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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:190.4TPM
GTEx:54.2RPKM
FANTOM5:385.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA001097

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

190.4

overview Male, age 65
Sample 1
TPM: 198.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 181.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 201.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 180.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

54.2

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 54.2
Samples: 88

Max RPKM: 112.8
Min RPKM: 15.8
Std RPKM: 25.6
Median RPKM: 46.4
GTEX-111YS-1426-SM-5GID8 112.8
GTEX-ZPCL-1726-SM-57WEO 111.1
GTEX-14DAR-1426-SM-5RQIR 110.5
GTEX-ZLV1-1126-SM-4WWBW 109.1
GTEX-ZTSS-0926-SM-59865 106.7
GTEX-13D11-0726-SM-5LZZB 106.0
GTEX-YB5E-1526-SM-5IFIE 99.1
GTEX-Y9LG-1626-SM-5IFHM 95.9
GTEX-1122O-1326-SM-5H11F 93.3
GTEX-145LT-1026-SM-5LU9O 93.0
GTEX-ZYFG-2026-SM-5E43Y 91.7
GTEX-11EQ9-1326-SM-5985X 87.5
GTEX-ZVZP-1826-SM-5GZXB 82.8
GTEX-YF7O-1826-SM-5IFIU 82.5
GTEX-XUZC-1426-SM-4BRV3 79.6
GTEX-ZXES-1526-SM-5NQ95 79.0
GTEX-ZZ64-0526-SM-5GZXM 78.8
GTEX-13PL7-2626-SM-5IFH4 78.8
GTEX-11DXX-1626-SM-5H11H 78.2
GTEX-ZTX8-0526-SM-59HLD 77.9
GTEX-YEC4-1726-SM-4W21E 75.0
GTEX-XGQ4-1326-SM-4GIDU 74.4
GTEX-131XF-1326-SM-5GCMQ 73.2
GTEX-11I78-1126-SM-5A5K5 73.0
GTEX-1399S-2026-SM-5KM4B 71.6
GTEX-ZYWO-1526-SM-5SIAL 71.4
GTEX-13113-1226-SM-5EGHT 69.5
GTEX-11P7K-1626-SM-5GU63 67.1
GTEX-13FTW-2026-SM-5IJE2 63.7
GTEX-XBED-1426-SM-4AT4G 61.0
GTEX-14E6E-1626-SM-5RQI7 59.5
GTEX-WFG7-1726-SM-4LVME 59.2
GTEX-XXEK-1026-SM-4BRUW 58.2
GTEX-11P82-0826-SM-5P9GU 56.6
GTEX-11DXZ-1326-SM-5H11X 54.4
GTEX-ZA64-1226-SM-5HL7B 53.8
GTEX-Y114-1426-SM-4TT6W 53.6
GTEX-VJYA-0926-SM-4KL1N 50.0
GTEX-13O61-1326-SM-5KM31 48.3
GTEX-WEY5-1526-SM-4LMJF 48.0
GTEX-139T6-1026-SM-5IJGC 47.8
GTEX-ZEX8-1826-SM-57WBH 47.5
GTEX-WFJO-0926-SM-4LVM2 46.7
GTEX-X5EB-1626-SM-4E3IV 46.5
GTEX-133LE-1426-SM-5IFH1 46.2
GTEX-ZLFU-1526-SM-4WWBT 46.2
GTEX-ZVT2-2126-SM-5NQ93 46.0
GTEX-ZQUD-0926-SM-57WE3 45.7
GTEX-139YR-2226-SM-5IFFW 45.3
GTEX-ZVP2-1726-SM-5GU5P 43.7
GTEX-ZTPG-2626-SM-57WFX 43.5
GTEX-ZF2S-1726-SM-57WFT 43.1
GTEX-117YX-0326-SM-5GICL 42.5
GTEX-13CF3-1226-SM-5LZXN 41.8
GTEX-11NSD-1726-SM-5N9C3 41.1
GTEX-ZPIC-2326-SM-57WDW 41.0
GTEX-WQUQ-2426-SM-4MVNW 39.9
GTEX-WFG8-1626-SM-4LVMB 39.7
GTEX-WH7G-1626-SM-4LVMY 39.2
GTEX-1399R-2026-SM-5K7WN 38.2
GTEX-Y3IK-1726-SM-4YCCR 38.0
GTEX-13FH7-1226-SM-5IJFK 37.6
GTEX-13RTK-0826-SM-5Q5C6 37.5
GTEX-X15G-1426-SM-4PQZK 35.0
GTEX-111CU-1326-SM-5NQ8L 34.7
GTEX-XAJ8-0526-SM-47JYK 34.3
GTEX-11XUK-1426-SM-5EQMG 34.1
GTEX-12BJ1-1926-SM-5HL9Z 34.1
GTEX-13O21-1026-SM-5IJDU 33.0
GTEX-12WSK-1526-SM-5CVNO 32.0
GTEX-XMK1-1826-SM-4B66F 31.1
GTEX-1399U-2126-SM-5IFEZ 30.8
GTEX-ZP4G-1626-SM-57WGD 30.7
GTEX-131XG-1726-SM-5LZUR 30.5
GTEX-13111-1426-SM-5DUW3 30.5
GTEX-ZQG8-2526-SM-57WEQ 29.9
GTEX-Z9EW-0926-SM-5CVMM 29.3
GTEX-11VI4-1626-SM-5EQKO 28.9
GTEX-Y5LM-1626-SM-4VDTB 27.9
GTEX-145ME-0926-SM-5O9AR 23.8
GTEX-WRHK-1026-SM-4MVOD 22.4
GTEX-UPK5-2026-SM-4JBIM 21.2
GTEX-13OVI-1926-SM-5IJCG 20.1
GTEX-13QBU-1926-SM-5IJEW 20.0
GTEX-VUSG-1726-SM-4KKZL 19.1
GTEX-ZC5H-2326-SM-4WAYT 18.2
GTEX-1192X-2526-SM-59868 18.1
GTEX-148VJ-2226-SM-5NQ9M 15.8
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

385.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 385.4
FF:10024-101D6 15,40,85 years, mixed 385.4

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The Human Protein Atlas project is funded
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