 10.3
GTEX-12696-0826-SM-5EGGE 10.3
GTEX-ZVT3-1626-SM-5GU66 10.3
GTEX-11OF3-0726-SM-5BC4Z 10.2
GTEX-131YS-1626-SM-5HL6C 10.1
GTEX-1269C-0626-SM-5FQSS 9.7
GTEX-11WQC-0726-SM-5EQMR 9.6
GTEX-11ZTS-1426-SM-5EQMM 9.6
GTEX-13N2G-0926-SM-5IFGJ 9.6
GTEX-SJXC-1226-SM-4DM78 9.6
GTEX-13FTZ-0726-SM-5IFFY 9.4
GTEX-13QJC-0726-SM-5RQJK 9.4
GTEX-S33H-1626-SM-4AD68 9.2
GTEX-11DXY-0526-SM-5EGGQ 9.1
GTEX-13NYB-1026-SM-5IFH3 9.1
GTEX-11NV4-1326-SM-5HL6V 8.9
GTEX-11NUK-1226-SM-5P9GM 8.8
GTEX-13O3O-1826-SM-5IFGW 8.8
GTEX-YECK-1926-SM-4W21H 8.4
GTEX-13112-1426-SM-5EGH8 8.3
GTEX-11GSP-0626-SM-5986T 8.2
GTEX-13VXU-0926-SM-5IFFH 7.9
GTEX-X261-1726-SM-4PQYT 7.9
GTEX-131XH-0626-SM-5LZWH 7.8
GTEX-13NZB-0626-SM-5IFH6 7.6
GTEX-RNOR-1426-SM-48FDJ 7.0
GTEX-145LU-1326-SM-5LU9N 6.9
GTEX-Q2AG-1126-SM-48U1P 5.6
GTEX-11ZUS-2526-SM-59872 5.0
GTEX-12ZZZ-1326-SM-59HKW 3.5
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

115.5

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 115.5
FF:10018-101C9 64,69,70 years, mixed 115.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.